| Port details on branch 2025Q3 |
- ncbi-blast+ NCBI implementation of Basic Local Alignment Search Tool
- 2.17.0 biology
 =0      2.17.0Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2025-08-26 11:30:06
- Last Update: 2025-08-26 11:28:01
- Commit Hash: ef86e09
- Also Listed In: perl5 python
- License: PD
- WWW:
- https://blast.ncbi.nlm.nih.gov/
- Description:
- The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- ncbi-blast+>0:biology/ncbi-blast+
- Conflicts:
- CONFLICTS_INSTALL:
- To install the port:
- cd /usr/ports/biology/ncbi-blast+/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/ncbi-blast+
- pkg install ncbi-blast+
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: ncbi-blast+
- Flavors: there is no flavor information for this port.
- ONLY_FOR_ARCHS: aarch64 amd64 powerpc64 powerpc64le riscv64
- distinfo:
- TIMESTAMP = 1753183842
SHA256 (ncbi-blast-2.17.0+-src.tar.gz) = 502057a88e9990e34e62758be21ea474cc0ad68d6a63a2e37b2372af1e5ea147
SIZE (ncbi-blast-2.17.0+-src.tar.gz) = 29571791
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- grpc>0 : devel/grpc
- gmake>=4.4.1 : devel/gmake
- python3.11 : lang/python311
- perl5>=5.40.r<5.41 : lang/perl5.40
- Test dependencies:
-
- python3.11 : lang/python311
- Runtime dependencies:
-
- p5-List-MoreUtils>=0 : lang/p5-List-MoreUtils
- p5-JSON>=0 : converters/p5-JSON
- python3.11 : lang/python311
- perl5>=5.40.r<5.41 : lang/perl5.40
- Library dependencies:
-
- libdw.so : devel/elfutils
- liblmdb.so : databases/lmdb
- liblzo2.so : archivers/lzo2
- libnghttp2.so : www/libnghttp2
- libpcre2-8.so : devel/pcre2
- libsqlite3.so : databases/sqlite3
- libuv.so : devel/libuv
- libzstd.so : archivers/zstd
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- biology_ncbi-blast+
- USES:
- compiler:c++14-lang gmake localbase:ldflags perl5 python shebangfix
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
2.17.0
26 Aug 2025 11:28:01
 |
Jason W. Bacon (jwb) |
biology/ncbi-blast+: Update to 2.17.0
A few fixes and enhancements
Changes: https://www.ncbi.nlm.nih.gov/books/NBK131777/
Reported by: portscout
(cherry picked from commit c850bf3a31c1f2c0a7910ab005745bd098085dc8) |
Number of commits found: 1
|
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