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Port details
dssp Application to assign secondary structure to proteins
4.4.7_1 science on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 4.4.7Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-10-04 02:42:39
Last Update: 2024-10-03 10:25:14
Commit Hash: 55cfbcf
People watching this port, also watch:: jdictionary, py311-Automat, py311-python-gdsii, py39-PyOpenGL, p5-Sane
License: BSD2CLAUSE
WWW:
https://github.com/PDB-REDO/dssp
Description:
dssp-4 is a rewrite of DSSP, now offering full mmCIF support. The difference with previous releases of DSSP is that it now writes out an annotated mmCIF file by default, storing the secondary structure information in the _struct_conf category.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (17 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/dssp-4.4.7_1/catalog.mk
  3. /usr/local/share/licenses/dssp-4.4.7_1/LICENSE
  4. /usr/local/share/licenses/dssp-4.4.7_1/BSD2CLAUSE
  5. bin/mkdssp
  6. include/dssp.hpp
  7. lib/cmake/dssp/dsspConfig.cmake
  8. lib/cmake/dssp/dsspTargets-release.cmake
  9. lib/cmake/dssp/dsspTargets.cmake
  10. lib/libdssp.so
  11. lib/libdssp.so.4
  12. lib/libdssp.so.4.4.7
  13. share/libcifpp/dssp-extension.dic
  14. share/man/man1/mkdssp.1.gz
  15. @owner
  16. @group
  17. @mode
Collapse this list.
Dependency lines:
  • dssp>0:science/dssp
To install the port:
cd /usr/ports/science/dssp/ && make install clean
To add the package, run one of these commands:
  • pkg install science/dssp
  • pkg install dssp
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: dssp
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1726683546 SHA256 (PDB-REDO-dssp-v4.4.7_GH0.tar.gz) = d9d4b17143cc8b58080b28c4694eb11b6e167f9ad7c2dfd238b9436500c2de8c SIZE (PDB-REDO-dssp-v4.4.7_GH0.tar.gz) = 163831
Packages (timestamps in pop-ups are UTC):
dssp
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest-4.4.7--4.4.7---
FreeBSD:13:quarterly4.4.24.4.2-4.4.24.4.2-4.4.24.4.2
FreeBSD:14:latest-4.4.74.2.0-4.4.7---
FreeBSD:14:quarterly4.4.24.4.2-4.4.24.4.2-4.4.24.4.2
FreeBSD:15:latest4.4.74.4.7n/a-n/a-4.4.24.4.2
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. libmcfp>0 : devel/libmcfp
  2. mrc : devel/mrc
  3. cmake : devel/cmake-core
Test dependencies:
  1. catch2>0 : devel/catch2
Library dependencies:
  1. libboost_iostreams.so : devel/boost-libs
  2. libcifpp.so : science/libcifpp
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
science_dssp
USES:
cmake:noninja,testing compiler:c++17-lang
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/PDB-REDO/dssp/tar.gz/v4.4.7?dummy=/
Collapse this list.

Number of commits found: 11

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
4.4.7_1
03 Oct 2024 10:25:14
commit hash: 55cfbcf56c31f949cd93e4012c1d705c1094a5c6commit hash: 55cfbcf56c31f949cd93e4012c1d705c1094a5c6commit hash: 55cfbcf56c31f949cd93e4012c1d705c1094a5c6commit hash: 55cfbcf56c31f949cd93e4012c1d705c1094a5c6 files touched by this commit		 Dima Panov (fluffy) search for other commits by this committer 
*/*: bump consumers after devel/boost* update

