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Port details
py-rpy2 Python interface to the R Programming Language
3.4.5 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.4.5Version of this port present on the latest quarterly branch.
Maintainer: sunpoet@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-09-01 14:55:57
Last Update: 2021-06-14 17:40:18
Commit Hash: b81d7af
Also Listed In: python
License: GPLv2+
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}rpy2>0:math/py-rpy2@${PY_FLAVOR}
To install the port: cd /usr/ports/math/py-rpy2/ && make install clean
To add the package, run one of these commands:
  • pkg install math/py-rpy2
  • pkg install py38-rpy2
NOTE: This is a Python port. Instead of py38-rpy2 listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-rpy2
Package flavors (<flavor>: <package>)
  • py38: py38-rpy2
distinfo:
Packages (timestamps in pop-ups are UTC):
py37-rpy2
ABIlatestquarterly
FreeBSD:11:aarch64-3.3.4
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch643.4.1-
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc643.4.2_1-
 
py38-rpy2
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd643.4.53.4.5
FreeBSD:11:armv6--
FreeBSD:11:i3863.4.53.4.5
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-3.4.5
FreeBSD:12:amd643.4.53.4.5
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3863.4.53.4.5
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64-3.4.5
FreeBSD:13:amd643.4.53.4.5
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3863.4.53.4.5
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch643.4.5-
FreeBSD:14:amd643.4.5-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3863.4.5-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-cffi>=1.10.0 : devel/py-cffi@py38
  2. gfortran10 : lang/gcc10
  3. py38-setuptools>0 : devel/py-setuptools@py38
  4. python3.8 : lang/python38
  5. as : devel/binutils
Runtime dependencies:
  1. py38-cffi>=1.10.0 : devel/py-cffi@py38
  2. py38-Jinja2>=0 : devel/py-Jinja2@py38
  3. py38-pytz>=0,1,1 : devel/py-pytz@py38
  4. py38-tzlocal>=0 : devel/py-tzlocal@py38
  5. py38-pandas>=0,1 : math/py-pandas@py38
  6. py38-numpy>=0,1 : math/py-numpy@py38
  7. py38-pandas>=0,1 : math/py-pandas@py38
  8. gfortran10 : lang/gcc10
  9. py38-setuptools>0 : devel/py-setuptools@py38
  10. python3.8 : lang/python38
Library dependencies:
  1. libR.so : math/R
  2. libicui18n.so : devel/icu
  3. libpcre.so : devel/pcre
  4. libreadline.so.8 : devel/readline
This port is required by:
for Build
  1. math/sage
for Run
  1. math/sage

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/r/rpy2/
  2. https://pypi.org/packages/source/r/rpy2/
Collapse this list.
Port Moves
  • port moved here from math/rpy2 on 2018-09-01
    REASON: Moved to correct directory, this is a python library

Number of commits found: 50

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
14 Jun 2021 17:40:18
 files touched by this commit commit hash:b81d7afb808c12e6dc247989666cbb5402bcd758  3.4.5
sunpoet search for other commits by this committer
math/py-rpy2: Update to 3.4.5

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
29 Apr 2021 14:23:58
 files touched by this commit commit hash:cf31e903c085210e7a0cf85bc55f1b9c44961798  3.4.4
sunpoet search for other commits by this committer
math/py-rpy2: Add CATEGORIES=python
25 Apr 2021 20:35:32
 files touched by this commit commit hash:5e24f741ac5e13815437760f1c5c355f4174ec43  3.4.4
sunpoet search for other commits by this committer
math/py-rpy2: Update to 3.4.4

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
18 Apr 2021 05:43:53
 files touched by this commit commit hash:475c57d27f21aceac1c5749814d530fc1c302432  3.4.3
sunpoet search for other commits by this committer
math/py-rpy2: Update to 3.4.3

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
08 Apr 2021 23:33:31
 files touched by this commit commit hash:69d24a727d44d398f7357cb844386f3ec4750a4f  3.4.2_1
jbeich search for other commits by this committer
devel/icu: update to 69.1

Changes:	https://github.com/unicode-org/icu/releases/tag/release-69-1
Reported by:	GitHub (watch releases)
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  3.4.2
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
30 Mar 2021 19:20:25
Original commit files touched by this commit Revision:569590  3.4.2
sunpoet search for other commits by this committer
Remove PYTHON_PYOEXTENSION (followup of r500018 and 569588)

PYTHON_PYOEXTENSION is opt-1.pyc for Python 3.5+.
30 Jan 2021 13:29:58
Original commit files touched by this commit Revision:563407  3.4.2
sunpoet search for other commits by this committer
Update USES=python: math/py-pandas 1.2.0 requires Python 3.7+

PR:		250103
26 Jan 2021 17:36:39
Original commit files touched by this commit Revision:562819  3.4.2
sunpoet search for other commits by this committer
Update to 3.4.2

