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Port details
R-cran-eco R Package for Ecological Inference in 2x2 Tables
3.1.6_10 science on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.1.6_10Version of this port present on the latest quarterly branch.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2011-09-28 07:33:28
Last Update: 2021-04-06 14:31:07
Commit Hash: 305f148
People watching this port, also watch:: rubygem-amq-protocol, mkvtoolnix, bmf, radns
License: not specified in port
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • R-cran-eco>0:science/R-cran-eco
To install the port: cd /usr/ports/science/R-cran-eco/ && make install clean
To add the package, run one of these commands:
  • pkg install science/R-cran-eco
  • pkg install R-cran-eco
PKGNAME: R-cran-eco
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
R-cran-eco
ABIlatestquarterly
FreeBSD:11:aarch643.1.6_73.1.6_10
FreeBSD:11:amd643.1.6_103.1.6_10
FreeBSD:11:armv6-3.1.6_10
FreeBSD:11:i3863.1.6_103.1.6_10
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch643.1.6_73.1.6_10
FreeBSD:12:amd643.1.6_103.1.6_10
FreeBSD:12:armv63.1.6_73.1.6_10
FreeBSD:12:armv73.1.6_73.1.6_10
FreeBSD:12:i3863.1.6_103.1.6_10
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64-3.1.6_10
FreeBSD:13:aarch643.1.6_103.1.6_10
FreeBSD:13:amd643.1.6_103.1.6_10
FreeBSD:13:armv63.1.6_10-
FreeBSD:13:armv73.1.6_103.1.6_10
FreeBSD:13:i3863.1.6_103.1.6_10
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-3.1.6_10
FreeBSD:14:aarch643.1.6_10-
FreeBSD:14:amd643.1.6_10-
FreeBSD:14:armv6--
FreeBSD:14:armv73.1.6_10-
FreeBSD:14:i3863.1.6_10-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc643.1.6_10-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. R : math/R
  2. gfortran10 : lang/gcc10
  3. as : devel/binutils
Runtime dependencies:
  1. R : math/R
  2. gfortran10 : lang/gcc10
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (22 items)
Collapse this list.
  1. http://camoruco.ing.uc.edu.ve/cran/src/contrib/
  2. http://camoruco.ing.uc.edu.ve/cran/src/contrib/Archive/eco/
  3. http://cran.utstat.utoronto.ca/src/contrib/
  4. http://cran.utstat.utoronto.ca/src/contrib/Archive/eco/
  5. https://cloud.r-project.org/src/contrib/
  6. https://cloud.r-project.org/src/contrib/Archive/eco/
  7. https://cran.cnr.berkeley.edu/src/contrib/
  8. https://cran.cnr.berkeley.edu/src/contrib/Archive/eco/
  9. https://cran.csiro.au/src/contrib/
  10. https://cran.csiro.au/src/contrib/Archive/eco/
  11. https://cran.gis-lab.info/src/contrib/
  12. https://cran.gis-lab.info/src/contrib/Archive/eco/
  13. https://cran.ism.ac.jp/src/contrib/
  14. https://cran.ism.ac.jp/src/contrib/Archive/eco/
  15. https://cran.ma.imperial.ac.uk/src/contrib/
  16. https://cran.ma.imperial.ac.uk/src/contrib/Archive/eco/
  17. https://mirror.las.iastate.edu/CRAN/src/contrib/
  18. https://mirror.las.iastate.edu/CRAN/src/contrib/Archive/eco/
  19. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/
  20. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/Archive/eco/
  21. https://stat.ethz.ch/CRAN/src/contrib/
  22. https://stat.ethz.ch/CRAN/src/contrib/Archive/eco/
Collapse this list.

Number of commits found: 26

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  3.1.6_10
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
05 May 2020 16:07:54
Original commit files touched by this commit Revision:534095  3.1.6_10
jrm search for other commits by this committer
math/R: Update to version 4.0.0

Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html

Also bump PORTREVISION of ports that depend on math/R.

