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Port details on branch 2022Q2
gromacs Compute molecular dynamics
2021.5_2 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2021.5_2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-04-24 04:16:20
Last Update: 2022-04-10 19:47:23
Commit Hash: 035e778
License: LGPL21
WWW:
http://www.gromacs.org
Description:
GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. WWW: http://www.gromacs.org
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (708 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/gromacs-2021.5_2/catalog.mk
  3. /usr/local/share/licenses/gromacs-2021.5_2/LICENSE
  4. /usr/local/share/licenses/gromacs-2021.5_2/LGPL21
  5. bin/GMXRC
  6. bin/GMXRC.bash
  7. bin/GMXRC.csh
  8. bin/GMXRC.zsh
  9. bin/demux.pl
  10. bin/gmx_d
  11. bin/gmx-completion-gmx_d.bash
  12. bin/gmx-completion.bash
  13. bin/xplor2gmx.pl
  14. include/gmxapi/compat/mdparams.h
  15. include/gmxapi/compat/tpr.h
  16. include/gmxapi/context.h
  17. include/gmxapi/exceptions.h
  18. include/gmxapi/gmxapi.h
  19. include/gmxapi/gmxapicompat.h
  20. include/gmxapi/gromacsfwd.h
  21. include/gmxapi/md.h
  22. include/gmxapi/md/mdmodule.h
  23. include/gmxapi/md/mdsignals.h
  24. include/gmxapi/mpi/gmxapi_mpi.h
  25. include/gmxapi/mpi/resourceassignment.h
  26. include/gmxapi/session.h
  27. include/gmxapi/session/resources.h
  28. include/gmxapi/status.h
  29. include/gmxapi/system.h
  30. include/gmxapi/version.h
  31. include/gromacs/analysisdata.h
  32. include/gromacs/analysisdata/abstractdata.h
  33. include/gromacs/analysisdata/analysisdata.h
  34. include/gromacs/analysisdata/arraydata.h
  35. include/gromacs/analysisdata/dataframe.h
  36. include/gromacs/analysisdata/datamodule.h
  37. include/gromacs/analysisdata/modules/average.h
  38. include/gromacs/analysisdata/modules/displacement.h
  39. include/gromacs/analysisdata/modules/histogram.h
  40. include/gromacs/analysisdata/modules/lifetime.h
  41. include/gromacs/analysisdata/modules/plot.h
  42. include/gromacs/external/boost/stl_interfaces/fwd.hpp
  43. include/gromacs/external/boost/stl_interfaces/iterator_interface.hpp
  44. include/gromacs/fileio/confio.h
  45. include/gromacs/fileio/filetypes.h
  46. include/gromacs/fileio/oenv.h
  47. include/gromacs/fileio/pdbio.h
  48. include/gromacs/fileio/tpxio.h
  49. include/gromacs/fileio/trxio.h
  50. include/gromacs/math/do_fit.h
  51. include/gromacs/math/functions.h
  52. include/gromacs/math/units.h
  53. include/gromacs/math/utilities.h
  54. include/gromacs/math/vec.h
  55. include/gromacs/math/vectypes.h
  56. include/gromacs/mdrun/simulationinputhandle.h
  57. include/gromacs/mdtypes/inputrec.h
  58. include/gromacs/mdtypes/md_enums.h
  59. include/gromacs/options.h
  60. include/gromacs/options/abstractoption.h
  61. include/gromacs/options/basicoptions.h
  62. include/gromacs/options/filenameoption.h
  63. include/gromacs/options/filenameoptionmanager.h
  64. include/gromacs/options/ioptionsbehavior.h
  65. include/gromacs/options/ioptionscontainer.h
  66. include/gromacs/options/ioptionscontainerwithsections.h
  67. include/gromacs/options/ivaluestore.h
  68. include/gromacs/options/optionfiletype.h
  69. include/gromacs/options/optionflags.h
  70. include/gromacs/options/options.h
  71. include/gromacs/options/timeunitmanager.h
  72. include/gromacs/pbcutil/pbc.h
  73. include/gromacs/restraint/restraintpotential.h
  74. include/gromacs/selection.h
  75. include/gromacs/selection/indexutil.h
  76. include/gromacs/selection/nbsearch.h
  77. include/gromacs/selection/position.h
  78. include/gromacs/selection/selection.h
  79. include/gromacs/selection/selectioncollection.h
  80. include/gromacs/selection/selectionenums.h
  81. include/gromacs/selection/selectionoption.h
  82. include/gromacs/selection/selectionoptionbehavior.h
  83. include/gromacs/selection/selectionoptionmanager.h
  84. include/gromacs/topology/atomprop.h
  85. include/gromacs/topology/atoms.h
  86. include/gromacs/topology/block.h
  87. include/gromacs/topology/forcefieldparameters.h
  88. include/gromacs/topology/idef.h
  89. include/gromacs/topology/ifunc.h
  90. include/gromacs/topology/index.h
  91. include/gromacs/topology/symtab.h
  92. include/gromacs/topology/topology.h
  93. include/gromacs/trajectory/trajectoryframe.h