- Add NUMPY and PANDAS option
- Remove PYNUMPY

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
10 Jan 2021 23:13:55
Original commit files touched by this commit Revision:561146  3.4.1
sunpoet search for other commits by this committer
Update version requirement of RUN_DEPENDS
06 Jan 2021 20:32:14
Original commit files touched by this commit Revision:560601  3.4.1
sunpoet search for other commits by this committer
Update to 3.4.1

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
24 Dec 2020 13:46:02
Original commit files touched by this commit Revision:559094  3.3.6_1
kai search for other commits by this committer
Relax hardcoded paths to fix build with Python 3.8.7

Since r558913 Python 3.8 incorporates BPO-42604 [1] which changed the
shared libs naming scheme.  This means "EXT_SUFFIX" is now derived from
SOABI and yields with Python 3.8 to ".cpython-38.so" instead of ".so".

The affected ports strip the libaries in the "post-install" target via
hardcoded path(s) and the build fails at the end because the new extension
is not expected at this place.

Remedy the issue by adding wildcards to these paths.  This should also
prepare the ports for future Python releases, which will use the new shared
libs naming scheme.

[1] https://bugs.python.org/issue42604

PR:		252057
Reported by:	John Kennedy
Reviewed by:	fluffy, koobs
Approved by:	koobs (python)
03 Nov 2020 00:56:27
Original commit files touched by this commit Revision:553940  3.3.6_1
jbeich search for other commits by this committer
devel/icu: update to 68.1

Changes:	http://site.icu-project.org/download/68
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
Reported by:	GitHub (watch releases)
03 Oct 2020 09:50:54
Original commit files touched by this commit Revision:551285  3.3.6
sunpoet search for other commits by this committer
Update to 3.3.6

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
09 Jul 2020 18:09:12
Original commit files touched by this commit Revision:541780  3.3.5
sunpoet search for other commits by this committer
Update to 3.3.5

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
22 Jun 2020 19:36:12
Original commit files touched by this commit Revision:539921  3.3.4
sunpoet search for other commits by this committer
Update to 3.3.4

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
19 May 2020 05:16:45
Original commit files touched by this commit Revision:535813  3.3.3
sunpoet search for other commits by this committer
Update to 3.3.3

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
23 Apr 2020 20:14:49
Original commit files touched by this commit Revision:532707  3.3.2_1
jbeich search for other commits by this committer
devel/icu: update to 67.1

Changes:	http://site.icu-project.org/download/67
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
Reported by:	GitHub (watch releases)
22 Apr 2020 21:27:58
Original commit files touched by this commit Revision:532545  3.3.2
sunpoet search for other commits by this committer
Update to 3.3.2

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
21 Apr 2020 19:39:26
Original commit files touched by this commit Revision:532346  3.3.1
sunpoet search for other commits by this committer
Update to 3.3.1

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
31 Mar 2020 23:03:46
Original commit files touched by this commit Revision:530071  3.2.7
sunpoet search for other commits by this committer
Update to 3.2.7

Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
13 Mar 2020 09:47:17
Original commit files touched by this commit Revision:528343  3.2.6_1
jbeich search for other commits by this committer
devel/icu: update to 66.1

Changes:	http://site.icu-project.org/download/66
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
08 Mar 2020 21:56:37
Original commit files touched by this commit Revision:528082  3.2.6
jbeich search for other commits by this committer
Drop dependency on devel/openmp

- Drop if devel/llvm* was used as a substitute

Approved by:	yuri, rene (earlier version)
Differential Revision:	https://reviews.freebsd.org/D23020
03 Feb 2020 19:46:12
Original commit files touched by this commit Revision:525066  3.2.6
sunpoet search for other commits by this committer
Update to 3.2.6

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
27 Jan 2020 20:09:06
Original commit files touched by this commit Revision:524422  3.2.5
sunpoet search for other commits by this committer
Update to 3.2.5

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
29 Dec 2019 17:33:43
Original commit files touched by this commit Revision:521385  3.2.4
sunpoet search for other commits by this committer
Update to 3.2.4

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
28 Dec 2019 07:31:15
Original commit files touched by this commit Revision:521094  3.2.3
sunpoet search for other commits by this committer
Update to 3.2.3

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
10 Dec 2019 17:11:42
Original commit files touched by this commit Revision:519708  3.2.2_1
sunpoet search for other commits by this committer
Make devel/openmp an optional dependency

- Bump PORTREVISION for dependency change

It has been merged into base system since FreeBSD 11.3/12.1.
04 Nov 2019 16:02:01
Original commit files touched by this commit Revision:516699  3.2.2
sunpoet search for other commits by this committer
Update to 3.2.2

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
22 Oct 2019 23:34:10
Original commit files touched by this commit Revision:515225  3.2.1
sunpoet search for other commits by this committer
Update to 3.2.1

