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After the ports freeze to fix some stuff, the freeze is over. I have some work to do before FreshPorts can start processing commits again before it can start processing again. I've created an issue for that.
Port details on branch 2026Q3
minc-tools Basic minc-tools from former minc repository
2.3.00_1 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.3.00_1Version of this port present on the latest quarterly branch.
Deprecated DEPRECATED: Abandoned upstream, does not build with CMake 4
Expiration Date EXPIRATION DATE: 2026-11-30
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2026-09-21 18:03:05
Last Update: 2026-09-21 17:58:49
Commit Hash: fc8b241
Also Listed In: biology
License: MIT
WWW:
https://www.bic.mni.mcgill.ca/ServicesSoftware/MINC
Description:
MINC - Medical Image NetCDF or MINC isn't netCDF. This metaproject bundles multiple MINC-based packages that historically have been developed somewhat independently. Note: previously, this port was science/mint2, but it is now split into two parts: libminc and minc-tools.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
pkg-plist: as obtained via: make generate-plist
Expand this list (92 items)
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  1. @ldconfig
  2. /usr/local/share/licenses/minc-tools-2.3.00_1/catalog.mk
  3. /usr/local/share/licenses/minc-tools-2.3.00_1/LICENSE
  4. /usr/local/share/licenses/minc-tools-2.3.00_1/MIT
  5. bin/dcm2mnc
  6. bin/ecattominc
  7. bin/invert_raw_image
  8. bin/minc_modify_header
  9. bin/mincaverage
  10. bin/mincblob
  11. bin/minccalc
  12. bin/minccmp
  13. bin/mincconcat
  14. bin/mincconvert
  15. bin/minccopy
  16. bin/mincdiff
  17. bin/mincdump
  18. bin/mincedit
  19. bin/mincexpand
  20. bin/mincextract
  21. bin/mincgen
  22. bin/mincheader
  23. bin/minchistory
  24. bin/mincinfo
  25. bin/minclookup
  26. bin/mincmakescalar
  27. bin/mincmakevector
  28. bin/mincmath
  29. bin/mincmorph
  30. bin/mincpik
  31. bin/mincresample
  32. bin/mincreshape
  33. bin/mincsample
  34. bin/mincstats
  35. bin/minctoecat
  36. bin/minctoraw
  37. bin/mincview
  38. bin/mincwindow
  39. bin/mnc2nii
  40. bin/nii2mnc
  41. bin/rawtominc
  42. bin/transformtags
  43. bin/upet2mnc
  44. bin/voxeltoworld
  45. bin/worldtovoxel
  46. bin/xfmconcat
  47. bin/xfminvert
  48. share/man/man1/dcm2mnc.1.gz
  49. share/man/man1/ecattominc.1.gz
  50. share/man/man1/invert_raw_image.1.gz
  51. share/man/man1/minc_modify_header.1.gz
  52. share/man/man1/mincaverage.1.gz
  53. share/man/man1/mincblob.1.gz
  54. share/man/man1/minccalc.1.gz
  55. share/man/man1/minccmp.1.gz
  56. share/man/man1/mincconcat.1.gz
  57. share/man/man1/mincconvert.1.gz
  58. share/man/man1/minccopy.1.gz
  59. share/man/man1/mincdiff.1.gz
  60. share/man/man1/mincdump.1.gz
  61. share/man/man1/mincedit.1.gz
  62. share/man/man1/mincexpand.1.gz
  63. share/man/man1/mincextract.1.gz
  64. share/man/man1/mincgen.1.gz
  65. share/man/man1/mincheader.1.gz
  66. share/man/man1/mincinfo.1.gz
  67. share/man/man1/minclookup.1.gz
  68. share/man/man1/mincmakescalar.1.gz
  69. share/man/man1/mincmakevector.1.gz
  70. share/man/man1/mincmath.1.gz
  71. share/man/man1/mincresample.1.gz
  72. share/man/man1/mincreshape.1.gz
  73. share/man/man1/mincsample.1.gz
  74. share/man/man1/mincstats.1.gz
  75. share/man/man1/minctoecat.1.gz
  76. share/man/man1/minctoraw.1.gz
  77. share/man/man1/mincview.1.gz
  78. share/man/man1/mincwindow.1.gz
  79. share/man/man1/mnc2nii.1.gz
  80. share/man/man1/nii2mnc.1.gz
  81. share/man/man1/rawtominc.1.gz
  82. share/man/man1/transformtags.1.gz
  83. share/man/man1/upet2mnc.1.gz
  84. share/man/man1/vff2mnc.1.gz
  85. share/man/man1/voxeltoworld.1.gz
  86. share/man/man1/xfm2def.1.gz
  87. share/man/man1/xfmconcat.1.gz
  88. share/man/man1/xfmflip.1.gz
  89. share/man/man1/xfminvert.1.gz
  90. @owner
  91. @group
  92. @mode
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USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • minc-tools>0:science/minc-tools
To install the port:
cd /usr/ports/science/minc-tools/ && make install clean
To add the package, run one of these commands:
  • pkg install science/minc-tools
  • pkg install minc-tools
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: minc-tools
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1782294411 SHA256 (minc-tools-2-3-00.tar.gz) = b505e9666706ac2e7f58febb1e5fcda24fc858b0dc7625d433d409cff33e85b4 SIZE (minc-tools-2-3-00.tar.gz) = 3002667

No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. nifticlib>0 : science/nifticlib
  2. bison : devel/bison
  3. cmake : devel/cmake-core
  4. ninja : devel/ninja
  5. perl5>=5.42.r<5.43 : lang/perl5.42
Runtime dependencies:
  1. bash : shells/bash
  2. perl5>=5.42.r<5.43 : lang/perl5.42
Library dependencies:
  1. libhdf5.so : science/hdf5
  2. libnetcdf.so : science/netcdf
  3. libminc2.so : science/libminc
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
science_minc-tools
USES:
bison cmake localbase perl5 shebangfix
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://github.com/BIC-MNI/minc-tools/archive/refs/tags/
Collapse this list.

Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.3.00_1
21 Sep 2026 17:58:49
commit hash: fc8b24128aa6a44ba1c93a3ce63b0bee2813fac6commit hash: fc8b24128aa6a44ba1c93a3ce63b0bee2813fac6commit hash: fc8b24128aa6a44ba1c93a3ce63b0bee2813fac6commit hash: fc8b24128aa6a44ba1c93a3ce63b0bee2813fac6 files touched by this commit
Gleb Popov (arrowd) search for other commits by this committer
science/minc-tools: Mark deprecated

(cherry picked from commit 94f756854a95596a214b950720cbf35803e1ce19)

Number of commits found: 1