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Port details
gromacs Compute molecular dynamics
2020_1 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 2019.5Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2004-10-19 01:46:50
Last Update: 2020-02-05 17:35:05
SVN Revision: 525285
License: LGPL21
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (497 items)
  1. @ldconfig
  2. /usr/local/share/licenses/gromacs-2020_1/catalog.mk
  3. /usr/local/share/licenses/gromacs-2020_1/LICENSE
  4. /usr/local/share/licenses/gromacs-2020_1/LGPL21
  5. bin/GMXRC
  6. bin/GMXRC.bash
  7. bin/GMXRC.csh
  8. bin/GMXRC.zsh
  9. bin/demux.pl
  10. bin/gmx
  11. bin/gmx-completion-gmx.bash
  12. bin/xplor2gmx.pl
  13. include/gmxapi/compat/mdparams.h
  14. include/gmxapi/compat/tpr.h
  15. include/gmxapi/context.h
  16. include/gmxapi/exceptions.h
  17. include/gmxapi/gmxapi.h
  18. include/gmxapi/gmxapicompat.h
  19. include/gmxapi/gromacsfwd.h
  20. include/gmxapi/md.h
  21. include/gmxapi/md/mdmodule.h
  22. include/gmxapi/md/mdsignals.h
  23. include/gmxapi/session.h
  24. include/gmxapi/session/resources.h
  25. include/gmxapi/status.h
  26. include/gmxapi/system.h
  27. include/gmxapi/version.h
  28. include/gromacs/math/vectypes.h
  29. include/gromacs/restraint/restraintpotential.h
  30. include/gromacs/utility/basedefinitions.h
  31. include/gromacs/utility/current_function.h
  32. include/gromacs/utility/gmxassert.h
  33. include/gromacs/utility/real.h
  34. lib/libgmxapi.so
  35. lib/libgmxapi.so.0
  36. lib/libgmxapi.so.0.1.0
  37. lib/libgromacs.so
  38. lib/libgromacs.so.5
  39. lib/libgromacs.so.5.0.0
  40. libdata/pkgconfig/libgromacs.pc
  41. share/cmake/gmxapi/gmxapi-config-version.cmake
  42. share/cmake/gmxapi/gmxapi-config.cmake
  43. share/cmake/gmxapi/gmxapi-release.cmake
  44. share/cmake/gmxapi/gmxapi.cmake
  45. share/cmake/gromacs/gromacs-config-version.cmake
  46. share/cmake/gromacs/gromacs-config.cmake
  47. share/cmake/gromacs/gromacs-toolchain.cmake
  48. share/cmake/gromacs/libgromacs-release.cmake
  49. share/cmake/gromacs/libgromacs.cmake
  50. share/gromacs/COPYING
  51. share/gromacs/README.tutor
  52. share/gromacs/README_FreeEnergyModifications.txt
  53. @comment share/gromacs/opencl/nbnxn_ocl_kernel_amd.clh
  54. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nowarp.clh
  55. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nvidia.clh
  56. @comment share/gromacs/opencl/nbnxn_ocl_kernel_pruneonly.clh
  57. @comment share/gromacs/opencl/nbnxn_ocl_kernel_utils.clh
  58. @comment share/gromacs/opencl/nbnxn_ocl_kernels.cl
  59. @comment share/gromacs/opencl/nbnxn_ocl_kernels.clh
  60. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen.clh
  61. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen_add_twincut.clh
  62. @comment share/gromacs/opencl/vectype_ops.clh
  63. share/gromacs/template/CMakeLists.txt
  64. share/gromacs/template/Makefile.pkg
  65. share/gromacs/template/README
  66. share/gromacs/template/cmake/FindGROMACS.cmake
  67. share/gromacs/template/template.cpp
  68. share/gromacs/top/README
  69. share/gromacs/top/amber03.ff/aminoacids.arn
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  340. share/gromacs/top/gromos43a1.ff/forcefield.doc
  341. share/gromacs/top/gromos43a1.ff/forcefield.itp
  342. share/gromacs/top/gromos43a1.ff/ions.itp
  343. share/gromacs/top/gromos43a1.ff/methanol.itp
  344. share/gromacs/top/gromos43a1.ff/methanol216.gro
  345. share/gromacs/top/gromos43a1.ff/spc.itp
  346. share/gromacs/top/gromos43a1.ff/spce.itp
  347. share/gromacs/top/gromos43a1.ff/tip3p.itp
  348. share/gromacs/top/gromos43a1.ff/tip4p.itp
  349. share/gromacs/top/gromos43a1.ff/watermodels.dat
  350. share/gromacs/top/gromos43a2.ff/aminoacids.c.tdb
  351. share/gromacs/top/gromos43a2.ff/aminoacids.hdb
  352. share/gromacs/top/gromos43a2.ff/aminoacids.n.tdb
  353. share/gromacs/top/gromos43a2.ff/aminoacids.r2b
  354. share/gromacs/top/gromos43a2.ff/aminoacids.rtp