  94. include/gromacs/trajectoryanalysis.h
  95. include/gromacs/trajectoryanalysis/analysismodule.h
  96. include/gromacs/trajectoryanalysis/analysissettings.h
  97. include/gromacs/trajectoryanalysis/cmdlinerunner.h
  98. include/gromacs/trajectoryanalysis/topologyinformation.h
  99. include/gromacs/utility/arrayref.h
  100. include/gromacs/utility/basedefinitions.h
  101. include/gromacs/utility/baseversion.h
  102. include/gromacs/utility/classhelpers.h
  103. include/gromacs/utility/current_function.h
  104. include/gromacs/utility/enumerationhelpers.h
  105. include/gromacs/utility/exceptions.h
  106. include/gromacs/utility/fileptr.h
  107. include/gromacs/utility/flags.h
  108. include/gromacs/utility/futil.h
  109. include/gromacs/utility/gmxassert.h
  110. include/gromacs/utility/listoflists.h
  111. include/gromacs/utility/pleasecite.h
  112. include/gromacs/utility/programcontext.h
  113. include/gromacs/utility/range.h
  114. include/gromacs/utility/real.h
  115. include/gromacs/utility/smalloc.h
  116. include/gromacs/utility/stringutil.h
  117. include/gromacs/utility/unique_cptr.h
  118. include/gromacs/version.h
  119. include/nblib/basicdefinitions.h
  120. include/nblib/box.h
  121. include/nblib/exception.h
  122. include/nblib/forcecalculator.h
  123. include/nblib/integrator.h
  124. include/nblib/interactions.h
  125. include/nblib/kerneloptions.h
  126. include/nblib/listed_forces/bondtypes.h
  127. include/nblib/listed_forces/calculator.h
  128. include/nblib/listed_forces/definitions.h
  129. include/nblib/molecules.h
  130. include/nblib/nblib.h
  131. include/nblib/particlesequencer.h
  132. include/nblib/particletype.h
  133. include/nblib/simulationstate.h
  134. include/nblib/topology.h
  135. include/nblib/util/setup.h
  136. include/nblib/util/traits.hpp
  137. include/nblib/util/util.hpp
  138. include/nblib/vector.h
  139. lib/libgmxapi_d.so
  140. lib/libgmxapi_d.so.0
  141. lib/libgmxapi_d.so.0.2.1
  142. lib/libgromacs_d.so
  143. lib/libgromacs_d.so.6
  144. lib/libgromacs_d.so.6.0.0
  145. lib/libnblib.so
  146. lib/libnblib.so.0
  147. lib/libnblib.so.0.1.0
  148. libdata/pkgconfig/libgromacs_d.pc
  149. share/cmake/gmxapi/gmxapi-config-version.cmake
  150. share/cmake/gmxapi/gmxapi-config.cmake
  151. share/cmake/gmxapi/gmxapi-release.cmake
  152. share/cmake/gmxapi/gmxapi.cmake
  153. share/cmake/gromacs_d/gromacs_d-config-version.cmake
  154. share/cmake/gromacs_d/gromacs_d-config.cmake
  155. share/cmake/gromacs_d/gromacs-toolchain_d.cmake
  156. share/cmake/gromacs_d/libgromacs-release.cmake
  157. share/cmake/gromacs_d/libgromacs.cmake
  158. share/gromacs/COPYING
  159. share/gromacs/README.tutor
  160. share/gromacs/README_FreeEnergyModifications.txt
  161. @comment share/gromacs/opencl/nbnxn_ocl_kernel_amd.clh
  162. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nowarp.clh
  163. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nvidia.clh
  164. @comment share/gromacs/opencl/nbnxn_ocl_kernel_pruneonly.clh
  165. @comment share/gromacs/opencl/nbnxn_ocl_kernel_utils.clh
  166. @comment share/gromacs/opencl/nbnxn_ocl_kernels.cl
  167. @comment share/gromacs/opencl/nbnxn_ocl_kernels.clh
  168. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen.clh
  169. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen_add_twincut.clh
  170. @comment share/gromacs/opencl/vectype_ops.clh
  171. share/gromacs/template/CMakeLists.txt
  172. share/gromacs/template/Makefile.pkg
  173. share/gromacs/template/README
  174. share/gromacs/template/cmake/FindGROMACS.cmake
  175. share/gromacs/template/template.cpp
  176. share/gromacs/top/README
  177. share/gromacs/top/amber03.ff/aminoacids.arn
  178. share/gromacs/top/amber03.ff/aminoacids.c.tdb
  179. share/gromacs/top/amber03.ff/aminoacids.hdb
  180. share/gromacs/top/amber03.ff/aminoacids.n.tdb
  181. share/gromacs/top/amber03.ff/aminoacids.r2b
  182. share/gromacs/top/amber03.ff/aminoacids.rtp
  183. share/gromacs/top/amber03.ff/aminoacids.vsd
  184. share/gromacs/top/amber03.ff/atomtypes.atp
  185. share/gromacs/top/amber03.ff/dna.arn
  186. share/gromacs/top/amber03.ff/dna.hdb
  187. share/gromacs/top/amber03.ff/dna.r2b
  188. share/gromacs/top/amber03.ff/dna.rtp
  189. share/gromacs/top/amber03.ff/ffbonded.itp
  190. share/gromacs/top/amber03.ff/ffnonbonded.itp
