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Port details
py-gffutils Work with GFF and GTF files in a flexible database framework
0.10.1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.10.1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-10-19 02:07:07
Last Update: 2021-04-07 08:09:01
Commit Hash: cf118cc
Also Listed In: python
License: MIT
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}gffutils>0:biology/py-gffutils@${PY_FLAVOR}
To install the port:
cd /usr/ports/biology/py-gffutils/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-gffutils
  • pkg install py38-gffutils
NOTE: This is a Python port. Instead of py38-gffutils listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-gffutils
Package flavors (<flavor>: <package>)
  • py38: py38-gffutils
distinfo:
Packages (timestamps in pop-ups are UTC):
py27-gffutils
ABIlatestquarterly
FreeBSD:11:aarch64-0.10.1
FreeBSD:11:amd64--
FreeBSD:11:armv6-0.10.1
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64-0.10.1
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64-0.10.1
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 
py37-gffutils
ABIlatestquarterly
FreeBSD:11:aarch64-0.10.1
FreeBSD:11:amd64--
FreeBSD:11:armv6-0.10.1
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64-0.10.1
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6-0.10.1
FreeBSD:12:armv7-0.10.1
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64-0.10.1
FreeBSD:12:powerpc64-0.10.1
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv60.10.1-
FreeBSD:13:armv70.10.1-
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc640.10.1-
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc640.10.1-
 
py38-gffutils
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd640.10.10.10.1
FreeBSD:11:armv6--
FreeBSD:11:i3860.10.10.10.1
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-0.10.1
FreeBSD:12:amd640.10.10.10.1
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3860.10.10.10.1
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch640.10.10.10.1
FreeBSD:13:amd640.10.10.10.1
FreeBSD:13:armv6-0.10.1
FreeBSD:13:armv7-0.10.1
FreeBSD:13:i3860.10.10.10.1
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64-0.10.1
FreeBSD:14:aarch640.10.1-
FreeBSD:14:amd640.10.1-
FreeBSD:14:armv60.10.1-
FreeBSD:14:armv70.10.1-
FreeBSD:14:i3860.10.1-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Runtime dependencies:
  1. py38-argcomplete>=1.9.4 : devel/py-argcomplete@py38
  2. py38-argh>=0.26.2 : devel/py-argh@py38
  3. py38-pyfaidx>=0.5.5.2 : biology/py-pyfaidx@py38
  4. py38-simplejson>0 : devel/py-simplejson@py38
  5. py38-six>=1.12.0 : devel/py-six@py38
  6. py38-setuptools>0 : devel/py-setuptools@py38
  7. python3.8 : lang/python38
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/g/gffutils/
  2. https://pypi.org/packages/source/g/gffutils/
Collapse this list.

Number of commits found: 7

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Apr 2021 08:09:01
 files touched by this commit commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  0.10.1
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  0.10.1
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
14 Jul 2020 07:59:28
Original commit files touched by this commit Revision:542200  0.10.1
antoine search for other commits by this committer
Unbreak bulk -a
16 Jun 2020 02:10:08
Original commit files touched by this commit Revision:539317  0.10.1
yuri search for other commits by this committer
biology/py-gffutils: Update 0.10 -> 0.10.1
31 Dec 2019 05:16:09
Original commit files touched by this commit Revision:521594  0.10
yuri search for other commits by this committer
biology/py-gffutils: Update 0.9 -> 0.10

Reported by:	portscout
10 Apr 2019 06:18:32
Original commit files touched by this commit Revision:498530  0.9_1
antoine search for other commits by this committer
Bump a few PORTREVISIONs after r498529

With hat:	portmgr
19 Oct 2018 02:06:54
Original commit files touched by this commit Revision:482400  0.9
yuri search for other commits by this committer
New port: biology/py-gffutils: Work with GFF and GTF files in a flexible
database framework

Number of commits found: 7