  355. share/gromacs/top/gromos43a2.ff/aminoacids.vsd
  356. share/gromacs/top/gromos43a2.ff/atomtypes.atp
  357. share/gromacs/top/gromos43a2.ff/ff_dum.itp
  358. share/gromacs/top/gromos43a2.ff/ffbonded.itp
  359. share/gromacs/top/gromos43a2.ff/ffnonbonded.itp
  360. share/gromacs/top/gromos43a2.ff/forcefield.doc
  361. share/gromacs/top/gromos43a2.ff/forcefield.itp
  362. share/gromacs/top/gromos43a2.ff/ions.itp
  363. share/gromacs/top/gromos43a2.ff/spc.itp
  364. share/gromacs/top/gromos43a2.ff/spce.itp
  365. share/gromacs/top/gromos43a2.ff/tip3p.itp
  366. share/gromacs/top/gromos43a2.ff/tip4p.itp
  367. share/gromacs/top/gromos43a2.ff/watermodels.dat
  368. share/gromacs/top/gromos45a3.ff/aminoacids.c.tdb
  369. share/gromacs/top/gromos45a3.ff/aminoacids.hdb
  370. share/gromacs/top/gromos45a3.ff/aminoacids.n.tdb
  371. share/gromacs/top/gromos45a3.ff/aminoacids.r2b
  372. share/gromacs/top/gromos45a3.ff/aminoacids.rtp
  373. share/gromacs/top/gromos45a3.ff/aminoacids.vsd
  374. share/gromacs/top/gromos45a3.ff/atomtypes.atp
  375. share/gromacs/top/gromos45a3.ff/ff_dum.itp
  376. share/gromacs/top/gromos45a3.ff/ffbonded.itp
  377. share/gromacs/top/gromos45a3.ff/ffnonbonded.itp
  378. share/gromacs/top/gromos45a3.ff/forcefield.doc
  379. share/gromacs/top/gromos45a3.ff/forcefield.itp
  380. share/gromacs/top/gromos45a3.ff/ions.itp
  381. share/gromacs/top/gromos45a3.ff/spc.itp
  382. share/gromacs/top/gromos45a3.ff/spce.itp
  383. share/gromacs/top/gromos45a3.ff/tip3p.itp
  384. share/gromacs/top/gromos45a3.ff/tip4p.itp
  385. share/gromacs/top/gromos45a3.ff/watermodels.dat
  386. share/gromacs/top/gromos53a5.ff/aminoacids.c.tdb
  387. share/gromacs/top/gromos53a5.ff/aminoacids.hdb
  388. share/gromacs/top/gromos53a5.ff/aminoacids.n.tdb
  389. share/gromacs/top/gromos53a5.ff/aminoacids.r2b
  390. share/gromacs/top/gromos53a5.ff/aminoacids.rtp
  391. share/gromacs/top/gromos53a5.ff/aminoacids.vsd
  392. share/gromacs/top/gromos53a5.ff/atomname2type.n2t
  393. share/gromacs/top/gromos53a5.ff/atomtypes.atp
  394. share/gromacs/top/gromos53a5.ff/ff_dum.itp
  395. share/gromacs/top/gromos53a5.ff/ffbonded.itp
  396. share/gromacs/top/gromos53a5.ff/ffnonbonded.itp
  397. share/gromacs/top/gromos53a5.ff/forcefield.doc
  398. share/gromacs/top/gromos53a5.ff/forcefield.itp
  399. share/gromacs/top/gromos53a5.ff/ions.itp
  400. share/gromacs/top/gromos53a5.ff/spc.itp
  401. share/gromacs/top/gromos53a5.ff/spce.itp
  402. share/gromacs/top/gromos53a5.ff/tip3p.itp
  403. share/gromacs/top/gromos53a5.ff/tip4p.itp
  404. share/gromacs/top/gromos53a5.ff/watermodels.dat
  405. share/gromacs/top/gromos53a6.ff/aminoacids.c.tdb
  406. share/gromacs/top/gromos53a6.ff/aminoacids.hdb
  407. share/gromacs/top/gromos53a6.ff/aminoacids.n.tdb
  408. share/gromacs/top/gromos53a6.ff/aminoacids.r2b
  409. share/gromacs/top/gromos53a6.ff/aminoacids.rtp
  410. share/gromacs/top/gromos53a6.ff/aminoacids.vsd
  411. share/gromacs/top/gromos53a6.ff/atomtypes.atp
  412. share/gromacs/top/gromos53a6.ff/ff_dum.itp
  413. share/gromacs/top/gromos53a6.ff/ffbonded.itp
  414. share/gromacs/top/gromos53a6.ff/ffnonbonded.itp
  415. share/gromacs/top/gromos53a6.ff/forcefield.doc
  416. share/gromacs/top/gromos53a6.ff/forcefield.itp
  417. share/gromacs/top/gromos53a6.ff/ions.itp
  418. share/gromacs/top/gromos53a6.ff/spc.itp
  419. share/gromacs/top/gromos53a6.ff/spce.itp
  420. share/gromacs/top/gromos53a6.ff/tip3p.itp
  421. share/gromacs/top/gromos53a6.ff/tip4p.itp
  422. share/gromacs/top/gromos53a6.ff/watermodels.dat
  423. share/gromacs/top/gromos54a7.ff/aminoacids.c.tdb
  424. share/gromacs/top/gromos54a7.ff/aminoacids.hdb
  425. share/gromacs/top/gromos54a7.ff/aminoacids.n.tdb
  426. share/gromacs/top/gromos54a7.ff/aminoacids.r2b
  427. share/gromacs/top/gromos54a7.ff/aminoacids.rtp
  428. share/gromacs/top/gromos54a7.ff/aminoacids.vsd
  429. share/gromacs/top/gromos54a7.ff/atomtypes.atp
  430. share/gromacs/top/gromos54a7.ff/dppc.itp
  431. share/gromacs/top/gromos54a7.ff/ff_dum.itp
