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Port details
octave-forge-dicom Octave-forge package dicom
0.2.2_1 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port
0.2.1Version of this port present on the latest quarterly branch.
Maintainer: stephen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2011-12-26 21:32:48
Last Update: 2019-06-03 05:38:52
SVN Revision: 503347
License: GPLv3
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

This is dicom.

 Digital communications in medicine (DICOM) file io. Depends on Grassroots
 DICOM (GDCM). This package is not available in repos for all distros.
 Contributors: Judd Storrs, Kris Thielemans.

WWW: http://octave.sourceforge.net/
SVNWeb : Homepage
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (3 items)
  1. /usr/local/share/licenses/octave-forge-dicom-0.2.2_1/catalog.mk
  2. /usr/local/share/licenses/octave-forge-dicom-0.2.2_1/LICENSE
  3. /usr/local/share/licenses/octave-forge-dicom-0.2.2_1/GPLv3
  4. Collapse this list.
Dependency lines:
  • octave-forge-dicom>0:math/octave-forge-dicom

To install the port: cd /usr/ports/math/octave-forge-dicom/ && make install clean
To add the package: pkg install octave-forge-dicom

PKGNAME: octave-forge-dicom

There is no flavor information for this port.

distinfo:

TIMESTAMP = 1554603039
SHA256 (octave-forge/dicom-0.2.2.tar.gz) = 1e8ced348553b10fe75ea7ccf50ff61cd812d17bf232cfa1ba4837ae65c3867f
SIZE (octave-forge/dicom-0.2.2.tar.gz) = 177283


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. cmake : devel/cmake
  2. octave : math/octave
  3. gfortran8 : lang/gcc8
  4. gmake : devel/gmake
  5. as : devel/binutils
Runtime dependencies:
  1. octave : math/octave
  2. load-octave-pkg : math/octave-forge-base
  3. gfortran8 : lang/gcc8
Library dependencies:
  1. libgdcmCommon.so : devel/gdcm
  2. libpcre.so : devel/pcre

This port is required by:

for Run
Configuration Options
     No options to configure

USES:
fortran gmake compiler:c++14-lang

Master Sites:
  1. http://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  2. http://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  3. http://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  4. http://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  5. http://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  6. http://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  7. http://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  8. http://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  9. http://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  10. http://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  11. http://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  12. http://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  13. http://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  14. http://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  15. http://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  16. http://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  17. http://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  18. http://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  19. http://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  20. http://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  21. http://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  22. http://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  23. http://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  24. http://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  25. http://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  26. http://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  27. http://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  28. http://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  29. http://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  30. http://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  31. http://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  32. http://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  33. http://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  34. http://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  35. http://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  36. http://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  37. http://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  38. http://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  39. http://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  40. https://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  41. https://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  42. https://cytranet.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  43. https://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  44. https://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  45. https://downloads.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  46. https://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  47. https://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  48. https://excellmedia.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  49. https://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  50. https://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  51. https://freefr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  52. https://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  53. https://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  54. https://jaist.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  55. https://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  56. https://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  57. https://kent.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  58. https://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  59. https://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  60. https://nchc.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  61. https://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  62. https://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  63. https://netcologne.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  64. https://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  65. https://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  66. https://netix.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  67. https://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  68. https://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  69. https://superb-dca2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  70. https://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  71. https://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  72. https://superb-sea2.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  73. https://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  74. https://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  75. https://ufpr.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
  76. https://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases/
  77. https://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-05-08/
  78. https://vorboss.dl.sourceforge.net/project/octave/Octave%20Forge%20Packages/R2009-06-07/
Notes from UPDATING
These upgrade notes are taken from /usr/ports/UPDATING
  • 2011-06-30
    Affects: users of math/octave-forge* and benchmarks/octave-forge-benchmark
    Author: stephen@FreeBSD.org
    Reason: 
      The octave-forge* port structure has been completely redesigned.  This was
      to make them compatible with portmaster and other port installation tools.
    
      Before using the new octave-forge* ports, the old octave-forge* ports must
      be completely removed with, for example, the command:
    
      # pkg_delete "octave-forge*"
    
    

Number of commits found: 35

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
03 Jun 2019 04:38:52
Original commit files touched by this commit  0.2.2_1
Revision:503347
stephen search for other commits by this committer
- configure requires cmake to work properly.

