| Port details on branch 2022Q2 |
- py-pymol OpenGL-based molecular visualization system
- 2.4.0_6 science
 =0      2.4.0_6Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2022-04-24 04:16:20
- Last Update: 2022-04-10 19:47:23
- Commit Hash: 035e778
- Also Listed In: biology python
- License: PyMOL
- WWW:
- https://pymol.org/2/
- Description:
- PyMOL is a Python-enhanced molecular graphics tool. It excels at
3D visualization of proteins, small molecules, density, surfaces,
and trajectories. It also includes molecular editing, ray tracing,
and movies. Open Source PyMOL is free to everyone!
This version represents the community-supported open source distribution
of the closed source commercial product PyMOL.
WWW: https://pymol.org/2/
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}pymol>0:science/py-pymol@${PY_FLAVOR}
- Conflicts:
- CONFLICTS_INSTALL:
- To install the port:
- cd /usr/ports/science/py-pymol/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-pymol
- pkg install py38-pymol
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py38-pymol listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py38-pymol
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1590042797
SHA256 (schrodinger-pymol-open-source-v2.4.0_GH0.tar.gz) = 5ede4ce2e8f53713c5ee64f5905b2d29bf01e4391da7e536ce8909d6b9116581
SIZE (schrodinger-pymol-open-source-v2.4.0_GH0.tar.gz) = 10552539
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py38-numpy>=1.16,1<1.21,1 : math/py-numpy@py38
- glm.hpp : math/glm
- mmtf.hpp : science/mmtf-cpp
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- xorgproto>=0 : x11/xorgproto
- xorgproto>=0 : x11/xorgproto
- Runtime dependencies:
-
- py38-msgpack>0 : devel/py-msgpack@py38
- py38-Pmw>0 : x11-toolkits/py-Pmw@py38
- py38-numpy>=1.16,1<1.21,1 : math/py-numpy@py38
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- py38-qt5-pyqt>=5.15.6 : devel/py-qt5-pyqt@py38
- Library dependencies:
-
- libfreetype.so : print/freetype2
- libpng.so : graphics/png
- libmsgpackc.so : devel/msgpack
- libnetcdf.so : science/netcdf
- libGL.so : graphics/libglvnd
- libGLEW.so : graphics/glew
- libGLU.so : graphics/libGLU
- libglut.so : graphics/freeglut
- libxml2.so : textproc/libxml2
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for py38-pymol-2.4.0_6:
====> GUI (Graphical User Interface) support: you have to select exactly one of them
QT5=on: Qt 5 toolkit support
TK=off: Tk GUI toolkit support
===> Use 'make config' to modify these settings
- Options name:
- science_py-pymol
- USES:
- compiler:c++11-lang gl gnome python:3.5+ shebangfix tar:bz2 pyqt:5
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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