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Port details
apbs Electrostatic and solvation properties for complex molecules
1.5.102 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 1.5.102Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2019-05-03 06:15:17
Last Update: 2019-05-03 07:15:44
SVN Revision: 500699
License: MIT
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (722 items)
  1. /usr/local/share/licenses/apbs-1.5.102/catalog.mk
  2. /usr/local/share/licenses/apbs-1.5.102/LICENSE
  3. /usr/local/share/licenses/apbs-1.5.102/MIT
  4. bin/apbs
  5. include/apbs/apbs.h
  6. include/apbs/generic/apolparm.h
  7. include/apbs/generic/bemparm.h
  8. include/apbs/generic/femparm.h
  9. include/apbs/generic/geoflowparm.h
  10. include/apbs/generic/mgparm.h
  11. include/apbs/generic/nosh.h
  12. include/apbs/generic/pbamparm.h
  13. include/apbs/generic/pbeparm.h
  14. include/apbs/generic/pbsamparm.h
  15. include/apbs/generic/vacc.h
  16. include/apbs/generic/valist.h
  17. include/apbs/generic/vatom.h
  18. include/apbs/generic/vcap.h
  19. include/apbs/generic/vclist.h
  20. include/apbs/generic/vgreen.h
  21. include/apbs/generic/vhal.h
  22. include/apbs/generic/vmatrix.h
  23. include/apbs/generic/vparam.h
  24. include/apbs/generic/vpbe.h
  25. include/apbs/generic/vstring.h
  26. include/apbs/generic/vunit.h
  27. include/apbs/mg/vgrid.h
  28. include/apbs/mg/vmgrid.h
  29. include/apbs/mg/vopot.h
  30. include/apbs/mg/vpmg.h
  31. include/apbs/mg/vpmgp.h
  32. include/apbs/pmgc/buildAd.h
  33. include/apbs/pmgc/buildBd.h
  34. include/apbs/pmgc/buildGd.h
  35. include/apbs/pmgc/buildPd.h
  36. include/apbs/pmgc/cgd.h
  37. include/apbs/pmgc/gsd.h
  38. include/apbs/pmgc/matvecd.h
  39. include/apbs/pmgc/mgcsd.h
  40. include/apbs/pmgc/mgdrvd.h
  41. include/apbs/pmgc/mgfasd.h
  42. include/apbs/pmgc/mgsubd.h
  43. include/apbs/pmgc/mikpckd.h
  44. include/apbs/pmgc/mlinpckd.h
  45. include/apbs/pmgc/mypdec.h
  46. include/apbs/pmgc/newdrvd.h
  47. include/apbs/pmgc/newtond.h
  48. include/apbs/pmgc/powerd.h
  49. include/apbs/pmgc/smoothd.h
  50. include/apbs/routines.h
  51. include/maloc/maloc.h
  52. include/maloc/maloc_base.h
  53. include/maloc/psh.h
  54. include/maloc/vcom.h
  55. include/maloc/vio.h
  56. include/maloc/vmem.h
  57. include/maloc/vmp.h
  58. include/maloc/vmpi.h
  59. include/maloc/vnm.h
  60. include/maloc/vpred.h
  61. include/maloc/vset.h
  62. include/maloc/vsh.h
  63. include/maloc/vsys.h
  64. lib/libapbs_generic.so
  65. lib/libapbs_mg.so
  66. lib/libapbs_pmgc.so
  67. lib/libapbs_routines.so
  68. lib/libmaloc.so
  69. share/apbs/doc/ChangeLog.md
  70. share/apbs/doc/README
  71. share/apbs/doc/ReleaseNotes.md
  72. share/apbs/doc/data-ontology/README.md
  73. share/apbs/doc/data-ontology/catalog-v001.xml
  74. share/apbs/doc/data-ontology/data-ontology.ttl
  75. share/apbs/doc/data-ontology/protege.sh
  76. share/apbs/doc/icons/APBS_1024.png
  77. share/apbs/doc/icons/APBS_128.png
  78. share/apbs/doc/icons/APBS_128_v2.png
  79. share/apbs/doc/icons/APBS_16.png
  80. share/apbs/doc/icons/APBS_256.png
  81. share/apbs/doc/icons/APBS_32.png
  82. share/apbs/doc/icons/APBS_512.png
  83. share/apbs/doc/icons/APBS_64.png
  84. share/apbs/doc/license/LICENSE.txt
  85. share/apbs/doc/license/license.html
  86. share/apbs/doc/release_procedure.txt
  87. share/apbs/examples/FKBP/1d7h-dmso-complex.pqr
  88. share/apbs/examples/FKBP/1d7h-dmso-mol.in
