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Port details
plumed PLUgin for MolEcular Dynamics
2.6.0 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2020-05-04 19:56:15
Last Update: 2020-05-23 22:59:28
SVN Revision: 536357
Also Listed In: graphics
License: LGPL3
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (495 items)
  1. @ldconfig
  2. /usr/local/share/licenses/plumed-2.6.0/catalog.mk
  3. /usr/local/share/licenses/plumed-2.6.0/LICENSE
  4. /usr/local/share/licenses/plumed-2.6.0/LGPL3
  5. bin/plumed
  6. bin/plumed-config
  7. bin/plumed-patch
  8. include/plumed/analysis/AnalysisBase.h
  9. include/plumed/analysis/AverageVessel.h
  10. include/plumed/analysis/DataCollectionObject.h
  11. include/plumed/analysis/LandmarkSelectionBase.h
  12. include/plumed/analysis/ReadAnalysisFrames.h
  13. include/plumed/asmjit/arch.h
  14. include/plumed/asmjit/arm.h
  15. include/plumed/asmjit/asmjit.h
  16. include/plumed/asmjit/asmjit_apibegin.h
  17. include/plumed/asmjit/asmjit_apiend.h
  18. include/plumed/asmjit/asmjit_build.h
  19. include/plumed/asmjit/assembler.h
  20. include/plumed/asmjit/base.h
  21. include/plumed/asmjit/codebuilder.h
  22. include/plumed/asmjit/codecompiler.h
  23. include/plumed/asmjit/codeemitter.h
  24. include/plumed/asmjit/codeholder.h
  25. include/plumed/asmjit/constpool.h
  26. include/plumed/asmjit/cpuinfo.h
  27. include/plumed/asmjit/func.h
  28. include/plumed/asmjit/globals.h
  29. include/plumed/asmjit/inst.h
  30. include/plumed/asmjit/logging.h
  31. include/plumed/asmjit/misc_p.h
  32. include/plumed/asmjit/moved_string.h
  33. include/plumed/asmjit/operand.h
  34. include/plumed/asmjit/osutils.h
  35. include/plumed/asmjit/regalloc_p.h
  36. include/plumed/asmjit/runtime.h
  37. include/plumed/asmjit/simdtypes.h
  38. include/plumed/asmjit/utils.h
  39. include/plumed/asmjit/vmem.h
  40. include/plumed/asmjit/x86.h
  41. include/plumed/asmjit/x86assembler.h
  42. include/plumed/asmjit/x86builder.h
  43. include/plumed/asmjit/x86compiler.h
  44. include/plumed/asmjit/x86emitter.h
  45. include/plumed/asmjit/x86globals.h
  46. include/plumed/asmjit/x86inst.h
  47. include/plumed/asmjit/x86instimpl_p.h
  48. include/plumed/asmjit/x86internal_p.h
  49. include/plumed/asmjit/x86logging_p.h
  50. include/plumed/asmjit/x86misc.h
  51. include/plumed/asmjit/x86operand.h
  52. include/plumed/asmjit/x86regalloc_p.h
  53. include/plumed/asmjit/zone.h
  54. include/plumed/bias/ActionRegister.h
  55. include/plumed/bias/Bias.h
  56. include/plumed/bias/ReweightBase.h
  57. include/plumed/blas/blas.h
  58. include/plumed/blas/def_external.h
  59. include/plumed/blas/def_internal.h
  60. include/plumed/blas/real.h
  61. include/plumed/cltools/CLTool.h
  62. include/plumed/cltools/CLToolRegister.h
  63. include/plumed/colvar/ActionRegister.h
  64. include/plumed/colvar/Colvar.h
  65. include/plumed/colvar/CoordinationBase.h
  66. include/plumed/colvar/PathMSDBase.h
  67. include/plumed/config/Config.h
  68. include/plumed/config/version.h
  69. include/plumed/core/Action.h
  70. include/plumed/core/ActionAnyorder.h
