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Port details
py-gffutils Work with GFF and GTF files in a flexible database framework
0.10 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port 0.10Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-10-19 02:07:07
Last Update: 2019-12-31 05:16:09
SVN Revision: 521594
Also Listed In: python
License: MIT
Description:
SVNWeb : Homepage

There is no configure plist information for this port.

Dependency lines:
  • py37-gffutils>0:biology/py-gffutils
To install the port: cd /usr/ports/biology/py-gffutils/ && make install clean
To add the package: pkg install py37-gffutils
PKGNAME: py37-gffutils
Package flavors (<flavor>: <package>)
  • py37: py37-gffutils
  • py27: py27-gffutils
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py37-setuptools>0 : devel/py-setuptools@py37
  2. python3.7 : lang/python37
Runtime dependencies:
  1. py37-argcomplete>=1.9.4 : devel/py-argcomplete@py37
  2. py37-argh>=0.26.2 : devel/py-argh@py37
  3. py37-pyfaidx>=0.5.5.2 : biology/py-pyfaidx@py37
  4. py37-simplejson>0 : devel/py-simplejson@py37
  5. py37-six>=1.12.0 : devel/py-six@py37
  6. py37-setuptools>0 : devel/py-setuptools@py37
  7. python3.7 : lang/python37
There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. https://files.pythonhosted.org/packages/source/g/gffutils/
  2. https://pypi.org/packages/source/g/gffutils/
Notes from UPDATING
These upgrade notes are taken from /usr/ports/UPDATING
  • 2017-11-30
    Affects: */py*
    Author: mat@FreeBSD.org
    Reason: 
      Ports using Python via USES=python are now flavored.  All the py3-* ports
      have been removed and folded into their py-* master ports.
    
      People using Poudriere 3.2+ and binary packages do not have to do anything.
    
      For other people, to build the Python 3.6 version of, for example,
      databases/py-gdbm, you need to run:
    
        # make FLAVOR=py36 install
    
    

Number of commits found: 3

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
31 Dec 2019 05:16:09
Original commit files touched by this commit  0.10
Revision:521594
yuri search for other commits by this committer
biology/py-gffutils: Update 0.9 -> 0.10

Reported by:	portscout
10 Apr 2019 06:18:32
Original commit files touched by this commit  0.9_1
Revision:498530
antoine search for other commits by this committer
Bump a few PORTREVISIONs after r498529

With hat:	portmgr
19 Oct 2018 02:06:54
Original commit files touched by this commit  0.9
Revision:482400
yuri search for other commits by this committer
New port: biology/py-gffutils: Work with GFF and GTF files in a flexible
database framework

Number of commits found: 3

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