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Current status

The server has been repaired, with a new power supply, for $23. I am waiting for lower COVID rates before visiting the datacenter to return it.
non port: science/massxpert/pkg-plist
SVNWeb

Number of commits found XX: 8

Sat, 9 Mar 2019
[ 23:23 yuri ] Original commit   Revision:495214
495214 science/massxpert/Makefile
495214 science/massxpert/distinfo
495214 science/massxpert/files/patch-CMakeLists.txt
495214 science/massxpert/files/patch-lib_cleaveSpec.cpp
495214 science/massxpert/files/patch-lib_propListHolder.cpp
495214 science/massxpert/files/patch-plugins-src_seqToolsPlugin_seqToolsPluginDlg.cpp
495214 science/massxpert/pkg-descr
495214 science/massxpert/pkg-plist
science/massxpert: Update 3.4.0 -> 3.6.1

This software seems to be abandoned by its upstream, and rescued by the Debian
team.
I've set its source to Debian's GitLab server, where they source it from now.

Port changes:
* 3.6.1 is Qt5-based: remove the DEPRECATED lines
* USE_GCC seems to be needed due to clang error messages
* MAKE_JOBS_UNSAFE isn't needed
Wed, 12 Nov 2014
[ 18:48 antoine ] Original commit   Revision:372500
372500 science/2d-rewriter/pkg-plist
372500 science/InsightToolkit/pkg-plist
372500 science/afni/Makefile
372500 science/afni/pkg-plist
372500 science/bddsolve/pkg-plist
372500 science/bodr/pkg-plist
372500 science/buddy/pkg-plist
372500 science/cdcl/pkg-plist
372500 science/cdf/Makefile
372500 science/cdf/pkg-plist

(Only the first 10 of 56 ports in this commit are shown above. View all ports for this commit)
Cleanup plist
Mon, 30 Jun 2014
[ 20:39 vg ] Original commit   Revision:359917
359917 science/massxpert/Makefile
359917 science/massxpert/pkg-plist
- Support staging.
Tue, 22 Oct 2013
[ 14:01 amdmi3 ] Original commit   Revision:331274
331274 science/avogadro/pkg-plist
331274 science/gchemutils/pkg-plist
331274 science/gwyddion/pkg-plist
331274 science/kst2/pkg-plist
331274 science/linsmith/pkg-plist
331274 science/massxpert/pkg-plist
331274 security/clamtk/Makefile
331274 security/clamtk/pkg-plist
331274 security/fpm2/pkg-plist
331274 security/fprint_demo/pkg-plist

(Only the first 10 of 83 ports in this commit are shown above. View all ports for this commit)
- Remove manual creation and removal of share/applications, as it's now in the
mtree (categories starting with [st])

Approved by:	portmgr (bdrewery)
Sun, 16 Dec 2012
[ 20:59 pawel ] Original commit   Revision:309044
309044 science/massxpert/Makefile
309044 science/massxpert/distinfo
309044 science/massxpert/pkg-descr
309044 science/massxpert/pkg-plist
- Update to version 3.3.0 [1]
- Add missing deps
- Mark MAKE_JOBS_UNSAFE
- tab -> space in WWW: line

PR:		ports/174397 [1]
Submitted by:	Veniamin Gvozdikov <g.veniamin@googlemail.com> (maintainer)
Thu, 31 Mar 2011
[ 06:51 culot ] Original commit 
1.3 science/massxpert/Makefile
1.2 science/massxpert/distinfo
1.3 science/massxpert/pkg-plist
- Update to 2.4.3
- LICENSE added

PR:             ports/156059
Submitted by:   Gvozdikov Veniamin <g.veniamin AT googlemail.com> (maintainer)
Thu, 27 May 2010
[ 06:07 wen ] Original commit 
1.2 science/massxpert/Makefile
1.1 science/massxpert/files/patch-CMakeLists.txt
1.2 science/massxpert/pkg-plist
- Fix mans
- Remove USE_LDCONFIG

PR:             ports/146795
Submitted by:   Gvozdikov Veniamin <g.veniamin@googlemail.com> (maintainer)
Thu, 20 May 2010
[ 09:43 wen ] Original commit 
1.189 science/Makefile
1.1 science/massxpert/Makefile
1.1 science/massxpert/distinfo
1.1 science/massxpert/pkg-descr
1.1 science/massxpert/pkg-plist
The massXpert project aims at providing (bio)chemists with a software
package allowing the following:

* User-specific atom definitions and polymer chemistry definitions;
* Powerful sequence editing with user-defined glyphs for each monomer
and monomer chemical modification. Multi-region selections;
* Polymer sequence chemical/enzymatic cleavage;
* Intramolecular cross-linking, like disulfide bonds with total resolution
of the peptides generated upon enzymatic cleavage;
* Gas-phase fragmentation of oligomers;
* Mass-to-charge ratio calculations with inline change of ionization agent;
* Calculation of net electrical charge and of isoelectric point (even by
taking into account monomer modifications if polymer is a protein);
* Simulation of isotopic patterns for any chemical formula and z charge;
* A number of plugins allow 1) translation of the sequence from one format
to another (using a dictionary, like between the 1-letter code and the 3-letter
code of proteins) 2) conversion of number format according to any localized
number format 3) sort mass lists.

PR:             ports/146564
Submitted by:   Gvozdikov Veniamin <g.veniamin@googlemail.com>

Number of commits found XX: 8

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