  89. share/apbs/examples/FKBP/1d7h-dmso-smol.in
  90. share/apbs/examples/FKBP/1d7h-dmso/UHBD/1d7h-min.qcd
  91. share/apbs/examples/FKBP/1d7h-dmso/UHBD/bindf.inp
  92. share/apbs/examples/FKBP/1d7h-dmso/UHBD/bindf.log
  93. share/apbs/examples/FKBP/1d7h-dmso/UHBD/bindf.oldlog
  94. share/apbs/examples/FKBP/1d7h-dmso/UHBD/dmso-min.qcd
  95. share/apbs/examples/FKBP/1d7h-dmso/UHBD/pqr2qcd
  96. share/apbs/examples/FKBP/1d7h-min.pqr
  97. share/apbs/examples/FKBP/1d7i-dss-complex.pqr
  98. share/apbs/examples/FKBP/1d7i-dss-mol.in
  99. share/apbs/examples/FKBP/1d7i-dss-smol.in
  100. share/apbs/examples/FKBP/1d7i-dss/UHBD/1d7i-min.qcd
  101. share/apbs/examples/FKBP/1d7i-dss/UHBD/bindf.inp
  102. share/apbs/examples/FKBP/1d7i-dss/UHBD/bindf.log
  103. share/apbs/examples/FKBP/1d7i-dss/UHBD/dss-min.qcd
  104. share/apbs/examples/FKBP/1d7i-min.pqr
  105. share/apbs/examples/FKBP/README.md
  106. share/apbs/examples/FKBP/dmso-min.pqr
  107. share/apbs/examples/FKBP/dss-min.pqr
  108. share/apbs/examples/README.md
  109. share/apbs/examples/actin-dimer/README.md
  110. share/apbs/examples/actin-dimer/UHBD/aheall-atom.charmm.dat
  111. share/apbs/examples/actin-dimer/UHBD/nuc.3-4.full.log
  112. share/apbs/examples/actin-dimer/UHBD/nuc.3-4.inp
  113. share/apbs/examples/actin-dimer/UHBD/prot3.pdb
  114. share/apbs/examples/actin-dimer/UHBD/prot4.pdb
  115. share/apbs/examples/actin-dimer/UHBD/single.inp
  116. share/apbs/examples/actin-dimer/UHBD/srsrf.dot
  117. share/apbs/examples/actin-dimer/apbs-mol-auto.in
  118. share/apbs/examples/actin-dimer/apbs-mol-parallel.in
  119. share/apbs/examples/actin-dimer/apbs-smol-auto.in
  120. share/apbs/examples/actin-dimer/apbs-smol-parallel.in
  121. share/apbs/examples/actin-dimer/complex.pqr
  122. share/apbs/examples/actin-dimer/mesh.m
  123. share/apbs/examples/actin-dimer/mol1.pqr
  124. share/apbs/examples/actin-dimer/mol2.pqr
  125. share/apbs/examples/alkanes/2-methylbutane.pdb
  126. share/apbs/examples/alkanes/Makefile.in
  127. share/apbs/examples/alkanes/README.md
  128. share/apbs/examples/alkanes/alkanes.in
  129. share/apbs/examples/alkanes/apbs-forces.in
  130. share/apbs/examples/alkanes/butane.pdb
  131. share/apbs/examples/alkanes/cyclohexane.pdb
  132. share/apbs/examples/alkanes/cyclopentane.pdb
  133. share/apbs/examples/alkanes/ethane.pdb
  134. share/apbs/examples/alkanes/force.result
  135. share/apbs/examples/alkanes/hexane.pdb
  136. share/apbs/examples/alkanes/isobutane.pdb
  137. share/apbs/examples/alkanes/methane.pdb
  138. share/apbs/examples/alkanes/mol.pdb
  139. share/apbs/examples/alkanes/neopentane.pdb
  140. share/apbs/examples/alkanes/parm.dat
  141. share/apbs/examples/alkanes/pentane.pdb
  142. share/apbs/examples/alkanes/propane.pdb
  143. share/apbs/examples/bem-binding-energy/1d30.in
  144. share/apbs/examples/bem-binding-energy/1d30_monomer1.in
  145. share/apbs/examples/bem-binding-energy/1d30_monomer2.in
  146. share/apbs/examples/bem-binding-energy/README.md
  147. share/apbs/examples/bem-binding-energy/test_proteins/1d30.pqr
  148. share/apbs/examples/bem-binding-energy/test_proteins/1d30_monomer1.pqr
  149. share/apbs/examples/bem-binding-energy/test_proteins/1d30_monomer2.pqr
  150. share/apbs/examples/bem-pKa/2LZT-ASH66.in
  151. share/apbs/examples/bem-pKa/2LZT-ASP66.in
  152. share/apbs/examples/bem-pKa/2LZT-noASH66.in
  153. share/apbs/examples/bem-pKa/2LZT-noASP66.in
  154. share/apbs/examples/bem-pKa/ASH66.in