  191. share/gromacs/top/amber03.ff/forcefield.doc
  192. share/gromacs/top/amber03.ff/forcefield.itp
  193. share/gromacs/top/amber03.ff/ions.itp
  194. share/gromacs/top/amber03.ff/rna.arn
  195. share/gromacs/top/amber03.ff/rna.hdb
  196. share/gromacs/top/amber03.ff/rna.r2b
  197. share/gromacs/top/amber03.ff/rna.rtp
  198. share/gromacs/top/amber03.ff/spc.itp
  199. share/gromacs/top/amber03.ff/spce.itp
  200. share/gromacs/top/amber03.ff/tip3p.itp
  201. share/gromacs/top/amber03.ff/tip4p.itp
  202. share/gromacs/top/amber03.ff/tip4pew.itp
  203. share/gromacs/top/amber03.ff/tip5p.itp
  204. share/gromacs/top/amber03.ff/urea.itp
  205. share/gromacs/top/amber03.ff/watermodels.dat
  206. share/gromacs/top/amber94.ff/aminoacids.arn
  207. share/gromacs/top/amber94.ff/aminoacids.c.tdb
  208. share/gromacs/top/amber94.ff/aminoacids.hdb
  209. share/gromacs/top/amber94.ff/aminoacids.n.tdb
  210. share/gromacs/top/amber94.ff/aminoacids.r2b
  211. share/gromacs/top/amber94.ff/aminoacids.rtp
  212. share/gromacs/top/amber94.ff/aminoacids.vsd
  213. share/gromacs/top/amber94.ff/atomtypes.atp
  214. share/gromacs/top/amber94.ff/dna.arn
  215. share/gromacs/top/amber94.ff/dna.hdb
  216. share/gromacs/top/amber94.ff/dna.r2b
  217. share/gromacs/top/amber94.ff/dna.rtp
  218. share/gromacs/top/amber94.ff/ffbonded.itp
  219. share/gromacs/top/amber94.ff/ffnonbonded.itp
  220. share/gromacs/top/amber94.ff/forcefield.doc
  221. share/gromacs/top/amber94.ff/forcefield.itp
  222. share/gromacs/top/amber94.ff/ions.itp
  223. share/gromacs/top/amber94.ff/rna.arn
  224. share/gromacs/top/amber94.ff/rna.hdb
  225. share/gromacs/top/amber94.ff/rna.r2b
  226. share/gromacs/top/amber94.ff/rna.rtp
  227. share/gromacs/top/amber94.ff/spc.itp
  228. share/gromacs/top/amber94.ff/spce.itp
  229. share/gromacs/top/amber94.ff/tip3p.itp
  230. share/gromacs/top/amber94.ff/tip4p.itp
  231. share/gromacs/top/amber94.ff/tip4pew.itp
  232. share/gromacs/top/amber94.ff/tip5p.itp
  233. share/gromacs/top/amber94.ff/urea.itp
  234. share/gromacs/top/amber94.ff/watermodels.dat
  235. share/gromacs/top/amber96.ff/aminoacids.arn
  236. share/gromacs/top/amber96.ff/aminoacids.c.tdb
  237. share/gromacs/top/amber96.ff/aminoacids.hdb
  238. share/gromacs/top/amber96.ff/aminoacids.n.tdb
  239. share/gromacs/top/amber96.ff/aminoacids.r2b
  240. share/gromacs/top/amber96.ff/aminoacids.rtp
  241. share/gromacs/top/amber96.ff/aminoacids.vsd
  242. share/gromacs/top/amber96.ff/atomtypes.atp
  243. share/gromacs/top/amber96.ff/dna.arn
  244. share/gromacs/top/amber96.ff/dna.hdb
  245. share/gromacs/top/amber96.ff/dna.r2b
  246. share/gromacs/top/amber96.ff/dna.rtp
  247. share/gromacs/top/amber96.ff/ffbonded.itp
  248. share/gromacs/top/amber96.ff/ffnonbonded.itp
  249. share/gromacs/top/amber96.ff/forcefield.doc
  250. share/gromacs/top/amber96.ff/forcefield.itp
  251. share/gromacs/top/amber96.ff/ions.itp
  252. share/gromacs/top/amber96.ff/rna.arn
  253. share/gromacs/top/amber96.ff/rna.hdb
  254. share/gromacs/top/amber96.ff/rna.r2b
  255. share/gromacs/top/amber96.ff/rna.rtp
  256. share/gromacs/top/amber96.ff/spc.itp
  257. share/gromacs/top/amber96.ff/spce.itp
  258. share/gromacs/top/amber96.ff/tip3p.itp
  259. share/gromacs/top/amber96.ff/tip4p.itp
  260. share/gromacs/top/amber96.ff/tip4pew.itp
  261. share/gromacs/top/amber96.ff/tip5p.itp
  262. share/gromacs/top/amber96.ff/urea.itp
  263. share/gromacs/top/amber96.ff/watermodels.dat
  264. share/gromacs/top/amber99.ff/aminoacids.arn
  265. share/gromacs/top/amber99.ff/aminoacids.c.tdb
  266. share/gromacs/top/amber99.ff/aminoacids.hdb
  267. share/gromacs/top/amber99.ff/aminoacids.n.tdb
  268. share/gromacs/top/amber99.ff/aminoacids.r2b
  269. share/gromacs/top/amber99.ff/aminoacids.rtp
  270. share/gromacs/top/amber99.ff/aminoacids.vsd
  271. share/gromacs/top/amber99.ff/atomtypes.atp
  272. share/gromacs/top/amber99.ff/dna.arn
  273. share/gromacs/top/amber99.ff/dna.hdb
  274. share/gromacs/top/amber99.ff/dna.r2b
  275. share/gromacs/top/amber99.ff/dna.rtp
  276. share/gromacs/top/amber99.ff/ffbonded.itp
  277. share/gromacs/top/amber99.ff/ffnonbonded.itp
  278. share/gromacs/top/amber99.ff/forcefield.doc
  279. share/gromacs/top/amber99.ff/forcefield.itp
  280. share/gromacs/top/amber99.ff/ions.itp
  281. share/gromacs/top/amber99.ff/rna.arn
  282. share/gromacs/top/amber99.ff/rna.hdb