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
14 Oct 2019 12:06:13
Original commit files touched by this commit Revision:514457  3.2.0_1
pkubaj search for other commits by this committer
math/py-rpy2: fix build on GCC architectures

Use C11 compiler:
rpy2/rinterface_lib/R_API_eventloop.h:24: error: redefinition of typedef
'InputHandler'
rpy2/rinterface_lib/R_API_eventloop.h:6: error: previous declaration of
'InputHandler' was here

Approved by:	mentors (implicit approval)
03 Oct 2019 20:35:30
Original commit files touched by this commit Revision:513733  3.2.0_1
jbeich search for other commits by this committer
devel/icu: update to 65.1

Changes:	http://site.icu-project.org/download/65
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
30 Sep 2019 04:17:47
Original commit files touched by this commit Revision:513292  3.2.0
sunpoet search for other commits by this committer
Update to 3.2.0

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
21 Sep 2019 18:59:57
Original commit files touched by this commit Revision:512535  3.1.0_1
jbeich search for other commits by this committer
devel/openmp: update to 9.0.0

- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783

Changes:	http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI:		https://abi-laboratory.pro/tracker/timeline/llvm_openmp/
02 Sep 2019 22:43:39
Original commit files touched by this commit Revision:510868  3.1.0
sunpoet search for other commits by this committer
Update to 3.1.0

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
		https://github.com/rpy2/rpy2/blob/master/NEWS
26 Jul 2019 20:46:57
Original commit files touched by this commit Revision:507372  3.0.5_1
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
19 Jul 2019 17:03:13
Original commit files touched by this commit Revision:506952  3.0.5
sunpoet search for other commits by this committer
Update to 3.0.5

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
16 May 2019 23:56:38
Original commit files touched by this commit Revision:501816  3.0.4
sunpoet search for other commits by this committer
Update to 3.0.4

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
15 May 2019 15:56:07
Original commit files touched by this commit Revision:501733  3.0.3_1
sunpoet search for other commits by this committer
Fix runtime system detection

- Bump PORTREVISION for package change

PR:		237736
Submitted by:	yuri, Rainer Hurling <rhurlin@gwdg.de>
12 May 2019 20:10:20
Original commit files touched by this commit Revision:501478  3.0.3
sunpoet search for other commits by this committer
Update to 3.0.3

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
08 May 2019 16:05:53
Original commit files touched by this commit Revision:501030  3.0.2_2
jbeich search for other commits by this committer
devel/openmp: phase out

- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)

PR:		236907
Approved by:	bapt (maintainer)
Differential Revision:	https://reviews.freebsd.org/D19767
22 Apr 2019 13:16:34
Original commit files touched by this commit Revision:499638  3.0.2_1
gerald search for other commits by this committer
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl
21 Apr 2019 19:07:32
Original commit files touched by this commit Revision:499567  3.0.2
sunpoet search for other commits by this committer
Update to 3.0.2

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
09 Apr 2019 14:04:50
Original commit files touched by this commit Revision:498476  3.0.1_2
sunpoet search for other commits by this committer
Update devel/readline to 8.0

- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://tiswww.case.edu/php/chet/readline/CHANGES
PR:		236156
Exp-run by:	antoine
27 Mar 2019 21:11:09
Original commit files touched by this commit Revision:496981  3.0.1_1
jbeich search for other commits by this committer
devel/icu: update to 64.1

Changes:	http://site.icu-project.org/download/64
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
PR:		236325
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19479
04 Mar 2019 17:58:05
Original commit files touched by this commit Revision:494620  3.0.1
sunpoet search for other commits by this committer
Update to 3.0.1

- Add NO_ARCH

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
12 Dec 2018 01:35:36
Original commit files touched by this commit Revision:487272  2.9.5_1
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
03 Dec 2018 19:58:37
Original commit files touched by this commit Revision:486536  2.9.5
sunpoet search for other commits by this committer
Update to 2.9.5

- Sort RUN_DEPENDS
- Reformat pkg-descr
- Update WWW
- Take maintainership

Changes:	https://bitbucket.org/rpy2/rpy2/src/default/NEWS
23 Oct 2018 11:35:04
Original commit files touched by this commit Revision:482830  2.9.4_1
jbeich search for other commits by this committer
devel/icu: update to 63.1

Changes:	http://site.icu-project.org/download/63
ABI:		https://abi-laboratory.pro/tracker/timeline/icu4c/
PR:		232300
Exp-run by:	antoine
01 Sep 2018 14:55:42
Original commit files touched by this commit Revision:478703  2.9.4
yuri search for other commits by this committer
math/rpy2: Update 2.7.8 -> 2.9.4; Move to math/py-rpy2

Port changes:
* Add LICENSE_FILE
* Update dependencies
* Support for python-2 is dropped
* Update WWW to https

Number of commits found: 50