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Port details
ghmm General Hidden Markov Model Library in C
0.9.r3 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port
0.9.r3Version of this port present on the latest quarterly branch.

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2006-07-28 03:37:20
Last Update: 2016-05-19 11:53:06
SVN Revision: 415500
Also Listed In: math
License: GPLv3
The General Hidden Markov Model Library (GHMM) is a C library
with additional Python bindings implementing a wide range of
types of Hidden Markov Models and algorithms:
discrete, continous emissions, basic training,
HMM clustering, HMM mixtures.

WWW: http://ghmm.sourceforge.net/
SVNWeb : Homepage
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (48 items)
  1. /usr/local/share/licenses/ghmm-0.9.r3/catalog.mk
  2. /usr/local/share/licenses/ghmm-0.9.r3/LICENSE
  3. /usr/local/share/licenses/ghmm-0.9.r3/GPLv3
  4. bin/cluster
  5. bin/ghmm-config
  6. bin/probdist
  7. bin/scluster
  8. bin/smix_hmm
  9. include/ghmm/cfbgibbs.h
  10. include/ghmm/cluster.h
  11. include/ghmm/discrime.h
  12. include/ghmm/fbgibbs.h
  13. include/ghmm/foba.h
  14. include/ghmm/ghmm.h
  15. include/ghmm/ghmmconfig.h
  16. include/ghmm/gradescent.h
  17. include/ghmm/kbest.h
  18. include/ghmm/model.h
  19. include/ghmm/obsolete.h
  20. include/ghmm/pmodel.h
  21. include/ghmm/psequence.h
  22. include/ghmm/pviterbi.h
  23. include/ghmm/pviterbi_propagate.h
  24. include/ghmm/reestimate.h
  25. include/ghmm/rng.h
  26. include/ghmm/scanner.h
  27. include/ghmm/scluster.h
  28. include/ghmm/sdfoba.h
  29. include/ghmm/sdmodel.h
  30. include/ghmm/sequence.h
  31. include/ghmm/sfoba.h
  32. include/ghmm/sgenerate.h
  33. include/ghmm/smap_classify.h
  34. include/ghmm/smixturehmm.h
  35. include/ghmm/smodel.h
  36. include/ghmm/sreestimate.h
  37. include/ghmm/sviterbi.h
  38. include/ghmm/unsupported.h
  39. include/ghmm/viterbi.h
  40. include/ghmm/xmlreader.h
  41. include/ghmm/xmlwriter.h
  42. lib/libghmm.a
  43. lib/libghmm.so
  44. lib/libghmm.so.1
  45. lib/libghmm.so.1.0.0
  46. share/ghmm/ghmm.dtd.1.0
  47. @postexec /sbin/ldconfig -m /usr/local/lib
  48. @postunexec /sbin/ldconfig -R
  49. Collapse this list.
Dependency lines:
  • ghmm>0:science/ghmm
  • libghmm.so:science/ghmm

To install the port: cd /usr/ports/science/ghmm/ && make install clean
To add the package: pkg install ghmm

PKGNAME: ghmm

There is no flavor information for this port.

distinfo:

SHA256 (ghmm-0.9-rc3.tar.gz) = c42462ff4f87aadd5efe7bb6adb59657786ed71046ba924111bc28c7cbb588d0
SIZE (ghmm-0.9-rc3.tar.gz) = 770526


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. autoconf-2.69 : devel/autoconf
  2. autoheader-2.69 : devel/autoconf
  3. autoreconf-2.69 : devel/autoconf
  4. aclocal-1.15 : devel/automake
  5. automake-1.15 : devel/automake
  6. libtoolize : devel/libtool
  7. pkgconf>=1.3.0_1 : devel/pkgconf
Library dependencies:
  1. libxml2.so : textproc/libxml2
There are no ports dependent upon this port

Configuration Options
     No options to configure

USES:
autoreconf libtool pkgconfig gnome

Master Sites:
  1. http://cytranet.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  2. http://downloads.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  3. http://excellmedia.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  4. http://freefr.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  5. http://jaist.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  6. http://kent.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  7. http://nchc.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  8. http://netcologne.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  9. http://netix.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  10. http://superb-dca2.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  11. http://superb-sea2.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  12. http://ufpr.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  13. http://vorboss.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  14. https://cytranet.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  15. https://downloads.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  16. https://excellmedia.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  17. https://freefr.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  18. https://jaist.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  19. https://kent.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  20. https://nchc.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  21. https://netcologne.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  22. https://netix.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  23. https://superb-dca2.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  24. https://superb-sea2.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  25. https://ufpr.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/
  26. https://vorboss.dl.sourceforge.net/project/ghmm/ghmm/ghmm%200.9-rc3/