  283. share/gromacs/top/amber99.ff/rna.r2b
  284. share/gromacs/top/amber99.ff/rna.rtp
  285. share/gromacs/top/amber99.ff/spc.itp
  286. share/gromacs/top/amber99.ff/spce.itp
  287. share/gromacs/top/amber99.ff/tip3p.itp
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  289. share/gromacs/top/amber99.ff/tip4pew.itp
  290. share/gromacs/top/amber99.ff/tip5p.itp
  291. share/gromacs/top/amber99.ff/urea.itp
  292. share/gromacs/top/amber99.ff/watermodels.dat
  293. share/gromacs/top/amber99sb-ildn.ff/aminoacids.arn
  294. share/gromacs/top/amber99sb-ildn.ff/aminoacids.c.tdb
  295. share/gromacs/top/amber99sb-ildn.ff/aminoacids.hdb
  296. share/gromacs/top/amber99sb-ildn.ff/aminoacids.n.tdb
  297. share/gromacs/top/amber99sb-ildn.ff/aminoacids.r2b
  298. share/gromacs/top/amber99sb-ildn.ff/aminoacids.rtp
  299. share/gromacs/top/amber99sb-ildn.ff/aminoacids.vsd
  300. share/gromacs/top/amber99sb-ildn.ff/atomtypes.atp
  301. share/gromacs/top/amber99sb-ildn.ff/dna.arn
  302. share/gromacs/top/amber99sb-ildn.ff/dna.hdb
  303. share/gromacs/top/amber99sb-ildn.ff/dna.r2b
  304. share/gromacs/top/amber99sb-ildn.ff/dna.rtp
  305. share/gromacs/top/amber99sb-ildn.ff/ffbonded.itp
  306. share/gromacs/top/amber99sb-ildn.ff/ffnonbonded.itp
  307. share/gromacs/top/amber99sb-ildn.ff/forcefield.doc
  308. share/gromacs/top/amber99sb-ildn.ff/forcefield.itp
  309. share/gromacs/top/amber99sb-ildn.ff/ions.itp
  310. share/gromacs/top/amber99sb-ildn.ff/rna.arn
  311. share/gromacs/top/amber99sb-ildn.ff/rna.hdb
  312. share/gromacs/top/amber99sb-ildn.ff/rna.r2b
  313. share/gromacs/top/amber99sb-ildn.ff/rna.rtp
  314. share/gromacs/top/amber99sb-ildn.ff/spc.itp
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  320. share/gromacs/top/amber99sb-ildn.ff/urea.itp
  321. share/gromacs/top/amber99sb-ildn.ff/watermodels.dat
  322. share/gromacs/top/amber99sb.ff/aminoacids.arn
  323. share/gromacs/top/amber99sb.ff/aminoacids.c.tdb
  324. share/gromacs/top/amber99sb.ff/aminoacids.hdb
  325. share/gromacs/top/amber99sb.ff/aminoacids.n.tdb
  326. share/gromacs/top/amber99sb.ff/aminoacids.r2b
  327. share/gromacs/top/amber99sb.ff/aminoacids.rtp
  328. share/gromacs/top/amber99sb.ff/aminoacids.vsd
  329. share/gromacs/top/amber99sb.ff/atomtypes.atp
  330. share/gromacs/top/amber99sb.ff/dna.arn
  331. share/gromacs/top/amber99sb.ff/dna.hdb
  332. share/gromacs/top/amber99sb.ff/dna.r2b
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  334. share/gromacs/top/amber99sb.ff/ffbonded.itp
  335. share/gromacs/top/amber99sb.ff/ffnonbonded.itp
  336. share/gromacs/top/amber99sb.ff/forcefield.doc
  337. share/gromacs/top/amber99sb.ff/forcefield.itp
  338. share/gromacs/top/amber99sb.ff/ions.itp
  339. share/gromacs/top/amber99sb.ff/rna.arn
  340. share/gromacs/top/amber99sb.ff/rna.hdb
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  349. share/gromacs/top/amber99sb.ff/urea.itp
  350. share/gromacs/top/amber99sb.ff/watermodels.dat
  351. share/gromacs/top/amberGS.ff/aminoacids.arn
  352. share/gromacs/top/amberGS.ff/aminoacids.c.tdb
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  357. share/gromacs/top/amberGS.ff/aminoacids.vsd
  358. share/gromacs/top/amberGS.ff/atomtypes.atp
  359. share/gromacs/top/amberGS.ff/dna.arn
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  361. share/gromacs/top/amberGS.ff/dna.r2b
  362. share/gromacs/top/amberGS.ff/dna.rtp
  363. share/gromacs/top/amberGS.ff/ffbonded.itp
  364. share/gromacs/top/amberGS.ff/ffnonbonded.itp
  365. share/gromacs/top/amberGS.ff/forcefield.doc
  366. share/gromacs/top/amberGS.ff/forcefield.itp
  367. share/gromacs/top/amberGS.ff/ions.itp
  368. share/gromacs/top/amberGS.ff/rna.arn
  369. share/gromacs/top/amberGS.ff/rna.hdb
  370. share/gromacs/top/amberGS.ff/rna.r2b
  371. share/gromacs/top/amberGS.ff/rna.rtp
  372. share/gromacs/top/amberGS.ff/spc.itp
  373. share/gromacs/top/amberGS.ff/spce.itp
  374. share/gromacs/top/amberGS.ff/tip3p.itp
  375. share/gromacs/top/amberGS.ff/tip4p.itp
  376. share/gromacs/top/amberGS.ff/tip4pew.itp
  377. share/gromacs/top/amberGS.ff/tip5p.itp
  378. share/gromacs/top/amberGS.ff/urea.itp
  379. share/gromacs/top/amberGS.ff/watermodels.dat
  380. share/gromacs/top/atom_nom.tbl
  381. share/gromacs/top/atommass.dat
  382. share/gromacs/top/bonds.dlg
  383. share/gromacs/top/ca-shift.dat