With hat:	office
Sponsored by:	Future Crew, LLC
4.4.7
18 Sep 2024 19:45:39
commit hash: 2a0b4e3c1e222f79ab9eb8e7e431ad473c8cecafcommit hash: 2a0b4e3c1e222f79ab9eb8e7e431ad473c8cecafcommit hash: 2a0b4e3c1e222f79ab9eb8e7e431ad473c8cecafcommit hash: 2a0b4e3c1e222f79ab9eb8e7e431ad473c8cecaf files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: update 4.4.2 → 4.4.7
4.4.2_1
30 Jul 2024 02:01:57
commit hash: b4d3bbb5d136aaf50530e1233ea1355d8a8f19c7commit hash: b4d3bbb5d136aaf50530e1233ea1355d8a8f19c7commit hash: b4d3bbb5d136aaf50530e1233ea1355d8a8f19c7commit hash: b4d3bbb5d136aaf50530e1233ea1355d8a8f19c7 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/libcifpp: update 5.1.0.1 → 7.0.4
4.4.2
24 Jul 2023 08:48:48
commit hash: 07ce13e9966db23481a5503486a123a0c9524186commit hash: 07ce13e9966db23481a5503486a123a0c9524186commit hash: 07ce13e9966db23481a5503486a123a0c9524186commit hash: 07ce13e9966db23481a5503486a123a0c9524186 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Remove comment

All tests pass.
4.4.2
23 Jul 2023 18:20:43
commit hash: fc8a701bb41600a409cbc714a40bee4c1a759721commit hash: fc8a701bb41600a409cbc714a40bee4c1a759721commit hash: fc8a701bb41600a409cbc714a40bee4c1a759721commit hash: fc8a701bb41600a409cbc714a40bee4c1a759721 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.4.1 → 4.4.2
4.4.1
23 Jul 2023 07:24:19
commit hash: 61075201a010ca4e4476a0a1e8f622d3235c4daacommit hash: 61075201a010ca4e4476a0a1e8f622d3235c4daacommit hash: 61075201a010ca4e4476a0a1e8f622d3235c4daacommit hash: 61075201a010ca4e4476a0a1e8f622d3235c4daa files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.4.0 → 4.4.1
4.4.0
21 Jul 2023 08:03:10
commit hash: 3a20804ab6385ac75f2e2dae4130c52155792812commit hash: 3a20804ab6385ac75f2e2dae4130c52155792812commit hash: 3a20804ab6385ac75f2e2dae4130c52155792812commit hash: 3a20804ab6385ac75f2e2dae4130c52155792812 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.3.1 → 4.4.0

Reported by:	portscout
4.3.1
09 Jun 2023 05:26:59
commit hash: a7ba4c334976d6c0232a7b56dad08a43eb618cdacommit hash: a7ba4c334976d6c0232a7b56dad08a43eb618cdacommit hash: a7ba4c334976d6c0232a7b56dad08a43eb618cdacommit hash: a7ba4c334976d6c0232a7b56dad08a43eb618cda files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.3.0 → 4.3.1

Reported by:	portscout
4.3.0
03 Jun 2023 07:01:40
commit hash: 9f75318f8ef4d8fe8cbdb7c301e91facf463a39dcommit hash: 9f75318f8ef4d8fe8cbdb7c301e91facf463a39dcommit hash: 9f75318f8ef4d8fe8cbdb7c301e91facf463a39dcommit hash: 9f75318f8ef4d8fe8cbdb7c301e91facf463a39d files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.2.0 → 4.3.0

Reported by:	portscout
4.2.0
24 Nov 2022 11:09:17
commit hash: d264d6648ccebb6d6734081e0693f086cbab0200commit hash: d264d6648ccebb6d6734081e0693f086cbab0200commit hash: d264d6648ccebb6d6734081e0693f086cbab0200commit hash: d264d6648ccebb6d6734081e0693f086cbab0200 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: Update 4.0.5 -> 4.2.0
4.0.5
04 Oct 2022 02:40:28
commit hash: fdff0a76080203275164e33d8892f6b2f9f0788dcommit hash: fdff0a76080203275164e33d8892f6b2f9f0788dcommit hash: fdff0a76080203275164e33d8892f6b2f9f0788dcommit hash: fdff0a76080203275164e33d8892f6b2f9f0788d files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
science/dssp: New port: Application to assign secondary structure to proteins

Number of commits found: 11
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