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Port details
py-pyfaidx Efficient pythonic random access to fasta subsequences
0.5.5.2_1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 0.5.5.2Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-10-19 02:05:49
Last Update: 2019-04-10 07:18:32
SVN Revision: 498530
Also Listed In: python
License: BSD3CLAUSE
Description:
SVNWeb : Homepage

There is no configure plist information for this port.

Dependency lines:
  • py36-pyfaidx>0:biology/py-pyfaidx
To install the port: cd /usr/ports/biology/py-pyfaidx/ && make install clean
To add the package: pkg install py36-pyfaidx
PKGNAME: py36-pyfaidx
Package flavors (<flavor>: <package>)
  • py36: py36-pyfaidx
  • py27: py27-pyfaidx
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py36-setuptools>0 : devel/py-setuptools@py36
  2. python3.6 : lang/python36
Runtime dependencies:
  1. py36-six>0 : devel/py-six@py36
  2. py36-setuptools>0 : devel/py-setuptools@py36
  3. python3.6 : lang/python36
This port is required by:
for Run
  1. biology/py-gffutils

Configuration Options

USES:

Master Sites:
  1. https://files.pythonhosted.org/packages/source/p/pyfaidx/
  2. https://pypi.org/packages/source/p/pyfaidx/
Notes from UPDATING
These upgrade notes are taken from /usr/ports/UPDATING
  • 2017-11-30
    Affects: */py*
    Author: mat@FreeBSD.org
    Reason: 
      Ports using Python via USES=python are now flavored.  All the py3-* ports
      have been removed and folded into their py-* master ports.
    
      People using Poudriere 3.2+ and binary packages do not have to do anything.
    
      For other people, to build the Python 3.6 version of, for example,
      databases/py-gdbm, you need to run:
    
        # make FLAVOR=py36 install
    
    

Number of commits found: 3

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
10 Apr 2019 06:18:32
Original commit files touched by this commit  0.5.5.2_1
Revision:498530
antoine search for other commits by this committer
Bump a few PORTREVISIONs after r498529

With hat:	portmgr
28 Oct 2018 04:34:15
Original commit files touched by this commit  0.5.5.2
Revision:483221
yuri search for other commits by this committer
biology/py-pyfaidx: Update 0.5.5.1 -> 0.5.5.2

Reported by:	portscout
19 Oct 2018 02:05:37
Original commit files touched by this commit  0.5.5.1
Revision:482399
yuri search for other commits by this committer
New port: biology/py-pyfaidx: Efficient pythonic random access to fasta
subsequences

Number of commits found: 3

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