  384. share/gromacs/top/cb-shift.dat
  385. share/gromacs/top/charmm27.ff/aminoacids.arn
  386. share/gromacs/top/charmm27.ff/aminoacids.c.tdb
  387. share/gromacs/top/charmm27.ff/aminoacids.hdb
  388. share/gromacs/top/charmm27.ff/aminoacids.n.tdb
  389. share/gromacs/top/charmm27.ff/aminoacids.r2b
  390. share/gromacs/top/charmm27.ff/aminoacids.rtp
  391. share/gromacs/top/charmm27.ff/aminoacids.vsd
  392. share/gromacs/top/charmm27.ff/atomtypes.atp
  393. share/gromacs/top/charmm27.ff/cmap.itp
  394. share/gromacs/top/charmm27.ff/dna.arn
  395. share/gromacs/top/charmm27.ff/dna.c.tdb
  396. share/gromacs/top/charmm27.ff/dna.hdb
  397. share/gromacs/top/charmm27.ff/dna.n.tdb
  398. share/gromacs/top/charmm27.ff/dna.rtp
  399. share/gromacs/top/charmm27.ff/ffbonded.itp
  400. share/gromacs/top/charmm27.ff/ffnabonded.itp
  401. share/gromacs/top/charmm27.ff/ffnanonbonded.itp
  402. share/gromacs/top/charmm27.ff/ffnonbonded.itp
  403. share/gromacs/top/charmm27.ff/forcefield.doc
  404. share/gromacs/top/charmm27.ff/forcefield.itp
  405. share/gromacs/top/charmm27.ff/ions.itp
  406. share/gromacs/top/charmm27.ff/lipids.hdb
  407. share/gromacs/top/charmm27.ff/lipids.rtp
  408. share/gromacs/top/charmm27.ff/rna.arn
  409. share/gromacs/top/charmm27.ff/rna.c.tdb
  410. share/gromacs/top/charmm27.ff/rna.hdb
  411. share/gromacs/top/charmm27.ff/rna.n.tdb
  412. share/gromacs/top/charmm27.ff/rna.r2b
  413. share/gromacs/top/charmm27.ff/rna.rtp
  414. share/gromacs/top/charmm27.ff/spc.itp
  415. share/gromacs/top/charmm27.ff/spce.itp
  416. share/gromacs/top/charmm27.ff/tip3p.itp
  417. share/gromacs/top/charmm27.ff/tip4p.itp
  418. share/gromacs/top/charmm27.ff/tip5p.itp
  419. share/gromacs/top/charmm27.ff/tips3p.itp
  420. share/gromacs/top/charmm27.ff/watermodels.dat
  421. share/gromacs/top/co-shift.dat
  422. share/gromacs/top/defselection.dat
  423. share/gromacs/top/dgsolv.dat
  424. share/gromacs/top/edissoc.dat
  425. share/gromacs/top/electroneg.dat
  426. share/gromacs/top/elements.dat
  427. share/gromacs/top/export.dlg
  428. share/gromacs/top/ffG43a1.itp
  429. share/gromacs/top/ffG43a2.itp
  430. share/gromacs/top/ffG45a3.itp
  431. share/gromacs/top/ffG53a5.itp
  432. share/gromacs/top/ffG53a6.itp
  433. share/gromacs/top/ffoplsaa-n.tst
  434. share/gromacs/top/ffoplsaa.itp
  435. share/gromacs/top/flexspc.itp
  436. share/gromacs/top/flexspce.itp
  437. share/gromacs/top/flexwat-ferguson.itp
  438. share/gromacs/top/gromos43a1.ff/aminoacids.c.tdb
  439. share/gromacs/top/gromos43a1.ff/aminoacids.hdb
  440. share/gromacs/top/gromos43a1.ff/aminoacids.n.tdb
  441. share/gromacs/top/gromos43a1.ff/aminoacids.r2b
  442. share/gromacs/top/gromos43a1.ff/aminoacids.rtp
  443. share/gromacs/top/gromos43a1.ff/aminoacids.vsd
  444. share/gromacs/top/gromos43a1.ff/atomtypes.atp
  445. share/gromacs/top/gromos43a1.ff/ff_dum.itp
  446. share/gromacs/top/gromos43a1.ff/ffbonded.itp
  447. share/gromacs/top/gromos43a1.ff/ffnonbonded.itp
  448. share/gromacs/top/gromos43a1.ff/forcefield.doc
  449. share/gromacs/top/gromos43a1.ff/forcefield.itp
  450. share/gromacs/top/gromos43a1.ff/ions.itp
  451. share/gromacs/top/gromos43a1.ff/methanol.itp
  452. share/gromacs/top/gromos43a1.ff/methanol216.gro
  453. share/gromacs/top/gromos43a1.ff/spc.itp
  454. share/gromacs/top/gromos43a1.ff/spce.itp
  455. share/gromacs/top/gromos43a1.ff/tip3p.itp
  456. share/gromacs/top/gromos43a1.ff/tip4p.itp
  457. share/gromacs/top/gromos43a1.ff/watermodels.dat
  458. share/gromacs/top/gromos43a2.ff/aminoacids.c.tdb
  459. share/gromacs/top/gromos43a2.ff/aminoacids.hdb
  460. share/gromacs/top/gromos43a2.ff/aminoacids.n.tdb
  461. share/gromacs/top/gromos43a2.ff/aminoacids.r2b
  462. share/gromacs/top/gromos43a2.ff/aminoacids.rtp
  463. share/gromacs/top/gromos43a2.ff/aminoacids.vsd
  464. share/gromacs/top/gromos43a2.ff/atomtypes.atp
  465. share/gromacs/top/gromos43a2.ff/ff_dum.itp
  466. share/gromacs/top/gromos43a2.ff/ffbonded.itp
  467. share/gromacs/top/gromos43a2.ff/ffnonbonded.itp
  468. share/gromacs/top/gromos43a2.ff/forcefield.doc
  469. share/gromacs/top/gromos43a2.ff/forcefield.itp
  470. share/gromacs/top/gromos43a2.ff/ions.itp
  471. share/gromacs/top/gromos43a2.ff/spc.itp
  472. share/gromacs/top/gromos43a2.ff/spce.itp
  473. share/gromacs/top/gromos43a2.ff/tip3p.itp