  155. share/apbs/examples/bem-pKa/ASP66.in
  156. share/apbs/examples/bem-pKa/README.md
  157. share/apbs/examples/bem-pKa/test_proteins/2LZT-ASH66.pqr
  158. share/apbs/examples/bem-pKa/test_proteins/2LZT-ASP66.pqr
  159. share/apbs/examples/bem-pKa/test_proteins/2LZT-noASH66.pqr
  160. share/apbs/examples/bem-pKa/test_proteins/2LZT-noASP66.pqr
  161. share/apbs/examples/bem-pKa/test_proteins/ASH66.pqr
  162. share/apbs/examples/bem-pKa/test_proteins/ASP66.pqr
  163. share/apbs/examples/bem/1a63_NanoShaper_SES.in
  164. share/apbs/examples/bem/1a63_NanoShaper_Skin.in
  165. share/apbs/examples/bem/1a63_msms.in
  166. share/apbs/examples/bem/451c_order1.in
  167. share/apbs/examples/bem/451c_order5.in
  168. share/apbs/examples/bem/README.md
  169. share/apbs/examples/bem/test_proteins/1a63.pqr
  170. share/apbs/examples/bem/test_proteins/1ajj.pqr
  171. share/apbs/examples/bem/test_proteins/1bbl.pqr
  172. share/apbs/examples/bem/test_proteins/451c.pqr
  173. share/apbs/examples/bem/test_proteins/oneb.pqr
  174. share/apbs/examples/bem/test_proteins/twob.pqr
  175. share/apbs/examples/bem/test_proteins/twob2.pqr
  176. share/apbs/examples/born/README.md
  177. share/apbs/examples/born/apbs-apolar.in
  178. share/apbs/examples/born/apbs-forces.in
  179. share/apbs/examples/born/apbs-mol-auto.in
  180. share/apbs/examples/born/apbs-mol-fem-extmesh.in
  181. share/apbs/examples/born/apbs-mol-fem.in
  182. share/apbs/examples/born/apbs-mol-parallel.in
  183. share/apbs/examples/born/apbs-smol-auto.in
  184. share/apbs/examples/born/apbs-smol-fem.in
  185. share/apbs/examples/born/apbs-smol-parallel.in
  186. share/apbs/examples/born/apolarforces
  187. share/apbs/examples/born/ion.pqr
  188. share/apbs/examples/born/ion.xml
  189. share/apbs/examples/born/mesh.m
  190. share/apbs/examples/born/parm.dat
  191. share/apbs/examples/born/pmf.dat
  192. share/apbs/examples/born/polarforces
  193. share/apbs/examples/geoflow/1a63.in
  194. share/apbs/examples/geoflow/1a63.pqr
  195. share/apbs/examples/geoflow/README.md
  196. share/apbs/examples/geoflow/gly.pdb
  197. share/apbs/examples/geoflow/gly.pqr
  198. share/apbs/examples/geoflow/glycerol.in
  199. share/apbs/examples/geoflow/imidazole.in
  200. share/apbs/examples/geoflow/imidazole_zap.pqr
  201. share/apbs/examples/hca-bind/README.md
  202. share/apbs/examples/hca-bind/UHBD/bindf-nmap.err
  203. share/apbs/examples/hca-bind/UHBD/bindf-nmap.inp
  204. share/apbs/examples/hca-bind/UHBD/bindf-nmap.out
  205. share/apbs/examples/hca-bind/UHBD/bindf.inp
  206. share/apbs/examples/hca-bind/UHBD/bindf.log
  207. share/apbs/examples/hca-bind/UHBD/bindf.out.orig
  208. share/apbs/examples/hca-bind/UHBD/bindf1.qcd
  209. share/apbs/examples/hca-bind/UHBD/bindf2.err
  210. share/apbs/examples/hca-bind/UHBD/bindf2.qcd
  211. share/apbs/examples/hca-bind/UHBD/srsrf.dot
  212. share/apbs/examples/hca-bind/acet.pqr
  213. share/apbs/examples/hca-bind/apbs-mol.in
  214. share/apbs/examples/hca-bind/apbs-smol.in
  215. share/apbs/examples/hca-bind/complex.pqr
  216. share/apbs/examples/hca-bind/hca.pqr
  217. share/apbs/examples/hca-bind/mesh.m
  218. share/apbs/examples/helix/Apbs_dummy-TEMPLATE.in
  219. share/apbs/examples/helix/Apbs_dummy.in
  220. share/apbs/examples/helix/Apbs_solv-TEMPLATE.in
  221. share/apbs/examples/helix/Membrane-helix-0.pqr
  222. share/apbs/examples/helix/Membrane-helix-12.pqr
  223. share/apbs/examples/helix/Membrane-helix-16.pqr