  71. include/plumed/core/ActionAtomistic.h
  72. include/plumed/core/ActionPilot.h
  73. include/plumed/core/ActionRegister.h
  74. include/plumed/core/ActionSet.h
  75. include/plumed/core/ActionSetup.h
  76. include/plumed/core/ActionShortcut.h
  77. include/plumed/core/ActionWithArguments.h
  78. include/plumed/core/ActionWithValue.h
  79. include/plumed/core/ActionWithVirtualAtom.h
  80. include/plumed/core/Atoms.h
  81. include/plumed/core/CLTool.h
  82. include/plumed/core/CLToolMain.h
  83. include/plumed/core/CLToolRegister.h
  84. include/plumed/core/Colvar.h
  85. include/plumed/core/DataFetchingObject.h
  86. include/plumed/core/ExchangePatterns.h
  87. include/plumed/core/FlexibleBin.h
  88. include/plumed/core/GREX.h
  89. include/plumed/core/MDAtoms.h
  90. include/plumed/core/PlumedMain.h
  91. include/plumed/core/PlumedMainInitializer.h
  92. include/plumed/core/SetupMolInfo.h
  93. include/plumed/core/TargetDist.h
  94. include/plumed/core/Value.h
  95. include/plumed/core/WithCmd.h
  96. include/plumed/function/ActionRegister.h
  97. include/plumed/function/Function.h
  98. include/plumed/gridtools/ActionWithGrid.h
  99. include/plumed/gridtools/ActionWithInputGrid.h
  100. include/plumed/gridtools/ActionWithIntegral.h
  101. include/plumed/gridtools/AverageOnGrid.h
  102. include/plumed/gridtools/ContourFindingBase.h
  103. include/plumed/gridtools/GridPrintingBase.h
  104. include/plumed/gridtools/GridSearch.h
  105. include/plumed/gridtools/GridVessel.h
  106. include/plumed/gridtools/HistogramOnGrid.h
  107. include/plumed/isdb/MetainferenceBase.h
  108. include/plumed/lapack/def_external.h
  109. include/plumed/lapack/def_internal.h
  110. include/plumed/lapack/lapack.h
  111. include/plumed/lapack/lapack_limits.h
  112. include/plumed/lapack/real.h
  113. include/plumed/lepton/CompiledExpression.h
  114. include/plumed/lepton/CustomFunction.h
  115. include/plumed/lepton/Exception.h
  116. include/plumed/lepton/ExpressionProgram.h
  117. include/plumed/lepton/ExpressionTreeNode.h
  118. include/plumed/lepton/Lepton.h
  119. include/plumed/lepton/MSVC_erfc.h
  120. include/plumed/lepton/Operation.h
  121. include/plumed/lepton/ParsedExpression.h
  122. include/plumed/lepton/Parser.h
  123. include/plumed/lepton/windowsIncludes.h
  124. include/plumed/mapping/Mapping.h
  125. include/plumed/mapping/PathBase.h
  126. include/plumed/mapping/PathReparameterization.h
  127. include/plumed/mapping/TrigonometricPathVessel.h
  128. include/plumed/molfile/Gromacs.h
  129. include/plumed/molfile/endianswap.h
  130. include/plumed/molfile/fastio.h
  131. include/plumed/molfile/largefiles.h
  132. include/plumed/molfile/libmolfile_plugin.h
  133. include/plumed/molfile/molfile_plugin.h
  134. include/plumed/molfile/periodic_table.h
  135. include/plumed/molfile/readpdb.h
  136. include/plumed/molfile/vmdplugin.h
  137. include/plumed/multicolvar/ActionVolume.h
  138. include/plumed/multicolvar/AtomValuePack.h
  139. include/plumed/multicolvar/BridgedMultiColvarFunction.h
  140. include/plumed/multicolvar/CatomPack.h
  141. include/plumed/multicolvar/MultiColvarBase.h