  432. share/gromacs/top/gromos54a7.ff/ffbonded.itp
  433. share/gromacs/top/gromos54a7.ff/ffnonbonded.itp
  434. share/gromacs/top/gromos54a7.ff/forcefield.doc
  435. share/gromacs/top/gromos54a7.ff/forcefield.itp
  436. share/gromacs/top/gromos54a7.ff/ions.itp
  437. share/gromacs/top/gromos54a7.ff/popc.itp
  438. share/gromacs/top/gromos54a7.ff/spc.itp
  439. share/gromacs/top/gromos54a7.ff/spce.itp
  440. share/gromacs/top/gromos54a7.ff/tip3p.itp
  441. share/gromacs/top/gromos54a7.ff/tip4p.itp
  442. share/gromacs/top/gromos54a7.ff/tmcl.itp
  443. share/gromacs/top/gromos54a7.ff/watermodels.dat
  444. share/gromacs/top/ha-shift.dat
  445. share/gromacs/top/ions.itp
  446. share/gromacs/top/nsfactor.dat
  447. share/gromacs/top/oplsaa.ff/1propanol.itp
  448. share/gromacs/top/oplsaa.ff/aminoacids.c.tdb
  449. share/gromacs/top/oplsaa.ff/aminoacids.hdb
  450. share/gromacs/top/oplsaa.ff/aminoacids.n.tdb
  451. share/gromacs/top/oplsaa.ff/aminoacids.r2b
  452. share/gromacs/top/oplsaa.ff/aminoacids.rtp
  453. share/gromacs/top/oplsaa.ff/aminoacids.vsd
  454. share/gromacs/top/oplsaa.ff/atomname2type.n2t
  455. share/gromacs/top/oplsaa.ff/atomtypes.atp
  456. share/gromacs/top/oplsaa.ff/ethanol.itp
  457. share/gromacs/top/oplsaa.ff/ffbonded.itp
  458. share/gromacs/top/oplsaa.ff/ffnonbonded.itp
  459. share/gromacs/top/oplsaa.ff/forcefield.doc
  460. share/gromacs/top/oplsaa.ff/forcefield.itp
  461. share/gromacs/top/oplsaa.ff/ions.itp
  462. share/gromacs/top/oplsaa.ff/methanol.itp
  463. share/gromacs/top/oplsaa.ff/spc.itp
  464. share/gromacs/top/oplsaa.ff/spce.itp
  465. share/gromacs/top/oplsaa.ff/tip3p.itp
  466. share/gromacs/top/oplsaa.ff/tip4p.itp
  467. share/gromacs/top/oplsaa.ff/tip4pew.itp
  468. share/gromacs/top/oplsaa.ff/tip5p.itp
  469. share/gromacs/top/oplsaa.ff/tip5pe.itp
  470. share/gromacs/top/oplsaa.ff/watermodels.dat
  471. share/gromacs/top/phbres.dat
  472. share/gromacs/top/ps.m2p
  473. share/gromacs/top/random.dat
  474. share/gromacs/top/refi_aa.dat
  475. share/gromacs/top/residues.dtd
  476. share/gromacs/top/residues.xml
  477. share/gromacs/top/residuetypes.dat
  478. share/gromacs/top/sfactor.dat
  479. share/gromacs/top/spc.itp
  480. share/gromacs/top/spc216.gro
  481. share/gromacs/top/spce.itp
  482. share/gromacs/top/specbond.dat
  483. share/gromacs/top/ss.map
  484. share/gromacs/top/surface.dat
  485. share/gromacs/top/sw.itp
  486. share/gromacs/top/table6-10.xvg
  487. share/gromacs/top/table6-11.xvg
  488. share/gromacs/top/table6-12.xvg
  489. share/gromacs/top/table6-8.xvg
  490. share/gromacs/top/table6-9.xvg
  491. share/gromacs/top/tip3p.itp
  492. share/gromacs/top/tip4p.gro
  493. share/gromacs/top/tip4p.itp
  494. share/gromacs/top/tip5p.gro
  495. share/gromacs/top/vdw-msms.dat
  496. share/gromacs/top/vdwradii.dat
  497. share/gromacs/top/xlateat.dat
Collapse this list.
Dependency lines:
  • gromacs>0:science/gromacs
To install the port: cd /usr/ports/science/gromacs/ && make install clean
To add the package: pkg install gromacs
PKGNAME: gromacs
Flavors: there is no flavor information for this port.
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. boost-libs>=1.44 : devel/boost-libs
  2. clang90 : devel/llvm90
  3. fftw3>0 : math/fftw3
  4. cmake : devel/cmake
  5. gfortran9 : lang/gcc9
  6. pkgconf>=1.3.0_1 : devel/pkgconf
  7. as : devel/binutils
  8. perl5>=5.30.r1<5.31 : lang/perl5.30
  9. ice.pc : x11/libICE
  10. sm.pc : x11/libSM
  11. xext.pc : x11/libXext
  12. x11.pc : x11/libX11
Runtime dependencies:
  1. gfortran9 : lang/gcc9
  2. perl5>=5.30.r1<5.31 : lang/perl5.30
  3. ice.pc : x11/libICE
  4. sm.pc : x11/libSM
  5. xext.pc : x11/libXext
  6. x11.pc : x11/libX11
Library dependencies:
  1. libhwloc.so : devel/hwloc
  2. libfftw3f.so : math/fftw3-float
  3. libomp.so : devel/openmp
  4. libxml2.so : textproc/libxml2
  5. libblas.so : math/blas
  6. liblapack.so : math/lapack
There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. ftp://ftp.gromacs.org/pub/gromacs/

