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Port details
snakemake Workflow management system
5.4.3 misc on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-11-27 08:05:50
Last Update: 2019-03-14 05:28:22
SVN Revision: 495687
License: MIT
Snakemake is a workflow management system that aims to reduce the complexity of
creating workflows by providing a fast and comfortable execution environment,
together with a clean and modern specification language in python style.
Snakemake workflows are essentially Python scripts extended by declarative code
to define rules. Rules describe how to create output files from input files.

WWW: https://bitbucket.org/snakemake/snakemake/src/master/
SVNWeb : Homepage : PortsMon
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (3 items)
  1. /usr/local/share/licenses/snakemake-5.4.3/catalog.mk
  2. /usr/local/share/licenses/snakemake-5.4.3/LICENSE
  3. /usr/local/share/licenses/snakemake-5.4.3/MIT
  4. Collapse this list.

Dependency line: snakemake>0:misc/snakemake


To install the port: cd /usr/ports/misc/snakemake/ && make install clean
To add the package: pkg install snakemake

PKGNAME: snakemake

There is no flavor information for this port.

distinfo:

TIMESTAMP = 1552540951
SHA256 (snakemake-5.4.3.tar.gz) = fbe197c8bf52ce78de8b0dc1ccb67beadc3f85cff2b31ea5d4ae01e19f9a0ad2
SIZE (snakemake-5.4.3.tar.gz) = 172106


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. py36-setuptools>0 : devel/py-setuptools@py36
  2. python3.6 : lang/python36
Runtime dependencies:
  1. py36-appdirs>0 : devel/py-appdirs@py36
  2. py36-configargparse>0 : devel/py-configargparse@py36
  3. py36-datrie>0 : devel/py-datrie@py36
  4. py36-docutils>0 : textproc/py-docutils@py36
  5. py36-GitPython>0 : devel/py-gitpython@py36
  6. py36-jsonschema>0 : devel/py-jsonschema@py36
  7. py36-ratelimiter>0 : devel/py-ratelimiter@py36
  8. py36-requests>0 : www/py-requests@py36
  9. py36-wrapt>0 : devel/py-wrapt@py36
  10. py36-yaml>0 : devel/py-yaml@py36
  11. py36-setuptools>0 : devel/py-setuptools@py36
  12. python3.6 : lang/python36
There are no ports dependent upon this port

Configuration Options
     No options to configure

USES:
python:3.5+

Master Sites:
  1. https://files.pythonhosted.org/packages/source/s/snakemake/
  2. https://pypi.org/packages/source/s/snakemake/

Number of commits found: 5

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
14 Mar 2019 05:28:22
Original commit files touched by this commit  5.4.3
Revision:495687
yuri search for other commits by this committer
misc/snakemake: Update 5.4.2 -> 5.4.3

Reported by:	portscout
17 Feb 2019 02:26:56
Original commit files touched by this commit  5.4.2
Revision:493144
yuri search for other commits by this committer
misc/snakemake: Update 5.4.0 -> 5.4.2

Reported by:	portscout
21 Dec 2018 04:30:34
Original commit files touched by this commit  5.4.0
Revision:487948
yuri search for other commits by this committer
misc/snakemake: Update 5.3.1 -> 5.4.0

Reported by:	portscout
08 Dec 2018 06:00:44
Original commit files touched by this commit  5.3.1
Revision:486911
yuri search for other commits by this committer
misc/snakemake: Update 5.3.0 -> 5.3.1

Reported by:	portscout
27 Nov 2018 08:05:36
Original commit files touched by this commit  5.3.0
Revision:485989
yuri search for other commits by this committer
New port: snakemake/Makefile: Workflow management system

Number of commits found: 5

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