  224. share/apbs/examples/helix/Membrane-helix-4.pqr
  225. share/apbs/examples/helix/Membrane-helix-8.pqr
  226. share/apbs/examples/helix/Run_membrane-helix.sh
  227. share/apbs/examples/helix/draw_membrane2.c
  228. share/apbs/examples/ion-pmf/README.md
  229. share/apbs/examples/ion-pmf/apolarforces
  230. share/apbs/examples/ion-pmf/complex.in
  231. share/apbs/examples/ion-pmf/ion-pmf.in
  232. share/apbs/examples/ion-pmf/ion-pmf.pdb
  233. share/apbs/examples/ion-pmf/parm.dat
  234. share/apbs/examples/ion-pmf/polarforces
  235. share/apbs/examples/ion-pmf/runme.sh
  236. share/apbs/examples/ion-protein/491.pqr
  237. share/apbs/examples/ion-protein/README.md
  238. share/apbs/examples/ion-protein/UHBD/491.pdb
  239. share/apbs/examples/ion-protein/UHBD/small491.e2.log
  240. share/apbs/examples/ion-protein/UHBD/small491.inp
  241. share/apbs/examples/ion-protein/UHBD/small491.log
  242. share/apbs/examples/ion-protein/UHBD/small491.pdb
  243. share/apbs/examples/ion-protein/apbs-mol-pdiel12.in
  244. share/apbs/examples/ion-protein/apbs-mol-pdiel2.in
  245. share/apbs/examples/ion-protein/apbs-smol-pdiel12.in
  246. share/apbs/examples/ion-protein/apbs-smol-pdiel2.in
  247. share/apbs/examples/ion-protein/complex.pqr
  248. share/apbs/examples/ion-protein/small491.pqr
  249. share/apbs/examples/ionize/README.md
  250. share/apbs/examples/ionize/UHBD/elec.dat.exam
  251. share/apbs/examples/ionize/UHBD/elec.inp.exam
  252. share/apbs/examples/ionize/UHBD/elec.out.orig.exam
  253. share/apbs/examples/ionize/UHBD/elec.pdb.exam
  254. share/apbs/examples/ionize/acetate.pqr
  255. share/apbs/examples/ionize/acetate.xml
  256. share/apbs/examples/ionize/acetic-acid.pqr
  257. share/apbs/examples/ionize/acetic-acid.xml
  258. share/apbs/examples/ionize/apbs-mol.in
  259. share/apbs/examples/ionize/apbs-smol.in
  260. share/apbs/examples/ionize/proton.pqr
  261. share/apbs/examples/ionize/proton.xml
  262. share/apbs/examples/membrane/memv.in
  263. share/apbs/examples/membrane/pot.pqr
  264. share/apbs/examples/membrane/readme.md
  265. share/apbs/examples/misc/README.md
  266. share/apbs/examples/misc/achbp.pqr
  267. share/apbs/examples/misc/apbs-PDB.in
  268. share/apbs/examples/misc/apbs.in
  269. share/apbs/examples/misc/fas2.pqr
  270. share/apbs/examples/misc/mache.pqr
  271. share/apbs/examples/misc/param.dat
  272. share/apbs/examples/opal/README.md
  273. share/apbs/examples/opal/actin-complex.pqr
  274. share/apbs/examples/opal/actin-dimer-para.in
  275. share/apbs/examples/opal/actin-dimer.in
  276. share/apbs/examples/opal/actin-mol1.pqr
  277. share/apbs/examples/opal/actin-mol2.pqr
  278. share/apbs/examples/opal/born.xml
  279. share/apbs/examples/pbam/1a63.in
  280. share/apbs/examples/pbam/1a63.pqr
  281. share/apbs/examples/pbam/README.md
  282. share/apbs/examples/pbam/neg_1.xyz
  283. share/apbs/examples/pbam/neg_2.xyz
  284. share/apbs/examples/pbam/neg_3.xyz
  285. share/apbs/examples/pbam/neg_charge.pqr
  286. share/apbs/examples/pbam/pos_1.xyz
  287. share/apbs/examples/pbam/pos_2.xyz
  288. share/apbs/examples/pbam/pos_3.xyz
  289. share/apbs/examples/pbam/pos_charge.pqr
  290. share/apbs/examples/pbam/toy_dynamics.in
  291. share/apbs/examples/pbam/toy_electrostatic.in
  292. share/apbs/examples/pbam/toy_energyforce.in
  293. share/apbs/examples/pbsam-barn_bars/barn_bars_electro.in
  294. share/apbs/examples/pbsam-barn_bars/barnase.pqr
  295. share/apbs/examples/pbsam-barn_bars/barstar.pqr
