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Port details
py-ete3 Framework for the analysis and visualization of trees
3.1.2_4 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 3.1.2_4Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2020-05-16 00:13:16
Last Update: 2021-04-07 08:09:01
Commit Hash: cf118cc
Also Listed In: python
License: GPLv3
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}ete3>0:biology/py-ete3@${PY_FLAVOR}
To install the port: cd /usr/ports/biology/py-ete3/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-ete3
  • pkg install py38-ete3
NOTE: This is a Python port. Instead of py38-ete3 listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-ete3
Package flavors (<flavor>: <package>)
  • py38: py38-ete3
distinfo:
Packages (timestamps in pop-ups are UTC):
py27-ete3
ABIlatestquarterly
FreeBSD:11:aarch64-3.1.1
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
py37-ete3
ABIlatestquarterly
FreeBSD:11:aarch64-3.1.1
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64-3.1.2_4
FreeBSD:13:aarch643.1.2_2-
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc643.1.2_4-
 
py38-ete3
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-3.1.2_4
FreeBSD:12:amd643.1.2_43.1.2_4
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3863.1.2_43.1.2_4
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64-3.1.2_4
FreeBSD:13:amd643.1.2_43.1.2_4
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i3863.1.2_43.1.2_4
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch643.1.2_4-
FreeBSD:14:amd643.1.2_4-
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i3863.1.2_4-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-numpy>=1.16,1<1.20,1 : math/py-numpy@py38
  2. py38-lxml>0 : devel/py-lxml@py38
  3. py38-six>0 : devel/py-six@py38
  4. py38-setuptools>0 : devel/py-setuptools@py38
  5. python3.8 : lang/python38
  6. py38-qt5-core>=5.15.4 : devel/py-qt5-core@py38
  7. py38-qt5-gui>=5.15.4 : x11-toolkits/py-qt5-gui@py38
  8. py38-qt5-opengl>=5.15.4 : x11/py-qt5-opengl@py38
  9. py38-qt5-printsupport>=5.15.4 : print/py-qt5-printsupport@py38
  10. py38-qt5-svg>=5.15.4 : graphics/py-qt5-svg@py38
  11. py38-qt5-widgets>=5.15.4 : x11-toolkits/py-qt5-widgets@py38
Runtime dependencies:
  1. py38-numpy>=1.16,1<1.20,1 : math/py-numpy@py38
  2. py38-lxml>0 : devel/py-lxml@py38
  3. py38-six>0 : devel/py-six@py38
  4. py38-setuptools>0 : devel/py-setuptools@py38
  5. python3.8 : lang/python38
  6. py38-qt5-core>=5.15.4 : devel/py-qt5-core@py38
  7. py38-qt5-gui>=5.15.4 : x11-toolkits/py-qt5-gui@py38
  8. py38-qt5-opengl>=5.15.4 : x11/py-qt5-opengl@py38
  9. py38-qt5-printsupport>=5.15.4 : print/py-qt5-printsupport@py38
  10. py38-qt5-svg>=5.15.4 : graphics/py-qt5-svg@py38
  11. py38-qt5-widgets>=5.15.4 : x11-toolkits/py-qt5-widgets@py38
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/e/ete3/
  2. https://pypi.org/packages/source/e/ete3/
Collapse this list.

Number of commits found: 9

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Apr 2021 08:09:01
 files touched by this commit commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  3.1.2_4
mat search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  3.1.2_4
mat search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
16 Mar 2021 09:29:54
Original commit files touched by this commit Revision:568547  3.1.2_4
lbartoletti search for other commits by this committer
PyQt5: Update PyQt5 to 5.15.4 and py-qtbuilder to 1.9.1

PR:		254218
Exp-run by:	antoine
08 Mar 2021 06:49:18
Original commit files touched by this commit Revision:567825  3.1.2_3
lbartoletti search for other commits by this committer
PyQt5: Update PyQt5 to 5.15.3, QScintilla2 to 2.12.0, py-qtbuilder to 1.9.0

* PyQt5: update to 5.15.3

This is a minor feature and bug-fix release. There are corresponding releases of
the other PyQt5-related packages.

 - Added the missing QImage.setAlphaChannel().
 - Support for the QtNetworkAuth library has been moved to a separate
PyQtNetworkAuth package.
 - Wheels no longer bundle the corresponding Qt libraries and instead
automatically install them from an external wheel.

* QScintilla2: update to 2.12.0

This adds support for Qt6 and removes support for Qt4.

 - Change the new distname (again)i due to a conflict
 - Use the new sip-build system

* devel/py-qtbuilder: update to 1.9.0
* devel/py-sip: fix flavor for sip-distinfo

PR:		253865
Exp-run by:	antoine
15 Dec 2020 17:56:00
Original commit files touched by this commit Revision:558168  3.1.2_2
lbartoletti search for other commits by this committer
Update PyQt5 to 5.15.2, sip to 5.5.0, py-qtbuilder to 1.6.0 and py-qt5-sip to
12.8.1

PR:		251764
Exp-run by: antoine
08 Dec 2020 20:03:07
Original commit files touched by this commit Revision:557300  3.1.2_1
lbartoletti search for other commits by this committer
Update Qt/PySide2 to 5.15.2 / PyQt to 5.15.1 / SIP to 5.4.0
This commit combines several updates.

- Update Qt to 5.12.2
- Update PyQt to 5.15.1
- Since PySide 5.15.1 is broken with Qt 5.15.2, so PySide and Shiboken are also
updated to 5.15.2.
- Update sip to 5.4.0

SIP is a collection of tools  to create Python bindings for C and C++ libraries
and used by PyQt and wxPython. There are some changes with sip5 [1]:
- python 3.5+ is required
- sip drops support of old deprecated methods as sipdistutils & cie.
- this version breaks also PyQt5 extension ABI. SIP files will be installed in
${PYTHON_SITELIBDIR}/PyQt${_PYQT_VERSION}/bindings
- some ports will use the new pyqtbuilder package with the pyproject.toml setup.
Instead if the project have a setup.py, you should use sip-build to build it.
- if a port needs sip, it should also needs pysip. BTW, py-qt5-core requires
pysip, so that should be enough for PyQt packages.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
05 Oct 2020 15:50:04
Original commit files touched by this commit Revision:551499  3.1.2_1
lbartoletti search for other commits by this committer
Update PyQt to 5.15.0, py-sip to 4.19.24 and qscintilla2 to 2.11.5

- Update PyQt to 5.15.0, py-sip to 4.19.24 and qscintilla2 to 2.11.5
- Use pypi for PYQT [1]
- Add devel/py-qt5-sip (Don't use it for now. It will be used in future updates
of PyQt with py-sip >= 5)
- Add missing py-qt5 ports: comms/py-qt5-sensors, devel/py-qt5-location,
devel/py-qt5-remoteobjects, net/py-qt5-networkauth
- Strip libs
- Refactor *_PATH and *_PORT parts

[1] RiverBankComputing doesn't offer links to download latest version of some
ports

PR:		247369
Reviewed by:	tcberner
Differential Revision:	https://reviews.freebsd.org/D25749
Exp-run by:	antoine
02 Sep 2020 03:54:05
Original commit files touched by this commit Revision:547317  3.1.2
yuri search for other commits by this committer
biology/py-ete3: Update 3.1.1 -> 3.1.2

Reported by:	portscout
16 May 2020 00:13:09
Original commit files touched by this commit Revision:535339  3.1.1
yuri search for other commits by this committer
New port: biology/py-ete3: Framework for the analysis and visualization of trees

Number of commits found: 9