  474. share/gromacs/top/gromos43a2.ff/tip4p.itp
  475. share/gromacs/top/gromos43a2.ff/watermodels.dat
  476. share/gromacs/top/gromos45a3.ff/aminoacids.c.tdb
  477. share/gromacs/top/gromos45a3.ff/aminoacids.hdb
  478. share/gromacs/top/gromos45a3.ff/aminoacids.n.tdb
  479. share/gromacs/top/gromos45a3.ff/aminoacids.r2b
  480. share/gromacs/top/gromos45a3.ff/aminoacids.rtp
  481. share/gromacs/top/gromos45a3.ff/aminoacids.vsd
  482. share/gromacs/top/gromos45a3.ff/atomtypes.atp
  483. share/gromacs/top/gromos45a3.ff/ff_dum.itp
  484. share/gromacs/top/gromos45a3.ff/ffbonded.itp
  485. share/gromacs/top/gromos45a3.ff/ffnonbonded.itp
  486. share/gromacs/top/gromos45a3.ff/forcefield.doc
  487. share/gromacs/top/gromos45a3.ff/forcefield.itp
  488. share/gromacs/top/gromos45a3.ff/ions.itp
  489. share/gromacs/top/gromos45a3.ff/spc.itp
  490. share/gromacs/top/gromos45a3.ff/spce.itp
  491. share/gromacs/top/gromos45a3.ff/tip3p.itp
  492. share/gromacs/top/gromos45a3.ff/tip4p.itp
  493. share/gromacs/top/gromos45a3.ff/watermodels.dat
  494. share/gromacs/top/gromos53a5.ff/aminoacids.c.tdb
  495. share/gromacs/top/gromos53a5.ff/aminoacids.hdb
  496. share/gromacs/top/gromos53a5.ff/aminoacids.n.tdb
  497. share/gromacs/top/gromos53a5.ff/aminoacids.r2b
  498. share/gromacs/top/gromos53a5.ff/aminoacids.rtp
  499. share/gromacs/top/gromos53a5.ff/aminoacids.vsd
  500. share/gromacs/top/gromos53a5.ff/atomname2type.n2t
  501. share/gromacs/top/gromos53a5.ff/atomtypes.atp
  502. share/gromacs/top/gromos53a5.ff/ff_dum.itp
  503. share/gromacs/top/gromos53a5.ff/ffbonded.itp
  504. share/gromacs/top/gromos53a5.ff/ffnonbonded.itp
  505. share/gromacs/top/gromos53a5.ff/forcefield.doc
  506. share/gromacs/top/gromos53a5.ff/forcefield.itp
  507. share/gromacs/top/gromos53a5.ff/ions.itp
  508. share/gromacs/top/gromos53a5.ff/spc.itp
  509. share/gromacs/top/gromos53a5.ff/spce.itp
  510. share/gromacs/top/gromos53a5.ff/tip3p.itp
  511. share/gromacs/top/gromos53a5.ff/tip4p.itp
  512. share/gromacs/top/gromos53a5.ff/watermodels.dat
  513. share/gromacs/top/gromos53a6.ff/aminoacids.c.tdb
  514. share/gromacs/top/gromos53a6.ff/aminoacids.hdb
  515. share/gromacs/top/gromos53a6.ff/aminoacids.n.tdb
  516. share/gromacs/top/gromos53a6.ff/aminoacids.r2b
  517. share/gromacs/top/gromos53a6.ff/aminoacids.rtp
  518. share/gromacs/top/gromos53a6.ff/aminoacids.vsd
  519. share/gromacs/top/gromos53a6.ff/atomtypes.atp
  520. share/gromacs/top/gromos53a6.ff/ff_dum.itp
  521. share/gromacs/top/gromos53a6.ff/ffbonded.itp
  522. share/gromacs/top/gromos53a6.ff/ffnonbonded.itp
  523. share/gromacs/top/gromos53a6.ff/forcefield.doc
  524. share/gromacs/top/gromos53a6.ff/forcefield.itp
  525. share/gromacs/top/gromos53a6.ff/ions.itp
  526. share/gromacs/top/gromos53a6.ff/spc.itp
  527. share/gromacs/top/gromos53a6.ff/spce.itp
  528. share/gromacs/top/gromos53a6.ff/tip3p.itp
  529. share/gromacs/top/gromos53a6.ff/tip4p.itp
  530. share/gromacs/top/gromos53a6.ff/watermodels.dat
  531. share/gromacs/top/gromos54a7.ff/aminoacids.c.tdb
  532. share/gromacs/top/gromos54a7.ff/aminoacids.hdb
  533. share/gromacs/top/gromos54a7.ff/aminoacids.n.tdb
  534. share/gromacs/top/gromos54a7.ff/aminoacids.r2b
  535. share/gromacs/top/gromos54a7.ff/aminoacids.rtp
  536. share/gromacs/top/gromos54a7.ff/aminoacids.vsd
  537. share/gromacs/top/gromos54a7.ff/atomtypes.atp
  538. share/gromacs/top/gromos54a7.ff/dppc.itp
  539. share/gromacs/top/gromos54a7.ff/ff_dum.itp
  540. share/gromacs/top/gromos54a7.ff/ffbonded.itp
  541. share/gromacs/top/gromos54a7.ff/ffnonbonded.itp
  542. share/gromacs/top/gromos54a7.ff/forcefield.doc
  543. share/gromacs/top/gromos54a7.ff/forcefield.itp
  544. share/gromacs/top/gromos54a7.ff/ions.itp
  545. share/gromacs/top/gromos54a7.ff/popc.itp
  546. share/gromacs/top/gromos54a7.ff/spc.itp
  547. share/gromacs/top/gromos54a7.ff/spce.itp
  548. share/gromacs/top/gromos54a7.ff/tip3p.itp
  549. share/gromacs/top/gromos54a7.ff/tip4p.itp
  550. share/gromacs/top/gromos54a7.ff/tmcl.itp
  551. share/gromacs/top/gromos54a7.ff/watermodels.dat
  552. share/gromacs/top/ha-shift.dat
  553. share/gromacs/top/ions.itp
  554. share/gromacs/top/nsfactor.dat
  555. share/gromacs/top/oplsaa.ff/1propanol.itp
  556. share/gromacs/top/oplsaa.ff/aminoacids.c.tdb
  557. share/gromacs/top/oplsaa.ff/aminoacids.hdb
  558. share/gromacs/top/oplsaa.ff/aminoacids.n.tdb