  142. include/plumed/multicolvar/MultiColvarFilter.h
  143. include/plumed/multicolvar/VolumeGradientBase.h
  144. include/plumed/reference/ArgumentOnlyDistance.h
  145. include/plumed/reference/DRMSD.h
  146. include/plumed/reference/Direction.h
  147. include/plumed/reference/FakeFrame.h
  148. include/plumed/reference/MetricRegister.h
  149. include/plumed/reference/MultiDomainRMSD.h
  150. include/plumed/reference/RMSDBase.h
  151. include/plumed/reference/ReferenceArguments.h
  152. include/plumed/reference/ReferenceAtoms.h
  153. include/plumed/reference/ReferenceConfiguration.h
  154. include/plumed/reference/ReferenceValuePack.h
  155. include/plumed/reference/SingleDomainRMSD.h
  156. include/plumed/secondarystructure/SecondaryStructureRMSD.h
  157. include/plumed/setup/ActionSetup.h
  158. include/plumed/tools/Angle.h
  159. include/plumed/tools/AtomNumber.h
  160. include/plumed/tools/BiasRepresentation.h
  161. include/plumed/tools/Brent1DRootSearch.h
  162. include/plumed/tools/Citations.h
  163. include/plumed/tools/Communicator.h
  164. include/plumed/tools/ConjugateGradient.h
  165. include/plumed/tools/DLLoader.h
  166. include/plumed/tools/DynamicList.h
  167. include/plumed/tools/ERMSD.h
  168. include/plumed/tools/Exception.h
  169. include/plumed/tools/File.h
  170. include/plumed/tools/FileBase.h
  171. include/plumed/tools/ForwardDecl.h
  172. include/plumed/tools/Grid.h
  173. include/plumed/tools/HistogramBead.h
  174. include/plumed/tools/IFile.h
  175. include/plumed/tools/KernelFunctions.h
  176. include/plumed/tools/Keywords.h
  177. include/plumed/tools/LatticeReduction.h
  178. include/plumed/tools/LinkCells.h
  179. include/plumed/tools/Log.h
  180. include/plumed/tools/LoopUnroller.h
  181. include/plumed/tools/Matrix.h
  182. include/plumed/tools/MatrixSquareBracketsAccess.h
  183. include/plumed/tools/Minimise1DBrent.h
  184. include/plumed/tools/MinimiseBase.h
  185. include/plumed/tools/MolDataClass.h
  186. include/plumed/tools/MultiValue.h
  187. include/plumed/tools/NeighborList.h
  188. include/plumed/tools/OFile.h
  189. include/plumed/tools/OpenMP.h
  190. include/plumed/tools/PDB.h
  191. include/plumed/tools/Pbc.h
  192. include/plumed/tools/PlumedHandle.h
  193. include/plumed/tools/RMSD.h
  194. include/plumed/tools/Random.h
  195. include/plumed/tools/RootFindingBase.h
  196. include/plumed/tools/Stopwatch.h
  197. include/plumed/tools/Subprocess.h
  198. include/plumed/tools/SwitchingFunction.h
  199. include/plumed/tools/Tensor.h
  200. include/plumed/tools/Tools.h
  201. include/plumed/tools/Torsion.h
  202. include/plumed/tools/Units.h
  203. include/plumed/tools/Vector.h
  204. include/plumed/tools/h36.h
  205. include/plumed/vatom/ActionRegister.h
  206. include/plumed/vatom/ActionWithVirtualAtom.h
  207. include/plumed/vesselbase/ActionWithAveraging.h
  208. include/plumed/vesselbase/ActionWithInputVessel.h
  209. include/plumed/vesselbase/ActionWithVessel.h
  210. include/plumed/vesselbase/AveragingVessel.h
  211. include/plumed/vesselbase/Between.h
  212. include/plumed/vesselbase/BridgeVessel.h