Number of commits found: 110 (showing only 100 on this page)

1 | 2  »  

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
05 Feb 2020 17:35:05
Original commit files touched by this commit  2020_1
Revision:525285
antoine search for other commits by this committer
Don't both set compiler + USES=compiler
05 Feb 2020 15:52:42
Original commit files touched by this commit  2020_1
Revision:525280
yuri search for other commits by this committer
science/gromacs: Fix build on systems with older clang (clang-6)

Reported by:	fallout
30 Jan 2020 14:17:44
Original commit files touched by this commit  2020_1
Revision:524642
swills search for other commits by this committer
Fix math/openblas and bump dependent ports

* Fix build on i386 [1]
* Fix science/code_saturne build with new openblas [2]
* Avoid installing private headers [3]
* Prevent build from optimizing for host by correcting build confg [4]
* Bump portrevision of dependent ports [5]

This is correcting issues from r523749 [1][2][4] and r515970 [3]

PR:		231371
Reported by:	build cluster [1]
Reported by:	Dima Pasechnik <dimpase+freebsd@gmail.com> [2]
Reported by:	many [5]
Reviewed by:	mat, bapt
Approved by:	implicit, since this is a build fix
30 Jan 2020 09:49:50
Original commit files touched by this commit  2020
Revision:524639
yuri search for other commits by this committer
science/gromacs: Change compiler requirement to c++14 along the flags that the
project supplies.

Reported by:	fallout
12 Jan 2020 01:13:06
Original commit files touched by this commit  2020
Revision:522739
yuri search for other commits by this committer
science/gromacs: Update 2019.5 -> 2020

Reported by:	repology
24 Dec 2019 07:45:13
Original commit files touched by this commit  2019.5
Revision:520781
yuri search for other commits by this committer
science/gromacs: Update 2019.4 -> 2019.5

Reported by:	portscout
11 Dec 2019 17:53:49
Original commit files touched by this commit  2019.4_1
Revision:519824
jbeich search for other commits by this committer
devel/boost-*: update to 1.72.0

Changes:	http://www.boost.org/users/history/version_1_72_0.html
PR:		241449
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D22136
05 Oct 2019 22:57:39
Original commit files touched by this commit  2019.4
Revision:513855
yuri search for other commits by this committer
science/gromacs: Update 2019.3 -> 2019.4

Reported by:	portscout
21 Sep 2019 18:59:57
Original commit files touched by this commit  2019.3_3
Revision:512535
jbeich search for other commits by this committer
devel/openmp: update to 9.0.0

- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783

Changes:	http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI:		https://abi-laboratory.pro/tracker/timeline/llvm_openmp/
19 Aug 2019 15:35:28
Original commit files touched by this commit  2019.3_2
Revision:509290
jbeich search for other commits by this committer
devel/boost-*: update to 1.71.0

Changes:	http://www.boost.org/users/history/version_1_71_0.html
PR:		238827
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D20774
26 Jul 2019 20:46:57
Original commit files touched by this commit  2019.3_1
Revision:507372
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
15 Jun 2019 19:35:27
Original commit files touched by this commit  2019.3
Revision:504264
yuri search for other commits by this committer
science/gromacs: Update 2019.2 -> 2019.3

Reported by:	portscout
08 May 2019 16:05:53
Original commit files touched by this commit  2019.2_2
Revision:501030
jbeich search for other commits by this committer
devel/openmp: phase out

- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)

PR:		236907
Approved by:	bapt (maintainer)
Differential Revision:	https://reviews.freebsd.org/D19767
28 Apr 2019 08:30:15
Original commit files touched by this commit  2019.2_1
Revision:500294
yuri search for other commits by this committer
science/gromacs: Broken on i386

Reported by:	fallout
22 Apr 2019 13:16:34
Original commit files touched by this commit  2019.2_1
Revision:499638
gerald search for other commits by this committer
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl
20 Apr 2019 15:47:28
Original commit files touched by this commit  2019.2
Revision:499453
yuri search for other commits by this committer
science/gromacs: Update 2019.1 -> 2019.2

Reported by:	portscout
12 Apr 2019 06:36:31
Original commit files touched by this commit  2019.1_1
Revision:498698
jbeich search for other commits by this committer
devel/boost-*: update to 1.70.0