Reported by:	pkg-fallout@
01 Jun 2019 21:59:14
Original commit files touched by this commit  0.2.2_1
Revision:503259
stephen search for other commits by this committer
- Update devel/gdcm to 3.0.0.
- Bump portrevision of dependent ports.
07 Apr 2019 02:25:26
Original commit files touched by this commit  0.2.2
Revision:498237
stephen search for other commits by this committer
- Update to 0.2.2.
- Unbreak.
10 Mar 2019 04:56:17
Original commit files touched by this commit  0.2.1_7
Revision:495225
stephen search for other commits by this committer
- Update math/octave to 5.1.0.
- Bump portrevision of unbroken octave-forge-* ports.
- Bump portrevision of math/dynare which uses library files from octave.
- Mark broken: octave-forge-(database|dicom|optim|fits|linear|linear|optim|
  parallel|signal|strings|struct|tisean|video).
- Broken optional dependencies in math/octave-forge to default to off.
- Bump portrevision of math/octave-forge.
10 Mar 2019 00:48:01
Original commit files touched by this commit  0.2.1_7
Revision:495218
stephen search for other commits by this committer
- Update devel/gdcm to 2.8.9.
- Bump portrevision for dependent ports.
16 Jan 2019 11:13:45
Original commit files touched by this commit  0.2.1_6
Revision:490472
tijl search for other commits by this committer
Fix Qt5 symbol version scripts to put the catch-all clause first.  When
a symbol matches multiple clauses the last one takes precedence.  If the
catch-all is last it captures everything.  In the case of Qt5 libraries
this caused all symbols to have a Qt_5 label while some should have
Qt_5_PRIVATE_API.  This only affects lld because GNU ld always gives the
catch-all lowest priority.

Older versions of Qt5Webengine exported some memory allocation symbols from
the bundled Chromium.  Version 5.9 stopped exporting these [1] but the
symbols were kept as weak wrappers for the standard allocation functions to
maintain binary compatibility. [2][3]  The problem is that the call to the
standard function in these weak wrappers is only resolved to the standard
function if there's a call to this standard function in other parts of
Qt5Webengine, because only then is there a non-weak symbol that takes
precedence over the weak one.  If there's no such non-weak symbol the call
(Only the first 15 lines of the commit message are shown above View all of this commit message)
12 Dec 2018 01:35:36
Original commit files touched by this commit  0.2.1_5
Revision:487272
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
12 Nov 2018 20:47:18
Original commit files touched by this commit  0.2.1_4
Revision:484822
stephen search for other commits by this committer
- Take maintainership of devel/gdcm.
- Update devel/gdcm to 2.8.8.
- Bump portrevision of dependent ports.
12 Aug 2018 02:57:04
Original commit files touched by this commit  0.2.1_3
Revision:476952
stephen search for other commits by this committer
- Update math/octave to 4.4.1.
- Bump portrevision for all octave-forge-* ports.
29 Jul 2018 22:18:46
Original commit files touched by this commit  0.2.1_2
Revision:475857
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
03 May 2018 23:42:35
Original commit files touched by this commit  0.2.1_1
Revision:468999
stephen search for other commits by this committer
- Update octave to 4.4.0.
- Either bump portrevision or mark broken for octave-forge-* ports.
- Bump port revision for octave-forge.
10 Apr 2018 01:57:22
Original commit files touched by this commit  0.2.1
Revision:466935
stephen search for other commits by this committer
- Resurrect math/octave-forge-dicom.
- Update to 0.2.1.
01 Nov 2016 22:25:00
Original commit files touched by this commit  0.1.1_8
Revision:425097
rene search for other commits by this committer
Remove expired port:
2016-11-01 math/octave-forge-dicom: Broken for more than 6 months
21 Oct 2016 12:51:41
Original commit files touched by this commit  0.1.1_8
Revision:424411  Sanity Test Failure
mat search for other commits by this committer
${RM} already has -f.

PR:		213570
Submitted by:	mat
Exp-run by:	antoine
Sponsored by:	Absolight
01 Oct 2016 10:55:41
Original commit files touched by this commit  0.1.1_8
Revision:423051
antoine search for other commits by this committer
Deprecate ports broken for more than 6 months
19 May 2016 10:44:12
Original commit files touched by this commit  0.1.1_8
Revision:415499
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-descrs, categories [g-n]*

Approved by:	portmgr blanket
01 Apr 2016 14:16:20
Original commit files touched by this commit  0.1.1_8
Revision:412348
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.