  213. include/plumed/vesselbase/FunctionVessel.h
  214. include/plumed/vesselbase/LessThan.h
  215. include/plumed/vesselbase/OrderingVessel.h
  216. include/plumed/vesselbase/ShortcutVessel.h
  217. include/plumed/vesselbase/StoreDataVessel.h
  218. include/plumed/vesselbase/ValueVessel.h
  219. include/plumed/vesselbase/Vessel.h
  220. include/plumed/vesselbase/VesselRegister.h
  221. include/plumed/wrapper/Plumed.h
  222. lib/libplumed.a
  223. lib/libplumed.so
  224. lib/libplumedKernel.so
  225. lib/libplumedWrapper.a
  226. lib/plumed/modulefile
  227. lib/plumed/patches/amber18.config
  228. lib/plumed/patches/amber18.diff
  229. lib/plumed/patches/gromacs-2018.8.config
  230. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/CMakeLists.txt
  231. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/CMakeLists.txt.preplumed
  232. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/mdlib/force.cpp
  233. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/mdlib/force.cpp.preplumed
  234. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/mdlib/minimize.cpp
  235. lib/plumed/patches/gromacs-2018.8.diff/src/gromacs/mdlib/minimize.cpp.preplumed
  236. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/md.cpp
  237. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/md.cpp.preplumed
  238. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/mdrun.cpp
  239. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/mdrun.cpp.preplumed
  240. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/repl_ex.cpp
  241. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/repl_ex.cpp.preplumed
  242. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/repl_ex.h
  243. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/repl_ex.h.preplumed
  244. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/runner.cpp
  245. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/runner.cpp.preplumed
  246. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/runner.h
  247. lib/plumed/patches/gromacs-2018.8.diff/src/programs/mdrun/runner.h.preplumed
  248. lib/plumed/patches/gromacs-2019.4.config
  249. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/CMakeLists.txt
  250. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/CMakeLists.txt.preplumed
  251. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdlib/force.cpp
  252. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdlib/force.cpp.preplumed
  253. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/legacymdrunoptions.cpp
  254. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/legacymdrunoptions.cpp.preplumed
  255. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/legacymdrunoptions.h
  256. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/legacymdrunoptions.h.preplumed
  257. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/md.cpp
  258. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/md.cpp.preplumed
  259. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/minimize.cpp
  260. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/minimize.cpp.preplumed