Changes:	http://www.boost.org/users/history/version_1_70_0.html
PR:		235956
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19303
17 Feb 2019 02:32:08
Original commit files touched by this commit  2019.1
Revision:493145
yuri search for other commits by this committer
science/gromacs: Update 2019 -> 2019.1

Reported by:	portscout
22 Jan 2019 02:02:15
Original commit files touched by this commit  2019
Revision:490922
yuri search for other commits by this committer
science/gromacs: Update 2018.4 -> 2019

Reported by:	repology
25 Dec 2018 20:25:40
Original commit files touched by this commit  2018.4_2
Revision:488341
tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
12 Dec 2018 01:35:36
Original commit files touched by this commit  2018.4_2
Revision:487272
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
12 Dec 2018 00:15:50
Original commit files touched by this commit  2018.4_1
Revision:487266
jbeich search for other commits by this committer
devel/boost-*: update to 1.69.0

Changes:	http://www.boost.org/users/history/version_1_69_0.html
PR:		232525
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D17645
15 Nov 2018 02:22:10
Original commit files touched by this commit  2018.4
Revision:484990
yuri search for other commits by this committer
science/gromacs: Update 2018.3 -> 2018.4

Reported by:	portscout
05 Nov 2018 23:51:03
Original commit files touched by this commit  2018.3_1
Revision:484261
linimon search for other commits by this committer
Add compiler:c++11-lang to USES to fix build on gcc-based archs.

Approved by:	portmgr (tier-2 blanket)
22 Sep 2018 16:36:38
Original commit files touched by this commit  2018.3_1
Revision:480395
yuri search for other commits by this committer
Change 20 ports from net/mpich2 to net/mpich

mpich2 is the obsolete version 2.x, mpich is at the current version 3.x

Ports:
math/scalapack science/nwchem science/quantum-espresso science/qmcpack
science/madness
science/qbox science/openmx science/jdftx science/fleur science/libgridxc
science/mdynamix science/lm science/dftbplus science/py-gpaw devel/ga
math/elpa net/charm science/gromacs math/pari math/arpack-ng-mpich
24 Aug 2018 17:52:09
Original commit files touched by this commit  2018.3
Revision:477971
yuri search for other commits by this committer
science/gromacs: Update 2018.2 -> 2018.3

Reported by:	portscout
09 Aug 2018 06:58:31
Original commit files touched by this commit  2018.2_3
Revision:476723
jbeich search for other commits by this committer
devel/boost-*: update to 1.68.0

- Switch to C++14 for libboost_system to support C++14 consumers

Changes:	http://www.boost.org/users/history/version_1_68_0.html
PR:		229569
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D16165
29 Jul 2018 22:18:46
Original commit files touched by this commit  2018.2_2
Revision:475857
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
16 Jun 2018 21:07:11
Original commit files touched by this commit  2018.2_1
Revision:472566
yuri search for other commits by this committer
science/gromacs: Chase the changed tarball

The upstream "rerelased" 2018.2, so updating the port.

Reported by:	fallout
14 Jun 2018 08:17:41
Original commit files touched by this commit  2018.2
Revision:472367
yuri search for other commits by this committer
science/gromacs: Update 2018.1 -> 2018.2

Reported by:	portscout
19 Apr 2018 08:04:10
Original commit files touched by this commit  2018.1
Revision:467753
yuri search for other commits by this committer
science/gromacs: Update 5.0.6 -> 2018.1

Port changes:
* Take maintainership.
* Modernize the port, now using option helpers.
* Add the OPENCL option.
* Add the THREAD_MPI option that is now the default multiprocessing option.
* Add missing dependencies.
18 Apr 2018 13:57:43
Original commit files touched by this commit  5.0.6_12
Revision:467711
jbeich search for other commits by this committer
devel/boost-*: update to 1.67.0

Changes:	http://www.boost.org/users/history/version_1_67_0.html
PR:		227427
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D15030
10 Mar 2018 17:46:06
Original commit files touched by this commit  5.0.6_11
Revision:464084
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
18 Jan 2018 04:11:03
Original commit files touched by this commit  5.0.6_10
Revision:459315
jbeich search for other commits by this committer
devel/boost-*: update to 1.66.0

Changes:	http://www.boost.org/users/history/version_1_66_0.html
PR:		223922
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D13279
25 Sep 2017 00:08:17
Original commit files touched by this commit  5.0.6_9
Revision:450560
jbeich search for other commits by this committer
devel/boost-*: update to 1.65.1

Changes:	http://www.boost.org/users/history/version_1_65_1.html
PR:		218835
Approved by:	maintainer timeout (1.65.1: 2 weeks; 1.65.0: 1 month)
Tested by:	jhibbits (on powerpc64, earlier version)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
25 Sep 2017 00:05:06
Original commit files touched by this commit  5.0.6_8
Revision:450557
jbeich search for other commits by this committer
devel/boost-*: enable C++11 features

