| Port details on branch 2026Q1 |
- ncbi-blast+ NCBI implementation of Basic Local Alignment Search Tool
- 2.17.0 biology
 =0      2.17.0Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2026-02-24 01:24:19
- Last Update: 2026-02-24 01:20:53
- Commit Hash: 9ad923d
- Also Listed In: perl5 python
- License: PD
- WWW:
- https://blast.ncbi.nlm.nih.gov/
- Description:
- The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- ncbi-blast+>0:biology/ncbi-blast+
- Conflicts:
- CONFLICTS_INSTALL:
- To install the port:
- cd /usr/ports/biology/ncbi-blast+/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/ncbi-blast+
- pkg install ncbi-blast+
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: ncbi-blast+
- Flavors: there is no flavor information for this port.
- ONLY_FOR_ARCHS: aarch64 amd64
- distinfo:
- TIMESTAMP = 1753183842
SHA256 (ncbi-blast-2.17.0+-src.tar.gz) = 502057a88e9990e34e62758be21ea474cc0ad68d6a63a2e37b2372af1e5ea147
SIZE (ncbi-blast-2.17.0+-src.tar.gz) = 29571791
No package information for this port in our database- Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link:
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- grpc>0 : devel/grpc
- gmake>=4.4.1 : devel/gmake
- python3.11 : lang/python311
- perl5>=5.42.r<5.43 : lang/perl5.42
- Test dependencies:
-
- python3.11 : lang/python311
- Runtime dependencies:
-
- p5-List-MoreUtils>=0 : lang/p5-List-MoreUtils
- p5-JSON>=0 : converters/p5-JSON
- python3.11 : lang/python311
- perl5>=5.42.r<5.43 : lang/perl5.42
- Library dependencies:
-
- libdw.so : devel/elfutils
- liblmdb.so : databases/lmdb
- liblzo2.so : archivers/lzo2
- libnghttp2.so : www/libnghttp2
- libpcre2-8.so : devel/pcre2
- libsqlite3.so : databases/sqlite3
- libuv.so : devel/libuv
- libzstd.so : archivers/zstd
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- biology_ncbi-blast+
- USES:
- compiler:c++14-lang gmake localbase:ldflags perl5 python shebangfix
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
2.17.0
24 Feb 2026 01:20:53
 |
Robert Clausecker (fuz) |
biology/ncbi-blast+: only for aarch64, amd64
This port uses SIMD intrincis to compute CRC checksums.
It's probably easy to add a generic code path if desired.
Approved by: portmgr (build fix blanket)
MFH: 2026Q1
Sponsored by: Raptor Computing Systems, LLC
(cherry picked from commit c306479f2b4a4dd7c6d7b7c716574a25a0748986) |
Number of commits found: 1
|
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