  296. share/apbs/examples/pbsam-gly/README.md
  297. share/apbs/examples/pbsam-gly/gly.pqr
  298. share/apbs/examples/pbsam-gly/gly.vert
  299. share/apbs/examples/pbsam-gly/gly_cg.pqr
  300. share/apbs/examples/pbsam-gly/gly_cg2.pqr
  301. share/apbs/examples/pbsam-gly/gly_dynamics.in
  302. share/apbs/examples/pbsam-gly/gly_electrostatic.in
  303. share/apbs/examples/pbsam-gly/gly_energyforce.in
  304. share/apbs/examples/pbsam-gly/msms/gly_electrostatic.in
  305. share/apbs/examples/pbsam-gly/msms/gly_msms.pqr
  306. share/apbs/examples/pbsam-gly/traj_1_1.xyz
  307. share/apbs/examples/pbsam-gly/traj_1_2.xyz
  308. share/apbs/examples/pbsam-gly/traj_2_1.xyz
  309. share/apbs/examples/pbsam-gly/traj_2_2.xyz
  310. share/apbs/examples/pka-lig/README.md
  311. share/apbs/examples/pka-lig/UHBD/README
  312. share/apbs/examples/pka-lig/UHBD/uhbd1-apo.out
  313. share/apbs/examples/pka-lig/UHBD/uhbd1-bin.out
  314. share/apbs/examples/pka-lig/UHBD/uhbd1-lig.out
  315. share/apbs/examples/pka-lig/UHBD/uhbd2-apo.out
  316. share/apbs/examples/pka-lig/UHBD/uhbd2-bin.out
  317. share/apbs/examples/pka-lig/UHBD/uhbd2-lig.out
  318. share/apbs/examples/pka-lig/apbs-mol-surf.in
  319. share/apbs/examples/pka-lig/apbs-mol-vdw.in
  320. share/apbs/examples/pka-lig/apbs-smol-surf.in
  321. share/apbs/examples/pka-lig/apbs-smol-vdw.in
  322. share/apbs/examples/pka-lig/bx6_7_apo_apbs.pqr
  323. share/apbs/examples/pka-lig/bx6_7_bin_apbs.pqr
  324. share/apbs/examples/pka-lig/bx6_7_lig_apbs.pqr
  325. share/apbs/examples/point-pmf/README.md
  326. share/apbs/examples/point-pmf/apbs.in
  327. share/apbs/examples/point-pmf/complex-0_1.in
  328. share/apbs/examples/point-pmf/complex-0_1.pqr
  329. share/apbs/examples/point-pmf/complex-0_2.in
  330. share/apbs/examples/point-pmf/complex-0_2.pqr
  331. share/apbs/examples/point-pmf/complex-0_3.in
  332. share/apbs/examples/point-pmf/complex-0_3.pqr
  333. share/apbs/examples/point-pmf/complex-0_4.in
  334. share/apbs/examples/point-pmf/complex-0_4.pqr
  335. share/apbs/examples/point-pmf/energy.dat
  336. share/apbs/examples/point-pmf/mol0.pqr
  337. share/apbs/examples/point-pmf/mol1.pqr
  338. share/apbs/examples/point-pmf/mol2.pqr
  339. share/apbs/examples/point-pmf/mol3.pqr
  340. share/apbs/examples/point-pmf/mol4.pqr
  341. share/apbs/examples/point-pmf/point-pmf-0.in
  342. share/apbs/examples/point-pmf/runme.sh
  343. share/apbs/examples/protein-rna/Makefile.am
  344. share/apbs/examples/protein-rna/Makefile.in
  345. share/apbs/examples/protein-rna/PDB/model_outBoxB19.pdb
  346. share/apbs/examples/protein-rna/PDB/model_outNB.pdb
  347. share/apbs/examples/protein-rna/PDB/model_outNpep.pdb
  348. share/apbs/examples/protein-rna/README.md
  349. share/apbs/examples/protein-rna/apbs_unix_dx.py
  350. share/apbs/examples/protein-rna/apbs_win_dx.py
  351. share/apbs/examples/protein-rna/dxmath.txt
  352. share/apbs/examples/protein-rna/fit.py
  353. share/apbs/examples/protein-rna/model_outBoxB19.pqr
  354. share/apbs/examples/protein-rna/model_outNB.pqr
  355. share/apbs/examples/protein-rna/model_outNpep.pqr
  356. share/apbs/examples/protein-rna/postprocess.sh
  357. share/apbs/examples/protein-rna/run_apdx_files.sh
  358. share/apbs/examples/protein-rna/template.txt
  359. share/apbs/examples/protein-rna/test.sh
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  408. share/apbs/tools/github/getReleases.sh
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  414. share/apbs/tools/matlab/MAPBS/License.txt