PR:		218835
Obtained from:	https://github.com/DragonFlyBSD/DeltaPorts/pull/690
Approved by:	maintainer timeout (2 months)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
10 Sep 2017 20:55:39
Original commit files touched by this commit  5.0.6_7
Revision:449591
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
02 May 2017 06:48:11
Original commit files touched by this commit  5.0.6_6
Revision:439934
jbeich search for other commits by this committer
devel/boost-*: update to 1.64.0

Changes:	http://www.boost.org/users/history/version_1_64_0.html
PR:		218835
Approved by:	office (bapt)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D10472
01 Apr 2017 15:23:32
Original commit files touched by this commit  5.0.6_5
Revision:437439
gerald search for other commits by this committer
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
06 Jan 2017 08:45:04
Original commit files touched by this commit  5.0.6_4
Revision:430692
jbeich search for other commits by this committer
devel/boost-*: update to 1.63.0

Changes:	http://www.boost.org/users/history/version_1_63_0.html
PR:		215598
Exp-run by:	antoine
Approved by:	office (bapt)
MFH:		2017Q1
26 Dec 2016 11:59:12
Original commit files touched by this commit  5.0.6_3
Revision:429499
rene search for other commits by this committer
Reset ports per maintainer request.

PR:		215557
Submitted by:	A.J. "Fonz" van Werven (maintainer)
07 Dec 2016 13:24:57
Original commit files touched by this commit  5.0.6_3
Revision:428057
gerald search for other commits by this committer
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.

The first part covered  ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.

This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.

PR:		214965
Reported by:	thierry
23 Nov 2016 12:45:47
Original commit files touched by this commit  5.0.6_2
Revision:426908
jbeich search for other commits by this committer
devel/boost-*: update to 1.62.0

- Enable `long double` C99 math usage
- Switch 9.x back to building with GCC

Changes:	http://www.boost.org/users/history/
PR:		199601
Submitted by:	Chen Xu, bapt, amdmi3, truckman (based on)
Reviewed by:	rakuco (kde) (earlier version)
Exp-run by:	antoine (3 tries), truckman (consumers only, earlier versions)
Approved by:	bapt (office)
20 Nov 2016 09:38:09
Original commit files touched by this commit  5.0.6_1
Revision:426566
gerald search for other commits by this committer
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
01 Apr 2016 14:25:18
Original commit files touched by this commit  5.0.6
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
16 Aug 2015 21:31:42
Original commit files touched by this commit  5.0.6
Revision:394419
amdmi3 search for other commits by this committer
- Update to 5.0.6
- Pass maintainership to submitter
- Add distfile mirror

PR:		201921
Submitted by:	freebsd@skysmurf.nl
19 May 2015 01:59:50
Original commit files touched by this commit  5.0.5
Revision:386731
wen search for other commits by this committer
- Update to 5.0.5

PR:		200306
Submitted by:	tkato432@yahoo.com
17 Feb 2015 01:46:25
Original commit files touched by this commit  5.0.4
Revision:379134
vanilla search for other commits by this committer
Upgrade to 5.0.4.

PR:		197454
Submitted by:	Ports Fury.
03 Feb 2015 15:09:57
Original commit files touched by this commit  5.0.2_1
Revision:378358
thierry search for other commits by this committer
Uses blaslapack.
26 Dec 2014 14:24:13
Original commit files touched by this commit  5.0.2_1
Revision:375624
danilo search for other commits by this committer
- Update net/openmpi to 1.8.4
30 Oct 2014 12:19:02
Original commit files touched by this commit  5.0.2
Revision:371747
wen search for other commits by this committer
- Update to 5.0.2

PR:		193902
Submitted by:	tkato432@yahoo.com
20 Oct 2014 13:09:42
Original commit files touched by this commit  5.0_5
Revision:371267
marino search for other commits by this committer
science/gromacs: Fix build on DragonFly (fix from dports)
28 Sep 2014 03:41:25
Original commit files touched by this commit  5.0_5
Revision:369434
danilo search for other commits by this committer
- Update net/openmpi from 1.8.2 to 1.8.3
10 Sep 2014 20:50:37
Original commit files touched by this commit  5.0_4
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
01 Sep 2014 21:50:15
Original commit files touched by this commit  5.0_3
Revision:366964
thierry search for other commits by this committer
- Upgrade to 1.5;

- Bump PORTREVISION for consumers.
31 Aug 2014 16:36:23
Original commit files touched by this commit  5.0_2
Revision:366788
tijl search for other commits by this committer
math/fftw3:
- Add USES=libtool and bump dependent ports
- Add INSTALL_TARGET=install-strip
- Remove PTHREAD_CFLAGS and PTHREAD_LIBS
- Use MAKE_CMD
26 Aug 2014 19:55:00
Original commit files touched by this commit  5.0_1
Revision:366262
thierry search for other commits by this committer
Chase the upgrade of net/mpich2.

