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The cause of the slowdown was a change to the ZFS dataset. In conjunction with the database server, very little caching was being done. This combination resulted in increased disk I/O as the system churned through the database. Details in the blog post which outlines the various things which changed. Many graphs.

Sanity Test Failure
Tue, 13 Oct 2015
[ 07:45 kwm ] Original commit   Revision:399179
virtualbox-ose 4.3.30 emulators files touched by this commit  An older version of this port was marked as vulnerable. General-purpose full virtualizer for x86 hardware
virtualbox-ose-additions 4.3.30_1 emulators  Ignore files touched by this commit VirtualBox additions for FreeBSD guests
xf86-input-acecad 1.5.0_6 x11-drivers files touched by this commit X.Org acecad input driver
xf86-input-egalax 0.3_1 x11-drivers files touched by this commit eGalax touch screen input driver for X.Org
xf86-input-elographics 1.4.1_4 x11-drivers files touched by this commit X.Org elographics input driver
xf86-input-evdev 2.9.2_1 x11-drivers files touched by this commit X.Org event device input driver
xf86-input-fpit 1.4.0_6 x11-drivers files touched by this commit X.Org fpit input driver
xf86-input-hyperpen 1.4.1_4 x11-drivers files touched by this commit X.Org hyperpen input driver
xf86-input-joystick 1.6.2_4 x11-drivers files touched by this commit X.Org joystick input driver
xf86-input-keyboard 1.8.1 x11-drivers files touched by this commit X.Org keyboard input driver

(Only the first 10 of 55 ports in this commit are shown above. View all ports for this commit)
Xorg-server update to 1.17.2 with related driver updates and bumps.

Update fontproto to 2.1.3.
Update libXfont to 1.5.1.
Update xf86-input-keyboard 1.8.1.
Update xf86-input-vmmouse to 13.1.0.
Update xf86-input-void to 1.4.1.
Update xf86-video-chips to 1.2.6.
Update xf86-video-cirrus to 1.5.3.
Update xf86-video-mach64 to 6.9.5.
Update xf86-video-neomagic to 1.2.9.
Update xf86-video-r128 to 6.10.0.
Update xf86-video-s3virge to 1.10.7.
Update xf86-video-savage to 2.3.8.
Update xf86-video-siliconmotion to 1.7.8.
(Only the first 15 lines of the commit message are shown above View all of this commit message)

Sanity Test Results

x11-servers/xorg-nestserver:

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-nestserver does not
exist: 'libxcb-keysyms.so:x11/xcb-util-keysyms' on branch 'head'.

x11-servers/xephyr:

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xephyr does not exist:
'xkeyboard-config>=2.5:x11/xkeyboard-config' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xephyr does not exist:
'xkbcomp:x11/xkbcomp' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xephyr does not exist:
'libdrm.so:graphics/libdrm' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xephyr does not exist:
'libepoxy.so:graphics/libepoxy' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xephyr does not exist:
'xkeyboard-config>=2.5:x11/xkeyboard-config' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xephyr does not exist:
'xkbcomp:x11/xkbcomp' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xephyr does not exist:
'libdrm.so:graphics/libdrm' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xephyr does not exist:
'libepoxy.so:graphics/libepoxy' on branch 'head'.

x11-servers/xorg-dmx:

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-dmx does not exist:
'xkeyboard-config>=2.5:x11/xkeyboard-config' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-dmx does not exist:
'xkbcomp:x11/xkbcomp' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-dmx does not exist:
'libdrm.so:graphics/libdrm' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-dmx does not exist:
'libepoxy.so:graphics/libepoxy' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-dmx does not exist:
'xkeyboard-config>=2.5:x11/xkeyboard-config' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-dmx does not exist:
'xkbcomp:x11/xkbcomp' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-dmx does not exist:
'libdrm.so:graphics/libdrm' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-dmx does not exist:
'libepoxy.so:graphics/libepoxy' on branch 'head'.

x11-servers/xorg-server:

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-server does not
exist: 'xkeyboard-config>=2.5:x11/xkeyboard-config' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the RUN_DEPENDS of x11-servers/xorg-server does not
exist: 'xkbcomp:x11/xkbcomp' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-server does not
exist: 'libdrm.so:graphics/libdrm' on branch 'head'.

NOTE: this particular sanity test is very experimental
A port specified in the LIB_DEPENDS of x11-servers/xorg-server does not
exist: 'libepoxy.so:graphics/libepoxy' on branch 'head'.

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