notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photos
All times are UTC
Ukraine
The recently imposed "must be logged in" restriction is a response to increased bot traffic on the site. This affects search, commits, and vuxml pages.
Search engines are not blocked. Try using "site:www.freshports.org" and your search terms.
After the ports freeze to fix some stuff, the freeze is over. I have some work to do before FreshPorts can start processing commits again before it can start processing again. I've created an issue for that.
Port details on branch 2022Q4
taxonkit Practical and efficient NCBI taxonomy toolkit
0.13.0_1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.20.0_3Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-10-08 20:54:11
Last Update: 2022-10-08 20:47:13
Commit Hash: b2fb7a4
License: MIT
WWW:
https://bioinf.shenwei.me/taxonkit/
Description:
TaxonKit allows to: * list taxonomic subtrees (TaxIds) * query taxonomic lineage of given TaxIds * reformat lineage in canonical ranks * convert scientific names to TaxIds * filter TaxIds by taxonomic rank range * compute lowest common ancestor (LCA) for TaxIds * create TaxId changelog from dump archives
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
Collapse this list.
  1. bin/taxonkit
  2. /usr/local/share/licenses/taxonkit-0.13.0_1/catalog.mk
  3. /usr/local/share/licenses/taxonkit-0.13.0_1/LICENSE
  4. /usr/local/share/licenses/taxonkit-0.13.0_1/MIT
Collapse this list.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • taxonkit>0:biology/taxonkit
To install the port:
cd /usr/ports/biology/taxonkit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/taxonkit
  • pkg install taxonkit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: taxonkit
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1664069364 SHA256 (go/biology_taxonkit/taxonkit-v0.13.0/v0.13.0.mod) = 94b649063d9e17f19db8b47b1ba840e302e26b44b423523fc0abef0590122a9b SIZE (go/biology_taxonkit/taxonkit-v0.13.0/v0.13.0.mod) = 1000

Expand this list (2 items)

Collapse this list.

SHA256 (go/biology_taxonkit/taxonkit-v0.13.0/v0.13.0.zip) = fdc1e7aceaab3bdcfabce812c862ef2fa44a574a346d0d11e1134973f6b68439 SIZE (go/biology_taxonkit/taxonkit-v0.13.0/v0.13.0.zip) = 1598096

Collapse this list.


No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go119 : lang/go119
Fetch dependencies:
  1. go119 : lang/go119
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
biology_taxonkit
USES:
go:modules zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://proxy.golang.org/github.com/shenwei356/taxonkit/@v/
Collapse this list.

Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.13.0_1
08 Oct 2022 20:47:13
commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8 files touched by this commit
Dmitri Goutnik (dmgk) search for other commits by this committer
all: Bump PORTREVISION after lang/go{118,119} update

(cherry picked from commit bde51869ee0206eeaa2849d8ef28b14da59727a3)

Number of commits found: 1