Approved by:	portmgr (non staged ports)
10 Aug 2014 00:03:09
Original commit files touched by this commit  5.0
Revision:364488
marino search for other commits by this committer
science/gromacs: Upgrade version 4.6.5 => 5.0

PR:		191826
Submitted by:	Ports Fury
14 Jul 2014 16:51:45
Original commit files touched by this commit  4.6.5_3
Revision:361800
tijl search for other commits by this committer
- Convert net/openmpi to USES=libtool and bump dependent ports
- Add INSTALL_TARGET=install-strip
- Use BROKEN_sparc64

Approved by:	portmgr (implicit, bump unstaged port)
06 Jul 2014 09:09:15
Original commit files touched by this commit  4.6.5_2
Revision:360865
marino search for other commits by this committer
science/gromacs: Add DragonFly support (dports)
10 Mar 2014 20:55:22
Original commit files touched by this commit  4.6.5_2
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
27 Dec 2013 16:39:53
Original commit files touched by this commit  4.6.5_1
Revision:337747
tijl search for other commits by this committer
- USES=fortran.
- Fix detection of dlopen(3) to support plugins from science/vmd.
17 Dec 2013 20:36:38
Original commit files touched by this commit  4.6.5
Revision:336762
danilo search for other commits by this committer
- Update from 4.6.4 to 4.6.5 [1]
- Convert some "if's" in options helpers

PR:		ports/184903
Submitted by:	KATO Tsuguru <tkato432@yahoo.com> [1]
26 Nov 2013 17:45:42
Original commit files touched by this commit  4.6.4
Revision:334960
wg search for other commits by this committer
science/gromacs: Update to version 4.6.4

- Update to version 4.6.4
- Allow staging

PR:		ports/184224
Submitted by:	KATO Tsuguru <tkato432 yahoo.com>
26 Oct 2013 00:52:36
Original commit files touched by this commit  4.6.3_2
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  4.6.3_1
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
26 Aug 2013 16:06:38
Original commit files touched by this commit  4.6.3_1
Revision:325401
bf search for other commits by this committer
Update math/gsl to 1.16 and adjust some dependent ports
14 Aug 2013 22:35:54
Original commit files touched by this commit  4.6.3
Revision:324744  Sanity Test Failure
ak search for other commits by this committer
- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)
03 Aug 2013 08:45:52
Original commit files touched by this commit  4.6.3
Revision:324181
az search for other commits by this committer
- Convert to new perl framework
- Trim Makefile header
15 Jul 2013 14:38:37
Original commit files touched by this commit  4.6.3
Revision:323034
miwi search for other commits by this committer
- Update to 4.6.3

PR:		180503
Submitted by:	Ports Fury
04 Jun 2013 08:19:33
Original commit files touched by this commit  4.6.2
Revision:319827
miwi search for other commits by this committer
- Update to 4.6.2

PR:		179208
Submitted by:	Ports Fury
23 Apr 2013 14:20:28
Original commit files touched by this commit  4.6.1
Revision:316355
bapt search for other commits by this committer
Finish converting the whole ports tree to USES=pkgconfig
24 Mar 2013 16:27:23
Original commit files touched by this commit  4.6.1
Revision:315145
miwi search for other commits by this committer
- Update to 4.6.1

PR:		177243
Submitted by:	ports fury
22 Mar 2013 20:06:15
Original commit files touched by this commit  4.6
Revision:314960
makc search for other commits by this committer
- convert USE_CMAKE to USES
- while here clean up some ports from CMAKE_VERBOSE, which is intended
  for users

Approved by:	portmgr (miwi)
10 Feb 2013 07:56:49
Original commit files touched by this commit  4.6
Revision:312002
miwi search for other commits by this committer
- Update to 4.6

PR:		175589
Submitted by:	Ports Fury
06 Oct 2012 20:50:12
Original commit files touched by this commit  4.5.5_1
Revision:305402
flo search for other commits by this committer
- convert to optionsNG
- trim headers
- drop maintainership
17 Oct 2011 10:08:33
Original commit files touched by this commit  4.5.5_1

bf search for other commits by this committer
- update fftw3* to 3.3 [1], and adjust dependent ports
- make use of optimizations by default, where possible
(quad flavor to follow shortly, and mpi at a later date)

Suggestions and patches from:   ache, C. Burns, wen
02 Oct 2011 08:37:42
Original commit files touched by this commit  4.5.5

flo search for other commits by this committer
fix distinfo, the distfile was rerolled. Nothing major, mostly spelling fixes.

Reported by:    pav, erwin
23 Sep 2011 22:26:39
Original commit files touched by this commit  4.5.5

amdmi3 search for other commits by this committer
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
- Fix all ports that add {CPP,LD}FLAGS to *_ENV to modify flags instead

PR:             157936
Submitted by:   myself
Exp-runs by:    pav
Approved by:    pav
20 Sep 2011 15:46:47
Original commit files touched by this commit  4.5.5

flo search for other commits by this committer
- update to 4.5.5
- drop FreeBSD 6.x support
09 May 2011 16:42:28
Original commit files touched by this commit  4.5.4_1

bf search for other commits by this committer
Update math/gsl to 1.15, and adjust PORTREVISION
and LIB_DEPENDS of dependent ports
09 Apr 2011 13:25:13
Original commit files touched by this commit  4.5.4

flo search for other commits by this committer
- update to 4.5.4

PR:             ports/156214
Submitted by:   "Peter C. Lai" <cowbert@gmail.com>
27 Dec 2010 22:02:09
Original commit files touched by this commit  4.5.3

flo search for other commits by this committer
- change MAINTAINER to my @FreeBSD.org address