  261. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/replicaexchange.cpp
  262. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/replicaexchange.cpp.preplumed
  263. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/replicaexchange.h
  264. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/replicaexchange.h.preplumed
  265. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/runner.cpp
  266. lib/plumed/patches/gromacs-2019.4.diff/src/gromacs/mdrun/runner.cpp.preplumed
  267. lib/plumed/patches/gromacs-4.5.7.config
  268. lib/plumed/patches/gromacs-4.5.7.diff
  269. lib/plumed/patches/namd-2.12.config
  270. lib/plumed/patches/namd-2.12.diff
  271. lib/plumed/patches/namd-2.13.config
  272. lib/plumed/patches/namd-2.13.diff
  273. lib/plumed/patches/patch.sh
  274. lib/plumed/patches/qespresso-5.0.2.config
  275. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/forces.f90
  276. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/forces.f90.preplumed
  277. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_forces.f90
  278. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_forces.f90.preplumed
  279. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_initialization.f90
  280. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/plugin_initialization.f90.preplumed
  281. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/pwscf.f90
  282. lib/plumed/patches/qespresso-5.0.2.diff/PW/src/pwscf.f90.preplumed
  283. lib/plumed/patches/qespresso-6.2.config
  284. lib/plumed/patches/qespresso-6.2.diff/PW/src/forces.f90
  285. lib/plumed/patches/qespresso-6.2.diff/PW/src/forces.f90.preplumed
  286. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_ext_forces.f90
  287. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_ext_forces.f90.preplumed
  288. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_initialization.f90
  289. lib/plumed/patches/qespresso-6.2.diff/PW/src/plugin_initialization.f90.preplumed
  290. lib/plumed/patches/qespresso-6.2.diff/PW/src/run_pwscf.f90
  291. lib/plumed/patches/qespresso-6.2.diff/PW/src/run_pwscf.f90.preplumed
  292. lib/plumed/plumed-config
  293. lib/plumed/plumed-mklib
  294. lib/plumed/plumed-newcv
  295. lib/plumed/plumed-partial_tempering
  296. lib/plumed/plumed-patch
  297. lib/plumed/plumed-runtime
  298. lib/plumed/plumed-selector
  299. lib/plumed/plumed-vim2html
  300. lib/plumed/scripts/config.sh
  301. lib/plumed/scripts/mklib.sh
  302. lib/plumed/scripts/newcv.sh
  303. lib/plumed/scripts/partial_tempering.sh
  304. lib/plumed/scripts/patch.sh
  305. lib/plumed/scripts/selector.sh
  306. lib/plumed/scripts/vim2html.sh
  307. lib/plumed/src/colvar/Template.cpp
  308. lib/plumed/src/config/compile_options.sh
  309. lib/plumed/src/config/config.txt
  310. lib/plumed/src/lib/Plumed.cmake
  311. lib/plumed/src/lib/Plumed.cmake.runtime
  312. lib/plumed/src/lib/Plumed.cmake.shared
  313. lib/plumed/src/lib/Plumed.cmake.static
  314. lib/plumed/src/lib/Plumed.inc
  315. lib/plumed/src/lib/Plumed.inc.runtime
  316. lib/plumed/src/lib/Plumed.inc.shared
  317. lib/plumed/src/lib/Plumed.inc.static
  318. lib/plumed/vim/help/ABMD.txt