  559. share/gromacs/top/oplsaa.ff/aminoacids.r2b
  560. share/gromacs/top/oplsaa.ff/aminoacids.rtp
  561. share/gromacs/top/oplsaa.ff/aminoacids.vsd
  562. share/gromacs/top/oplsaa.ff/atomname2type.n2t
  563. share/gromacs/top/oplsaa.ff/atomtypes.atp
  564. share/gromacs/top/oplsaa.ff/ethanol.itp
  565. share/gromacs/top/oplsaa.ff/ffbonded.itp
  566. share/gromacs/top/oplsaa.ff/ffnonbonded.itp
  567. share/gromacs/top/oplsaa.ff/forcefield.doc
  568. share/gromacs/top/oplsaa.ff/forcefield.itp
  569. share/gromacs/top/oplsaa.ff/ions.itp
  570. share/gromacs/top/oplsaa.ff/methanol.itp
  571. share/gromacs/top/oplsaa.ff/spc.itp
  572. share/gromacs/top/oplsaa.ff/spce.itp
  573. share/gromacs/top/oplsaa.ff/tip3p.itp
  574. share/gromacs/top/oplsaa.ff/tip4p.itp
  575. share/gromacs/top/oplsaa.ff/tip4pew.itp
  576. share/gromacs/top/oplsaa.ff/tip5p.itp
  577. share/gromacs/top/oplsaa.ff/tip5pe.itp
  578. share/gromacs/top/oplsaa.ff/watermodels.dat
  579. share/gromacs/top/phbres.dat
  580. share/gromacs/top/ps.m2p
  581. share/gromacs/top/random.dat
  582. share/gromacs/top/refi_aa.dat
  583. share/gromacs/top/residues.dtd
  584. share/gromacs/top/residues.xml
  585. share/gromacs/top/residuetypes.dat
  586. share/gromacs/top/sfactor.dat
  587. share/gromacs/top/spc.itp
  588. share/gromacs/top/spc216.gro
  589. share/gromacs/top/spce.itp
  590. share/gromacs/top/specbond.dat
  591. share/gromacs/top/ss.map
  592. share/gromacs/top/surface.dat
  593. share/gromacs/top/sw.itp
  594. share/gromacs/top/table6-10.xvg
  595. share/gromacs/top/table6-11.xvg
  596. share/gromacs/top/table6-12.xvg
  597. share/gromacs/top/table6-8.xvg
  598. share/gromacs/top/table6-9.xvg
  599. share/gromacs/top/tip3p.itp
  600. share/gromacs/top/tip4p.gro
  601. share/gromacs/top/tip4p.itp
  602. share/gromacs/top/tip5p.gro
  603. share/gromacs/top/vdw-msms.dat
  604. share/gromacs/top/vdwradii.dat
  605. share/gromacs/top/xlateat.dat
  606. man/man1/gmx-anaeig.1.gz
  607. man/man1/gmx-analyze.1.gz
  608. man/man1/gmx-angle.1.gz
  609. man/man1/gmx-awh.1.gz
  610. man/man1/gmx-bar.1.gz
  611. man/man1/gmx-bundle.1.gz
  612. man/man1/gmx-check.1.gz
  613. man/man1/gmx-chi.1.gz
  614. man/man1/gmx-cluster.1.gz
  615. man/man1/gmx-clustsize.1.gz
  616. man/man1/gmx-confrms.1.gz
  617. man/man1/gmx-convert-tpr.1.gz
  618. man/man1/gmx-convert-trj.1.gz
  619. man/man1/gmx-covar.1.gz
  620. man/man1/gmx-current.1.gz
  621. man/man1/gmx-density.1.gz
  622. man/man1/gmx-densmap.1.gz
  623. man/man1/gmx-densorder.1.gz
  624. man/man1/gmx-dielectric.1.gz
  625. man/man1/gmx-dipoles.1.gz
  626. man/man1/gmx-disre.1.gz
  627. man/man1/gmx-distance.1.gz
  628. man/man1/gmx-do_dssp.1.gz
  629. man/man1/gmx-dos.1.gz
  630. man/man1/gmx-dump.1.gz
  631. man/man1/gmx-dyecoupl.1.gz
  632. man/man1/gmx-editconf.1.gz
  633. man/man1/gmx-eneconv.1.gz
  634. man/man1/gmx-enemat.1.gz
  635. man/man1/gmx-energy.1.gz
  636. man/man1/gmx-extract-cluster.1.gz
  637. man/man1/gmx-filter.1.gz
  638. man/man1/gmx-freevolume.1.gz
  639. man/man1/gmx-gangle.1.gz
  640. man/man1/gmx-genconf.1.gz
  641. man/man1/gmx-genion.1.gz
  642. man/man1/gmx-genrestr.1.gz
  643. man/man1/gmx-grompp.1.gz
  644. man/man1/gmx-gyrate.1.gz
  645. man/man1/gmx-h2order.1.gz
  646. man/man1/gmx-hbond.1.gz
  647. man/man1/gmx-helix.1.gz
  648. man/man1/gmx-helixorient.1.gz
  649. man/man1/gmx-help.1.gz
  650. man/man1/gmx-hydorder.1.gz
  651. man/man1/gmx-insert-molecules.1.gz
  652. man/man1/gmx-lie.1.gz
  653. man/man1/gmx-make_edi.1.gz
  654. man/man1/gmx-make_ndx.1.gz
  655. man/man1/gmx-mdmat.1.gz
  656. man/man1/gmx-mdrun.1.gz
  657. man/man1/gmx-mindist.1.gz
  658. man/man1/gmx-mk_angndx.1.gz
  659. man/man1/gmx-msd.1.gz
  660. man/man1/gmx-nmeig.1.gz
  661. man/man1/gmx-nmens.1.gz
  662. man/man1/gmx-nmr.1.gz
  663. man/man1/gmx-nmtraj.1.gz
  664. man/man1/gmx-nonbonded-benchmark.1.gz
  665. man/man1/gmx-order.1.gz
  666. man/man1/gmx-pairdist.1.gz
  667. man/man1/gmx-pdb2gmx.1.gz
  668. man/man1/gmx-pme_error.1.gz
  669. man/man1/gmx-polystat.1.gz
  670. man/man1/gmx-potential.1.gz
  671. man/man1/gmx-principal.1.gz
  672. man/man1/gmx-rama.1.gz
  673. man/man1/gmx-rdf.1.gz
  674. man/man1/gmx-report-methods.1.gz
  675. man/man1/gmx-rms.1.gz
  676. man/man1/gmx-rmsdist.1.gz
  677. man/man1/gmx-rmsf.1.gz
  678. man/man1/gmx-rotacf.1.gz
