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Current status

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Port details
bioparser C++ header-only parsing library for several formats in bioinformatics
3.0.12.2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.0.12.2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2021-01-19 07:56:57
Last Update: 2021-04-07 08:09:01
Commit Hash: cf118cc
Also Listed In: devel
License: MIT
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (15 items)
Collapse this list.
  1. /usr/local/share/licenses/bioparser-3.0.12.2/catalog.mk
  2. /usr/local/share/licenses/bioparser-3.0.12.2/LICENSE
  3. /usr/local/share/licenses/bioparser-3.0.12.2/MIT
  4. include/bioparser/fasta_parser.hpp
  5. include/bioparser/fastq_parser.hpp
  6. include/bioparser/mhap_parser.hpp
  7. include/bioparser/paf_parser.hpp
  8. include/bioparser/parser.hpp
  9. include/bioparser/sam_parser.hpp
  10. lib/cmake/bioparser/bioparserConfig.cmake
  11. lib/cmake/bioparser/bioparserConfigVersion.cmake
  12. lib/cmake/bioparser/bioparserTargets.cmake
  13. @owner
  14. @group
  15. @mode
Collapse this list.
Dependency lines:
  • bioparser>0:biology/bioparser
To install the port: cd /usr/ports/biology/bioparser/ && make install clean
To add the package: pkg install bioparser
PKGNAME: bioparser
Flavors: there is no flavor information for this port.
distinfo:
Packages: (move your mouse over the cells for more information)
bioparser
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd643.0.12.23.0.12.2
FreeBSD:11:armv6--
FreeBSD:11:i3863.0.12.23.0.12.2
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-3.0.12.2
FreeBSD:12:amd643.0.12.23.0.12.2
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3863.0.12.23.0.12.2
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64-3.0.12.2
FreeBSD:13:aarch643.0.123.0.12.2
FreeBSD:13:amd643.0.12.23.0.12.2
FreeBSD:13:armv63.0.123.0.12.2
FreeBSD:13:armv73.0.123.0.12.2
FreeBSD:13:i3863.0.12.23.0.12.2
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-3.0.12.2
FreeBSD:14:aarch643.0.12.2-
FreeBSD:14:amd643.0.12.2-
FreeBSD:14:armv63.0.12.2-
FreeBSD:14:armv73.0.12.2-
FreeBSD:14:i3863.0.12.2-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc643.0.12.2-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. cmake : devel/cmake
  2. ninja : devel/ninja
This port is required by:
for Build
  1. biology/rampler
  2. biology/spoa

Configuration Options:
Options name:

USES:

Master Sites:
Expand this list (1 items)
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  1. https://codeload.github.com/rvaser/bioparser/tar.gz/3.0.12-2-g700e82a?dummy=/
Collapse this list.

Number of commits found: 5

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Apr 2021 08:09:01
 files touched by this commit commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  3.0.12.2
mat search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  3.0.12.2
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
03 Feb 2021 19:08:28
Original commit files touched by this commit Revision:563906  3.0.12.2
yuri search for other commits by this committer
biology/bioparser: Update 3.0.12 -> 3.0.12-2

Install target is added.
19 Jan 2021 09:56:15
Original commit files touched by this commit Revision:562040  3.0.12
yuri search for other commits by this committer
biology/bioparser: Cosmetic changes
19 Jan 2021 07:56:50
Original commit files touched by this commit Revision:562033  3.0.12
yuri search for other commits by this committer
New port: biology/bioparser: C++ header only parsing library for several formats
in bioinformatics

Number of commits found: 5