  319. lib/plumed/vim/help/ADAPTIVE_PATH.txt
  320. lib/plumed/vim/help/ALPHABETA.txt
  321. lib/plumed/vim/help/ALPHARMSD.txt
  322. lib/plumed/vim/help/ANGLE.txt
  323. lib/plumed/vim/help/ANGLES.txt
  324. lib/plumed/vim/help/ANTIBETARMSD.txt
  325. lib/plumed/vim/help/AROUND.txt
  326. lib/plumed/vim/help/AVERAGE.txt
  327. lib/plumed/vim/help/BIASVALUE.txt
  328. lib/plumed/vim/help/BRIDGE.txt
  329. lib/plumed/vim/help/CALIBER.txt
  330. lib/plumed/vim/help/CAVITY.txt
  331. lib/plumed/vim/help/CELL.txt
  332. lib/plumed/vim/help/CENTER.txt
  333. lib/plumed/vim/help/CENTER_OF_MULTICOLVAR.txt
  334. lib/plumed/vim/help/COLLECT_FRAMES.txt
  335. lib/plumed/vim/help/COM.txt
  336. lib/plumed/vim/help/COMBINE.txt
  337. lib/plumed/vim/help/COMMITTOR.txt
  338. lib/plumed/vim/help/CONSTANT.txt
  339. lib/plumed/vim/help/CONTACTMAP.txt
  340. lib/plumed/vim/help/CONVERT_TO_FES.txt
  341. lib/plumed/vim/help/COORDINATION.txt
  342. lib/plumed/vim/help/COORDINATIONNUMBER.txt
  343. lib/plumed/vim/help/CS2BACKBONE.txt
  344. lib/plumed/vim/help/CUSTOM.txt
  345. lib/plumed/vim/help/DEBUG.txt
  346. lib/plumed/vim/help/DENSITY.txt
  347. lib/plumed/vim/help/DHENERGY.txt
  348. lib/plumed/vim/help/DIHCOR.txt
  349. lib/plumed/vim/help/DIMER.txt
  350. lib/plumed/vim/help/DIPOLE.txt
  351. lib/plumed/vim/help/DISTANCE.txt
  352. lib/plumed/vim/help/DISTANCES.txt
  353. lib/plumed/vim/help/DISTANCE_FROM_CONTOUR.txt
  354. lib/plumed/vim/help/DRMSD.txt
  355. lib/plumed/vim/help/DUMPATOMS.txt
  356. lib/plumed/vim/help/DUMPCUBE.txt
  357. lib/plumed/vim/help/DUMPDERIVATIVES.txt
  358. lib/plumed/vim/help/DUMPFORCES.txt
  359. lib/plumed/vim/help/DUMPGRID.txt
  360. lib/plumed/vim/help/DUMPMASSCHARGE.txt
  361. lib/plumed/vim/help/DUMPMULTICOLVAR.txt
  362. lib/plumed/vim/help/DUMPPROJECTIONS.txt
  363. lib/plumed/vim/help/EEFSOLV.txt
  364. lib/plumed/vim/help/EFFECTIVE_ENERGY_DRIFT.txt
  365. lib/plumed/vim/help/EMMI.txt
  366. lib/plumed/vim/help/ENDPLUMED.txt
  367. lib/plumed/vim/help/ENERGY.txt
  368. lib/plumed/vim/help/ENSEMBLE.txt
  369. lib/plumed/vim/help/ERMSD.txt
  370. lib/plumed/vim/help/EUCLIDEAN_DISSIMILARITIES.txt
  371. lib/plumed/vim/help/EXTENDED_LAGRANGIAN.txt
  372. lib/plumed/vim/help/EXTERNAL.txt
  373. lib/plumed/vim/help/EXTRACV.txt
  374. lib/plumed/vim/help/FAKE.txt
  375. lib/plumed/vim/help/FIND_CONTOUR.txt
  376. lib/plumed/vim/help/FIND_CONTOUR_SURFACE.txt
  377. lib/plumed/vim/help/FIND_SPHERICAL_CONTOUR.txt
  378. lib/plumed/vim/help/FIT_TO_TEMPLATE.txt
  379. lib/plumed/vim/help/FIXEDATOM.txt
  380. lib/plumed/vim/help/FLUSH.txt
  381. lib/plumed/vim/help/FOURIER_TRANSFORM.txt
  382. lib/plumed/vim/help/FRET.txt
  383. lib/plumed/vim/help/FUNCPATHMSD.txt
  384. lib/plumed/vim/help/FUNCSUMHILLS.txt
  385. lib/plumed/vim/help/GHOST.txt
  386. lib/plumed/vim/help/GPROPERTYMAP.txt
  387. lib/plumed/vim/help/GRID_TO_XYZ.txt
  388. lib/plumed/vim/help/GROUP.txt
  389. lib/plumed/vim/help/GYRATION.txt
  390. lib/plumed/vim/help/HISTOGRAM.txt
  391. lib/plumed/vim/help/INCLUDE.txt
  392. lib/plumed/vim/help/INCYLINDER.txt