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  575. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_3/read_inm.m
  576. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/BoundaryCondition.m
  577. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/BuildA.m
  578. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/comparison.m
  579. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/comparison_reaction_field.m
  580. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/data_parse.m
  581. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/discretization.m
  582. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/dx_export.m
  583. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/gridinf.m
  584. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/main.m
  585. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_4/read_inm.m
  586. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/BoundaryCondition.m
  587. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/BuildA.m
  588. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/MAPBS.m
  589. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/MATLAB_PB_SOLVER_5.pdf
  590. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/MATLAB_PB_SOLVER_5.tex
  591. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/Readme.txt
  592. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/centerofgrid.m
  593. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/comparison.m
  594. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/comparison_reaction_field.m
  595. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/data_parse.m
  596. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/discretization.m
  597. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/dx_export.m
  598. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/fbc.m
  599. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/gridinf.m
  600. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/parameters.m
  601. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_5/read_inm.m
  602. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/BoundaryCondition.m
  603. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/BuildA.m
  604. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MAPBS.m
  605. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_APBS.fig
  606. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_APBS.m
  607. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_APBS_FOCUS.fig
  608. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_APBS_FOCUS.m
  609. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_PB_SOLVER_6.pdf
  610. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_PB_SOLVER_6.tex
  611. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/MATLAB_PB_SOLVER_AND_GUI.pdf
  612. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/Readme.txt
  613. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/centerofgrid.m
  614. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/comparison.m
  615. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/comparison_pot.fig
  616. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/comparison_pot.m
  617. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/comparison_reaction_field.m
  618. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/data_parse.m
  619. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/discretization.m