Number of commits found: 17

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
19 May 2016 10:53:06
Original commit files touched by this commit  0.9.r3
Revision:415500
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-descrs, categories [p-x]*

Approved by:	portmgr blanket
01 Apr 2016 14:25:18
Original commit files touched by this commit  0.9.r3
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
18 Sep 2015 06:16:31
Original commit files touched by this commit  0.9.r3
Revision:397226
wen search for other commits by this committer
- Update to 0.9.r3
- Add LICENSE
- Pet portlint
02 Dec 2014 22:40:57
Original commit files touched by this commit  0.7.0b_1
Revision:373790
bapt search for other commits by this committer
Reset maintainership:
- Lots of maintainers timeout
- unresponsive for almost a year

PR:		195059
12 Nov 2014 18:48:53
Original commit files touched by this commit  0.7.0b_1
Revision:372500
antoine search for other commits by this committer
Cleanup plist
08 Jul 2014 14:50:22
Original commit files touched by this commit  0.7.0b_1
Revision:361254
tijl search for other commits by this committer
- Convert to USES=libtool
- Add INSTALL_TARGET=install-strip
21 Jan 2014 23:40:23
Original commit files touched by this commit  0.7.0b
Revision:340674
bapt search for other commits by this committer
Fix properties on pkg-plist
25 Sep 2013 00:54:09
Original commit files touched by this commit  0.7.0b
Revision:328226
bdrewery search for other commits by this committer
- Remove NO_STAGE as these have been tested to be safe

With hat:	portmgr
20 Sep 2013 22:48:31
Original commit files touched by this commit  0.7.0b
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
03 Jul 2011 13:22:25
Original commit files touched by this commit  0.7.0b

ohauer search for other commits by this committer
 - remove MD5
04 Dec 2010 07:34:27
Original commit files touched by this commit  0.7.0b

ade search for other commits by this committer
Sync to new bsd.autotools.mk
22 Aug 2009 00:35:32
Original commit files touched by this commit  0.7.0b
  Sanity Test Failure
amdmi3 search for other commits by this committer
- Switch SourceForge ports to the new File Release System: categories starting
with P,R,S
02 Aug 2009 19:36:34
Original commit files touched by this commit  0.7.0b

mezz search for other commits by this committer
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
-Update libtool and libltdl to 2.2.6a.
-Remove devel/libtool15 and devel/libltdl15.
-Fix ports build with libtool22/libltdl22.
-Bump ports that depend on libltdl22 due to shared library version change.
-Explain what to do update in the UPDATING.

It has been tested with GNOME2, XFCE4, KDE3, KDE4 and other many wm/desktop
and applications in the runtime.

With help:      marcus and kwm
Pointyhat-exp:  a few times by pav
Tested by:      pgollucci, "Romain Tartière" <romain@blogreen.org>, and
                a few MarcusCom CVS users. Also, I might have missed a few.
Repocopy by:    marcus
Approved by:    portmgr
01 Feb 2007 02:42:06
Original commit files touched by this commit  0.7.0b

kris search for other commits by this committer
Use libtool port instead of included version to avoid objformat a.out botch
02 Nov 2006 09:25:57
Original commit files touched by this commit  0.7.0b

clsung search for other commits by this committer
- Update to 0.7.0b
- from Changes
  * fixed a bug in reestimate_setlambda
15 Aug 2006 01:45:58
Original commit files touched by this commit  0.7.0a

clsung search for other commits by this committer
- s,INSTALLS_SHLIB,USE_LDCONFIG,g

PR:             ports/101916
Submitted by:   Gea-Suan Lin <gslin_AT_gslin dot org>
28 Jul 2006 03:36:25
Original commit files touched by this commit  0.7.0a

clsung search for other commits by this committer
Add ghmm 0.7.0a, general Hidden Markov Model Library in C.

PR:             ports/100886
Submitted by:   Cheng-Lung Sung <clsung at FreeBSD.org>

Number of commits found: 17

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