  393. lib/plumed/vim/help/INENVELOPE.txt
  394. lib/plumed/vim/help/INPLANEDISTANCES.txt
  395. lib/plumed/vim/help/INSPHERE.txt
  396. lib/plumed/vim/help/INTEGRATE_GRID.txt
  397. lib/plumed/vim/help/INTERPOLATE_GRID.txt
  398. lib/plumed/vim/help/JCOUPLING.txt
  399. lib/plumed/vim/help/LANDMARK_SELECT_FPS.txt
  400. lib/plumed/vim/help/LANDMARK_SELECT_RANDOM.txt
  401. lib/plumed/vim/help/LANDMARK_SELECT_STAGED.txt
  402. lib/plumed/vim/help/LANDMARK_SELECT_STRIDE.txt
  403. lib/plumed/vim/help/LOAD.txt
  404. lib/plumed/vim/help/LOCALENSEMBLE.txt
  405. lib/plumed/vim/help/LOCAL_AVERAGE.txt
  406. lib/plumed/vim/help/LOWER_WALLS.txt
  407. lib/plumed/vim/help/MATHEVAL.txt
  408. lib/plumed/vim/help/MAXENT.txt
  409. lib/plumed/vim/help/MCOLV_COMBINE.txt
  410. lib/plumed/vim/help/MCOLV_PRODUCT.txt
  411. lib/plumed/vim/help/METAD.txt
  412. lib/plumed/vim/help/METAINFERENCE.txt
  413. lib/plumed/vim/help/MFILTER_BETWEEN.txt
  414. lib/plumed/vim/help/MFILTER_LESS.txt
  415. lib/plumed/vim/help/MFILTER_MORE.txt
  416. lib/plumed/vim/help/MOLINFO.txt
  417. lib/plumed/vim/help/MOVINGRESTRAINT.txt
  418. lib/plumed/vim/help/MTRANSFORM_BETWEEN.txt
  419. lib/plumed/vim/help/MTRANSFORM_LESS.txt
  420. lib/plumed/vim/help/MTRANSFORM_MORE.txt
  421. lib/plumed/vim/help/MULTICOLVARDENS.txt
  422. lib/plumed/vim/help/MULTI_RMSD.txt
  423. lib/plumed/vim/help/NLINKS.txt
  424. lib/plumed/vim/help/NOE.txt
  425. lib/plumed/vim/help/OUTPUT_ANALYSIS_DATA_TO_COLVAR.txt
  426. lib/plumed/vim/help/OUTPUT_ANALYSIS_DATA_TO_PDB.txt
  427. lib/plumed/vim/help/PARABETARMSD.txt
  428. lib/plumed/vim/help/PATH.txt
  429. lib/plumed/vim/help/PATHMSD.txt
  430. lib/plumed/vim/help/PBMETAD.txt
  431. lib/plumed/vim/help/PCARMSD.txt
  432. lib/plumed/vim/help/PCAVARS.txt
  433. lib/plumed/vim/help/PCS.txt
  434. lib/plumed/vim/help/PIECEWISE.txt
  435. lib/plumed/vim/help/PLUMED.txt
  436. lib/plumed/vim/help/POSITION.txt
  437. lib/plumed/vim/help/PRE.txt
  438. lib/plumed/vim/help/PRINT.txt
  439. lib/plumed/vim/help/PRINT_DISSIMILARITY_MATRIX.txt
  440. lib/plumed/vim/help/PROPERTYMAP.txt
  441. lib/plumed/vim/help/PUCKERING.txt
  442. lib/plumed/vim/help/RANDOM_EXCHANGES.txt
  443. lib/plumed/vim/help/RDC.txt
  444. lib/plumed/vim/help/READ.txt
  445. lib/plumed/vim/help/READ_DISSIMILARITY_MATRIX.txt
  446. lib/plumed/vim/help/RESCALE.txt
  447. lib/plumed/vim/help/RESELECT_LANDMARKS.txt
  448. lib/plumed/vim/help/RESET_CELL.txt
  449. lib/plumed/vim/help/RESTART.txt
  450. lib/plumed/vim/help/RESTRAINT.txt
  451. lib/plumed/vim/help/REWEIGHT_BIAS.txt
  452. lib/plumed/vim/help/REWEIGHT_METAD.txt
  453. lib/plumed/vim/help/REWEIGHT_TEMP_PRESS.txt
  454. lib/plumed/vim/help/REWEIGHT_WHAM.txt
  455. lib/plumed/vim/help/RMSD.txt
  456. lib/plumed/vim/help/SAXS.txt
  457. lib/plumed/vim/help/SELECT.txt
  458. lib/plumed/vim/help/SELECTOR.txt
  459. lib/plumed/vim/help/SORT.txt
  460. lib/plumed/vim/help/STATS.txt
  461. lib/plumed/vim/help/TARGET.txt
  462. lib/plumed/vim/help/TEMPLATE.txt
  463. lib/plumed/vim/help/TETRAHEDRALPORE.txt
  464. lib/plumed/vim/help/TIME.txt
  465. lib/plumed/vim/help/TORSION.txt