  620. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/dx_export.m
  621. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/energy.m
  622. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/fbc.m
  623. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/gridinf.m
  624. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/inmcreator.fig
  625. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/inmcreator.m
  626. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/mapbs_comparison.m
  627. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/parameters.m
  628. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_6/read_inm.m
  629. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/BoundaryCondition.m
  630. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/BuildA.m
  631. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MAPBS.m
  632. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MATLAB_APBS.fig
  633. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MATLAB_APBS.m
  634. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MATLAB_APBS_FOCUS.fig
  635. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MATLAB_APBS_FOCUS.m
  636. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/MATLAB_PB_SOLVER_AND_GUI.pdf
  637. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/centerofgrid.m
  638. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/comparison_pot.fig
  639. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/comparison_pot.m
  640. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/data_parse.m
  641. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/discretization.m
  642. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/dx_export.m
  643. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/energy.m
  644. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/fbc.m
  645. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/gridinf.m
  646. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/mapbs_comparison.m
  647. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/parameters.m
  648. share/apbs/tools/matlab/solver/MATLAB_PB_SOLVER_7/read_inm.m
  649. share/apbs/tools/matlab/solver/README
  650. share/apbs/tools/matlab/solver/born-ion-model-example.pdf
  651. share/apbs/tools/matlab/solver/born-ion-model-example.tex
  652. share/apbs/tools/matlab/solver/two-ions-model-example.pdf
  653. share/apbs/tools/matlab/solver/two-ions-model-example.tex
  654. share/apbs/tools/mesh/analysis.c
  655. share/apbs/tools/mesh/benchmark.c
  656. share/apbs/tools/mesh/del2dx.c
  657. share/apbs/tools/mesh/dx2mol.c
  658. share/apbs/tools/mesh/dx2uhbd.c
  659. share/apbs/tools/mesh/dxmath.c
  660. share/apbs/tools/mesh/mergedx.c
  661. share/apbs/tools/mesh/mergedx2.c
  662. share/apbs/tools/mesh/mgmesh.c
  663. share/apbs/tools/mesh/multivalue.c
  664. share/apbs/tools/mesh/similarity.c
  665. share/apbs/tools/mesh/smooth.c
  666. share/apbs/tools/mesh/tensor2dx.c
  667. share/apbs/tools/mesh/uhbd_asc2bin.c
  668. share/apbs/tools/mesh/value.c
  669. share/apbs/tools/osx/APBS.iconset/icon_128x128.png
  670. share/apbs/tools/osx/APBS.iconset/icon_128x128@2x.png
  671. share/apbs/tools/osx/APBS.iconset/icon_16x16.png
  672. share/apbs/tools/osx/APBS.iconset/icon_16x16@2x.png
  673. share/apbs/tools/osx/APBS.iconset/icon_256x256.png
  674. share/apbs/tools/osx/APBS.iconset/icon_256x256@2x.png
  675. share/apbs/tools/osx/APBS.iconset/icon_32x32.png
  676. share/apbs/tools/osx/APBS.iconset/icon_32x32@2x.png