Approved by: jadawin (mentor)
04 Dec 2010 07:34:27
Original commit files touched by this commit  4.5.3

ade search for other commits by this committer
Sync to new bsd.autotools.mk
18 Nov 2010 15:33:39
Original commit files touched by this commit  4.5.3

pav search for other commits by this committer
- Update to 4.5.3

PR:             ports/151888
Submitted by:   Florian Smeets <flo@smeets.im> (maintainer)
22 Sep 2010 21:21:25
Original commit files touched by this commit  4.0.7_1

pgollucci search for other commits by this committer
- Update maintainer email address flo@kasimir.com -> flo@smeets.im

PR:             ports/150855
Submitted by:   maintainer
29 Mar 2010 01:12:27
Original commit files touched by this commit  4.0.7_1

wen search for other commits by this committer
- Bump PORTREVISION to chase the update of math/gsl
13 Dec 2009 00:21:04
Original commit files touched by this commit  4.0.7

miwi search for other commits by this committer
- Update to 4.0.7

PR:             141284
Submitted by:   Florian Smeets <flo@kasimir.com> (maintainer)
01 Dec 2009 20:33:45
Original commit files touched by this commit  4.0.5_1

makc search for other commits by this committer
Chase math/gsl update,
bump PORTREVISION
28 Nov 2009 10:44:56
Original commit files touched by this commit  4.0.5

thierry search for other commits by this committer
- Chase relocation of net/mpich2

- Bump PORTREVISION if needed

- Fix some portlint errors.
02 Aug 2009 19:36:34
Original commit files touched by this commit  4.0.5

mezz search for other commits by this committer
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
-Update libtool and libltdl to 2.2.6a.
-Remove devel/libtool15 and devel/libltdl15.
-Fix ports build with libtool22/libltdl22.
-Bump ports that depend on libltdl22 due to shared library version change.
-Explain what to do update in the UPDATING.

It has been tested with GNOME2, XFCE4, KDE3, KDE4 and other many wm/desktop
and applications in the runtime.

With help:      marcus and kwm
Pointyhat-exp:  a few times by pav
Tested by:      pgollucci, "Romain Tartière" <romain@blogreen.org>, and
                a few MarcusCom CVS users. Also, I might have missed a few.
Repocopy by:    marcus
Approved by:    portmgr
06 Jun 2009 22:53:25
Original commit files touched by this commit  4.0.5

miwi search for other commits by this committer
- Update to 4.0.5

PR:             135246
Submitted by:   Florian Smeets <flo@kasimir.com> (maintainer)
30 May 2009 16:17:14
Original commit files touched by this commit  4.0.3_1

rafan search for other commits by this committer
- Fix build on sparc64 by files/patch-include__gmx_cyclecounter.h
- Fix WITH_MPICH
- Use LOCALBASE for reference to bits installed by others
- Pass maintainership to the submitter
- Pet portlint(1): IGNORE

PR:             ports/133242
Submitted by:   Florian Smeets <flo at kasimir.com>
Approved by:    Stephen Montgomery-Smith <stephen at math.missouri.edu>
(maintainer)
18 May 2009 15:08:58
Original commit files touched by this commit  4.0.3_1

pav search for other commits by this committer
- Chase fftw3 update
05 Apr 2009 20:50:49
Original commit files touched by this commit  4.0.3

dhn search for other commits by this committer
- Update maintainer mail address

PR:             ports/133397
Submitted by:   Stephen Montgomery-Smith <stephen@missouri.edu> (maintainer)
Approved by:    tabthorpe (co-mentor)
16 Mar 2009 09:35:28
Original commit files touched by this commit  4.0.3

linimon search for other commits by this committer
Mark as broken on sparc64: fails to compile.
28 Feb 2009 19:49:49
Original commit files touched by this commit  4.0.3

miwi search for other commits by this committer
- Update to 4.0.3

PR:             131655
Submitted by:   Joerg Pulz <Joerg.Pulz@frm2.tum.de>
Approved by:    maintainer
21 Aug 2008 06:18:49
Original commit files touched by this commit  3.2.1_4

rafan search for other commits by this committer
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
Specifically, newer autoconf (> 2.13) has different semantic of the
configure target. In short, one should use --build=CONFIGURE_TARGET
instead of CONFIGURE_TARGET directly. Otherwise, you will get a warning
and the old semantic may be removed in later autoconf releases.

To workaround this issue, many ports hack the CONFIGURE_TARGET variable
so that it contains the ``--build='' prefix.

To solve this issue, under the fact that some ports still have
configure script generated by the old autoconf, we use runtime detection
in the do-configure target so that the proper argument can be used.

Changes to Mk/*:
 - Add runtime detection magic in bsd.port.mk
(Only the first 15 lines of the commit message are shown above View all of this commit message)
19 Apr 2008 17:56:05
Original commit files touched by this commit  3.2.1_4
  Sanity Test Failure
miwi search for other commits by this committer
- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)
22 Mar 2008 08:55:40
Original commit files touched by this commit  3.2.1_4

miwi search for other commits by this committer
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Bump PORTREVISION

Approved by:    portmgr (xorg cleanup)

Number of commits found: 110 (showing only 100 on this page)

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