  679. man/man1/gmx-rotmat.1.gz
  680. man/man1/gmx-saltbr.1.gz
  681. man/man1/gmx-sans.1.gz
  682. man/man1/gmx-sasa.1.gz
  683. man/man1/gmx-saxs.1.gz
  684. man/man1/gmx-select.1.gz
  685. man/man1/gmx-sham.1.gz
  686. man/man1/gmx-sigeps.1.gz
  687. man/man1/gmx-solvate.1.gz
  688. man/man1/gmx-sorient.1.gz
  689. man/man1/gmx-spatial.1.gz
  690. man/man1/gmx-spol.1.gz
  691. man/man1/gmx-tcaf.1.gz
  692. man/man1/gmx-traj.1.gz
  693. man/man1/gmx-trajectory.1.gz
  694. man/man1/gmx-trjcat.1.gz
  695. man/man1/gmx-trjconv.1.gz
  696. man/man1/gmx-trjorder.1.gz
  697. man/man1/gmx-tune_pme.1.gz
  698. man/man1/gmx-vanhove.1.gz
  699. man/man1/gmx-velacc.1.gz
  700. man/man1/gmx-view.1.gz
  701. man/man1/gmx-wham.1.gz
  702. man/man1/gmx-wheel.1.gz
  703. man/man1/gmx-x2top.1.gz
  704. man/man1/gmx-xpm2ps.1.gz
  705. man/man1/gmx.1.gz
  706. @owner
  707. @group
  708. @mode
Collapse this list.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • gromacs>0:science/gromacs
To install the port:
cd /usr/ports/science/gromacs/ && make install clean
To add the package, run one of these commands:
  • pkg install science/gromacs
  • pkg install gromacs
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: gromacs
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1642283496 SHA256 (gromacs-2021.5.tar.gz) = eba63fe6106812f72711ef7f76447b12dd1ee6c81b3d8d4d0e3098cd9ea009b6 SIZE (gromacs-2021.5.tar.gz) = 38023772

Packages (timestamps in pop-ups are UTC):
gromacs
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest2025.0_12025.32020.52025.0_1-n/an/an/a
FreeBSD:13:quarterly2025.0_12025.0_1-2025.0_1-n/an/an/a
FreeBSD:14:latest2025.32025.3-2025.0_1----
FreeBSD:14:quarterly2025.0_12025.0_1-2025.0_1--2023.2_22023.2_2
FreeBSD:15:latest2025.32025.3n/a2025.0_1n/an/a2023.2_22023.2_2
FreeBSD:15:quarterly2025.0_12025.0_1n/a-n/an/a--
FreeBSD:16:latest2025.32025.3n/a-n/an/a--
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. boost-libs>=1.44 : devel/boost-libs
  2. cmake : devel/cmake
  3. gfortran10 : lang/gcc10
  4. pkgconf>=1.3.0_1 : devel/pkgconf
  5. as : devel/binutils
  6. perl5>=5.32.r0<5.33 : lang/perl5.32
  7. ice.pc : x11/libICE
  8. sm.pc : x11/libSM
  9. xext.pc : x11/libXext
  10. x11.pc : x11/libX11
Runtime dependencies:
  1. gfortran10 : lang/gcc10
  2. perl5>=5.32.r0<5.33 : lang/perl5.32
  3. ice.pc : x11/libICE
  4. sm.pc : x11/libSM
  5. xext.pc : x11/libXext
  6. x11.pc : x11/libX11
Library dependencies:
  1. libhwloc.so : devel/hwloc2
  2. libfftw3.so : math/fftw3
  3. libxml2.so : textproc/libxml2
  4. libblas.so : math/blas
  5. liblapack.so : math/lapack
There are no ports dependent upon this port

Configuration Options:
===> The following configuration options are available for gromacs-2021.5_2: ATLAS=off: Use ATLAS for BLAS and LAPACK FLOAT=off: Use single instead of double precision LEGACY=on: Install legacy API OPENCL=off: Heterogeneous computing via OpenCL OPENMP=on: Parallel processing support via OpenMP SIMD=off: Use CPU-specific optimizations X11=on: X11 (graphics) support ====> Multiprocessing: you have to select exactly one of them NOMP=off: No multiprocessing support MPICH=off: Parallel processing support via MPICH 3 OPENMPI=off: Parallel processing support via Open MPI THREAD_MPI=on: Build a thread-MPI-based multithreaded version of GROMACS ===> Use 'make config' to modify these settings
Options name:
science_gromacs
USES:
cmake compiler:c++14-lang fortran gnome perl5 pkgconfig shebangfix xorg blaslapack
FreshPorts was unable to extract/find any pkg message
Master Sites:
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Collapse this list.
  1. ftp://ftp.gromacs.org/pub/gromacs/
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Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2021.5_2
10 Apr 2022 19:47:23
commit hash: 035e778ee53345464c2d7466a3895e17073ad1f6commit hash: 035e778ee53345464c2d7466a3895e17073ad1f6commit hash: 035e778ee53345464c2d7466a3895e17073ad1f6commit hash: 035e778ee53345464c2d7466a3895e17073ad1f6 files touched by this commit
Charlie Li (vishwin) search for other commits by this committer
textproc/libxml2: bump all LIB_DEPENDS consumers

This is a separate and direct commit to quarterly as PORTREVISIONs
may not match from main.

PR: 262853, 262940, 262877
Approved by: fluffy (mentor)

Number of commits found: 1