Submitted by:	wen (in part)
Reviewed by:	jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision:	https://reviews.freebsd.org/D24572
26 Jul 2019 20:46:57
Original commit files touched by this commit Revision:507372  3.1.6_9
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
12 Dec 2018 01:35:36
Original commit files touched by this commit Revision:487272  3.1.6_8
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
10 Mar 2018 17:46:06
Original commit files touched by this commit Revision:464084  3.1.6_7
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
18 Jun 2017 18:09:17
Original commit files touched by this commit Revision:443845  3.1.6_6
dbn search for other commits by this committer
qa: add check for NO_ARCH

If NO_ARCH is set then check that no FreeBSD elf(5) files are in $STAGEDIR.
If an elf(5) file is bundles as part of the package, but is not meant to be
run directly (i.e. the elf(5) file is a payload, and not compiled) then
those files can be added to NO_ARCH_IGNORE to avoid the check from failing,

Changes to ports:
 - Ports that have NO_ARCH set, but actually compile files have had NO_ARCH
   removed.
 - Ports that have elf(5) payloads have had those files added to
   NO_ARCH_IGNORE.
 - R-cran ports that do not set USES=cran:compiles have NO_ARCH set,

PR:		218976
Reviewed by:	antoine, mat
Approved by:	portmgr
10 Sep 2014 20:50:37
Original commit files touched by this commit Revision:367888  3.1.6_5
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
10 Mar 2014 20:55:22
Original commit files touched by this commit Revision:347809  3.1.6_4
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
01 Feb 2014 13:49:10
Original commit files touched by this commit Revision:342136  3.1.6_3
antoine search for other commits by this committer
Fix DISTNAME

Reported by:	pkg-fallout since august 2013
With hat:	portmgr
28 Dec 2013 10:28:41
Original commit files touched by this commit Revision:337846  3.1.6_3
dbn search for other commits by this committer
Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
27 Nov 2013 18:56:44
Original commit files touched by this commit Revision:335044  3.1.6_3
dbn search for other commits by this committer
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
13 Nov 2013 08:19:35
Original commit files touched by this commit Revision:333659  3.1.6_3
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
26 Oct 2013 00:52:36
Original commit files touched by this commit Revision:331644  3.1.6_2
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit Revision:327767  3.1.6_1
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
28 May 2013 15:15:06
Original commit files touched by this commit Revision:319316  3.1.6_1
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
23 May 2013 06:47:18
Original commit files touched by this commit Revision:318844  3.1.6
wen search for other commits by this committer
- Updated to 3.1.6
07 Mar 2013 04:21:35
Original commit files touched by this commit Revision:313562  3.1.5_8
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
04 Jan 2013 17:51:39
Original commit files touched by this commit Revision:309935  3.1.5_7
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
26 Jun 2012 23:57:00
Original commit files touched by this commit   3.1.5_6
bf search for other commits by this committer
update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
04 May 2012 20:56:15
Original commit files touched by this commit   3.1.5_5
bf search for other commits by this committer
- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
03 Mar 2012 16:59:36
Original commit files touched by this commit   3.1.5_4
bf search for other commits by this committer
update math/R to 2.14.2, and adjust dependent ports
18 Jan 2012 23:04:08
Original commit files touched by this commit   3.1.5_3
bf search for other commits by this committer
update math/R to 2.14.1, and adjust dependent ports
27 Nov 2011 07:02:15
Original commit files touched by this commit   3.1.5_2
bf search for other commits by this committer
update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
15 Nov 2011 20:09:02
Original commit files touched by this commit   3.1.5_1
tota search for other commits by this committer
- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
11 Oct 2011 14:19:46
Original commit files touched by this commit   3.1.5_1
bf search for other commits by this committer
update math/R to 2.13.2, and adjust dependent ports
28 Sep 2011 07:33:03
Original commit files touched by this commit   3.1.5
wen search for other commits by this committer
eco is a publicly available R package that implements the Bayesian
and likelihood methods proposed in Imai, Lu, and Strauss (2008) for
ecological inference in $2 \times 2$ tables as well as the method
of bounds introduced by Duncan and Davis (1953).

WWW: http://imai.princeton.edu/software/eco.html

Number of commits found: 26