With hat:	portmgr
Sponsored by:	Absolight
13 Jan 2016 01:21:11
Original commit files touched by this commit  0.1.1_8
Revision:405980
stephen search for other commits by this committer
- Mark as broken, as it will not build with octave-4.0.0.
20 Aug 2015 18:24:57
Original commit files touched by this commit  0.1.1_8
Revision:394904
pgollucci search for other commits by this committer
remove empty pkg-plist

PR:                  201663
Submitted By:        s3erios@gmail.com
10 Sep 2014 20:50:37
Original commit files touched by this commit  0.1.1_8
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
14 Jul 2014 18:42:04
Original commit files touched by this commit  0.1.1_7
Revision:361812
bapt search for other commits by this committer
Modernize LIB_DEPENDS

With hat:	portmgr
23 Jun 2014 00:05:58
Original commit files touched by this commit  0.1.1_7
Revision:358874
stephen search for other commits by this committer
- Set license_file.
10 Mar 2014 20:55:22
Original commit files touched by this commit  0.1.1_7
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
16 Feb 2014 17:15:32
Original commit files touched by this commit  0.1.1_6
Revision:344614
tijl search for other commits by this committer
Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes".  In most cases
USE_GCC=yes has been omitted though.

Remove USE_FORTRAN handling from bsd.port.mk and bsd.gcc.mk.

Minor cleanups in some ports like USE_GMAKE, NOPORTDOCS,...

Exp-run:	bdrewery
Approved by:	portmgr (bdrewery)
12 Jan 2014 19:52:20
Original commit files touched by this commit  0.1.1_5
Revision:339538
stephen search for other commits by this committer
- Add license=GPLv3.
12 Jan 2014 16:35:23
Original commit files touched by this commit  0.1.1_5
Revision:339520
stephen search for other commits by this committer
- Implement staging for octave-forge ports.
07 Nov 2013 05:21:03
Original commit files touched by this commit  0.1.1_5
Revision:333061
stephen search for other commits by this committer
- Update GDCM_MAJ because of update to devel/gdcm.
- Bump portrevision.
26 Oct 2013 00:52:36
Original commit files touched by this commit  0.1.1_4
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 20:55:06
Original commit files touched by this commit  0.1.1_3
Revision:327746
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
math)
05 Jul 2013 20:59:44
Original commit files touched by this commit  0.1.1_3
Revision:322356
stephen search for other commits by this committer
- Remove .include <bsd.ports.pre.mk>; bsd.ports.post.mk to bsd.ports.mk;
  ${PORTSDIR} to ${.CURDIR}/../.. in the .include for bsd.octave.mk.
  This is because USE_GMAKE no longer works after .include <bsd.ports.pre.mk>.
- Trim headers.
- Clean whitespace.
- Portlint.
01 Jun 2012 05:26:28
Original commit files touched by this commit  0.1.1_3

dinoex search for other commits by this committer
- update png to 1.5.10
11 Apr 2012 02:58:30
Original commit files touched by this commit  0.1.1_2

maho search for other commits by this committer
Bump port revision of all the octave-forge ports,
since there was an API change to octave (from 3.4 to 3.6).
Now it is appropriate to bump the portrevision of every single octave-forge
port,
but a few of the ports needed further patches to make them work: ad,
communications, parallel, odepkg. The es package doesn't build so we switched
off.

Submitted by:   stephen@
Reviewed by:    maho@
02 Jan 2012 17:06:34
Original commit files touched by this commit  0.1.1_1

stephen search for other commits by this committer
- Accommodate upgrade of major version of devel/gdcm from 2.0 to 2.2.
- Bump port revision.
26 Dec 2011 21:35:09
Original commit files touched by this commit  0.1.1

stephen search for other commits by this committer
- Correct the date of creation and the email address of the creator.
26 Dec 2011 21:32:20
Original commit files touched by this commit  0.1.1

stephen search for other commits by this committer
- New port math/octave-forge-dicom.

The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

This is dicom.  Digital communications in medicine (DICOM) file io. Depends on
Grassroots DICOM (GDCM).

Number of commits found: 35

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