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Current status

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Port details
pear-merger Memory-efficient and highly accurate paired-end read merger
0.9.6 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. 0.9.6Version of this port present on the latest quarterly branch.
Maintainer: jwb@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-04-04 17:21:55
Last Update: 2021-01-02 01:46:09
SVN Revision: 559904
License: CC-BY-NC-SA-3.0
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (5 items)
Collapse this list.
  1. bin/pearRM
  2. man/man1/pearRM.1.gz
  3. /usr/local/share/licenses/pear-merger-0.9.6/catalog.mk
  4. /usr/local/share/licenses/pear-merger-0.9.6/LICENSE
  5. /usr/local/share/licenses/pear-merger-0.9.6/CC-BY-NC-SA-3.0
Collapse this list.
Dependency lines:
  • pear-merger>0:biology/pear-merger
To install the port: cd /usr/ports/biology/pear-merger/ && make install clean
To add the package: pkg install pear-merger
PKGNAME: pear-merger
Flavors: there is no flavor information for this port.
distinfo:
Packages: (move your mouse over the cells for more information)
pear-merger
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd640.9.60.9.6
FreeBSD:11:armv6--
FreeBSD:11:i3860.9.60.9.6
FreeBSD:11:mips-0.9.6
FreeBSD:11:mips64-0.9.6
FreeBSD:12:aarch64--
FreeBSD:12:amd640.9.60.9.6
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3860.9.60.9.6
FreeBSD:12:mips0.9.60.9.6
FreeBSD:12:mips640.9.60.9.6
FreeBSD:12:powerpc64-0.9.6
FreeBSD:13:aarch64--
FreeBSD:13:amd640.9.6-
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3860.9.6-
FreeBSD:13:mips0.9.6-
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
 

This port is required by:
for Run
  1. biology/ddocent

Configuration Options
Master Sites:
Expand this list (1 items)
    Collapse this list.
  1. https://depot.galaxyproject.org/software/pear/
  2. Collapse this list.
Notes from UPDATING
These upgrade notes are taken from /usr/ports/UPDATING
  • 2018-03-08
    Affects: */php* */pecl* */pear*
    Author: mat@FreeBSD.org
    Reason: 
      PHP extensions and modules have been flavored.
    
      People using Poudriere 3.2+ and binary packages do not have to do anything if
      they are using PHP applications.
    
      PHP modules and extensions may have change their names from php5- or php7- to
      fully versionned phpXY-.
      PECL extensions and PEAR modules package names have changed from pecl- and
      pear- to phpXX-pecl and phpXX-pear-.
    
      To rename an installed package to match the new naming scheme, for example,
      for the imagick pecl extension, run:
    
        # pkg set -n pecl-imagick:php56-pecl-imagick
    
      For other people, to build the PHP 7.2 version of, for example,
      databases/php-memcached, you need to run:
    
        # make FLAVOR=php72 install
    
    

Number of commits found: 3

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
02 Jan 2021 01:46:09
Original commit files touched by this commit  0.9.6
Revision:559904
linimon search for other commits by this committer
For ports on riscv64 that fail the same (or similar ways) to aarch64, mark
them BROKEN.

While here, pet portlint (Makevar order).

Approved by:	portmgr (tier-2 blanket)
21 Jun 2018 23:52:37
Original commit files touched by this commit  0.9.6
Revision:473009
linimon search for other commits by this committer
Mark as broken on aarch64, and, where appropriate, armvX.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
04 Apr 2018 17:21:39
Original commit files touched by this commit  0.9.6
Revision:466449
jwb search for other commits by this committer
biology/pear-merger: Memory-efficient and accurate paired-end read merger

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D14959

Number of commits found: 3

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