  677. share/apbs/tools/osx/APBS.iconset/icon_512x512.png
  678. share/apbs/tools/osx/APBS.iconset/icon_512x512@2x.png
  679. share/apbs/tools/osx/apbs_term
  680. share/apbs/tools/osx/info.plist
  681. share/apbs/tools/osx/patch_binary.sh
  682. share/apbs/tools/python/Makefile
  683. share/apbs/tools/python/Makefile.am
  684. share/apbs/tools/python/Makefile.in
  685. share/apbs/tools/python/README
  686. share/apbs/tools/python/apbs.in
  687. share/apbs/tools/python/apbslib.c
  688. share/apbs/tools/python/apbslib.i
  689. share/apbs/tools/python/apbslib_wrap.doc
  690. share/apbs/tools/python/ion.pqr
  691. share/apbs/tools/python/main.py
  692. share/apbs/tools/python/noinput.py
  693. share/apbs/tools/python/vgrid/Makefile
  694. share/apbs/tools/python/vgrid/Makefile.am
  695. share/apbs/tools/python/vgrid/Makefile.in
  696. share/apbs/tools/python/vgrid/README
  697. share/apbs/tools/python/vgrid/average.py
  698. share/apbs/tools/python/vgrid/mergedx.py
  699. share/apbs/tools/python/vgrid/read.py
  700. share/apbs/tools/python/vgrid/vgrid.i
  701. share/apbs/tools/python/vgrid/vgrid.py
  702. share/apbs/tools/python/vgrid/vgridlib.c
  703. share/apbs/tools/visualization/opendx/multipot.cfg
  704. share/apbs/tools/visualization/opendx/multipot.net
  705. share/apbs/tools/visualization/opendx/pot.cfg
  706. share/apbs/tools/visualization/opendx/pot.cm
  707. share/apbs/tools/visualization/opendx/pot.net
  708. share/apbs/tools/visualization/opendx/potacc.cfg
  709. share/apbs/tools/visualization/opendx/potacc.cm
  710. share/apbs/tools/visualization/opendx/potacc.net
  711. share/apbs/tools/visualization/opendx/surface.cfg
  712. share/apbs/tools/visualization/opendx/surface.net
  713. share/apbs/tools/windows/NSI configuration/apbs.nsi
  714. share/apbs/tools/windows/README.txt
  715. share/apbs/tools/windows/command-line support/apbs-cli.bat
  716. share/apbs/tools/windows/configuration headers/apbscfg.h
  717. share/apbs/tools/windows/configuration headers/maloccf.h
  718. share/apbs/tools/windows/visual studio property pages/Debug build properties.props
  719. share/apbs/tools/windows/visual studio property pages/Generic build properties.props
  720. share/apbs/tools/windows/visual studio property pages/Release build properties.props
  721. @postexec /usr/sbin/service ldconfig restart > /dev/null
  722. @postunexec /usr/sbin/service ldconfig restart > /dev/null
Collapse this list.
Dependency lines:
  • apbs>0:science/apbs
To install the port: cd /usr/ports/science/apbs/ && make install clean
To add the package: pkg install apbs
PKGNAME: apbs
Flavors: there is no flavor information for this port.
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. cmake : devel/cmake
  2. ninja : devel/ninja
There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. https://codeload.github.com/Electrostatics/apbs-pdb2pqr/tar.gz/apbs-1.5-102-g500c1473?dummy=/

Number of commits found: 2

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
03 May 2019 06:15:44
Original commit files touched by this commit  1.5.102
Revision:500699
yuri search for other commits by this committer
science/apbs: Fix license
03 May 2019 06:14:57
Original commit files touched by this commit  1.5.102
Revision:500698
yuri search for other commits by this committer
New port: science/apbs: Electrostatic and solvation properties for complex
molecules

Number of commits found: 2

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