  466. lib/plumed/vim/help/TORSIONS.txt
  467. lib/plumed/vim/help/UNITS.txt
  468. lib/plumed/vim/help/UPDATE_IF.txt
  469. lib/plumed/vim/help/UPPER_WALLS.txt
  470. lib/plumed/vim/help/VOLUME.txt
  471. lib/plumed/vim/help/WHAM_HISTOGRAM.txt
  472. lib/plumed/vim/help/WHAM_WEIGHTS.txt
  473. lib/plumed/vim/help/WHOLEMOLECULES.txt
  474. lib/plumed/vim/help/WRAPAROUND.txt
  475. lib/plumed/vim/help/XANGLES.txt
  476. lib/plumed/vim/help/XDISTANCES.txt
  477. lib/plumed/vim/help/XYDISTANCES.txt
  478. lib/plumed/vim/help/XYTORSIONS.txt
  479. lib/plumed/vim/help/XZDISTANCES.txt
  480. lib/plumed/vim/help/XZTORSIONS.txt
  481. lib/plumed/vim/help/YANGLES.txt
  482. lib/plumed/vim/help/YDISTANCES.txt
  483. lib/plumed/vim/help/YXTORSIONS.txt
  484. lib/plumed/vim/help/YZDISTANCES.txt
  485. lib/plumed/vim/help/YZTORSIONS.txt
  486. lib/plumed/vim/help/ZANGLES.txt
  487. lib/plumed/vim/help/ZDISTANCES.txt
  488. lib/plumed/vim/help/ZXTORSIONS.txt
  489. lib/plumed/vim/help/ZYTORSIONS.txt
  490. lib/plumed/vim/scripts.vim
  491. lib/plumed/vim/syntax/plumed.vim
  492. lib/plumed/vim/syntax/plumedf.vim
  493. libdata/pkgconfig/plumed.pc
  494. libdata/pkgconfig/plumedInternals.pc
  495. libdata/pkgconfig/plumedWrapper.pc
Collapse this list.
Dependency lines:
  • plumed>0:science/plumed
To install the port: cd /usr/ports/science/plumed/ && make install clean
To add the package: pkg install plumed
PKGNAME: plumed
Flavors: there is no flavor information for this port.
distinfo:
Packages:
plumed
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd642.6.0-
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd642.6.0-
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd642.6.0-
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips642.6.0-
FreeBSD:13:powerpc642.6.0-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. bash : shells/bash
  2. xxd : editors/vim-console
  3. gmake>=4.3 : devel/gmake
  4. pkgconf>=1.3.0_1 : devel/pkgconf
  5. autoconf>=2.69 : devel/autoconf
  6. automake>=1.16.1 : devel/automake
Runtime dependencies:
  1. bash : shells/bash
This port is required by:
for Libraries
  1. science/lammps

Configuration Options

USES:

Master Sites:
  1. https://codeload.github.com/plumed/plumed2/tar.gz/v2.6.0?dummy=/

Number of commits found: 3

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
23 May 2020 21:59:28
Original commit files touched by this commit  2.6.0
Revision:536357
yuri search for other commits by this committer
science/plumed: Broken on i386

Reported by:	fallout
06 May 2020 12:00:53
Original commit files touched by this commit  2.6.0
Revision:534167
linimon search for other commits by this committer
Add compiler:c++11-lang to USES to fix build on GCC-based systems:

  core/../../core/tools/../../tools/Vector.h:27:17: error: array: No such file
or directory
04 May 2020 19:55:51
Original commit files touched by this commit  2.6.0
Revision:533981
yuri search for other commits by this committer
New port: science/plumed: PLUgin for MolEcular Dynamics

Number of commits found: 3

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