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Port details on branch 2023Q3
taxonkit Practical and efficient NCBI taxonomy toolkit
0.14.2_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.0_7Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-08-04 15:02:22
Last Update: 2023-09-08 14:39:12
Commit Hash: 793b61c
License: MIT
WWW:
https://bioinf.shenwei.me/taxonkit/
Description:
TaxonKit allows to: * list taxonomic subtrees (TaxIds) * query taxonomic lineage of given TaxIds * reformat lineage in canonical ranks * convert scientific names to TaxIds * filter TaxIds by taxonomic rank range * compute lowest common ancestor (LCA) for TaxIds * create TaxId changelog from dump archives
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
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  1. bin/taxonkit
  2. /usr/local/share/licenses/taxonkit-0.14.2_2/catalog.mk
  3. /usr/local/share/licenses/taxonkit-0.14.2_2/LICENSE
  4. /usr/local/share/licenses/taxonkit-0.14.2_2/MIT
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USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • taxonkit>0:biology/taxonkit
To install the port:
cd /usr/ports/biology/taxonkit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/taxonkit
  • pkg install taxonkit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: taxonkit
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1681528717 SHA256 (go/biology_taxonkit/taxonkit-v0.14.2/v0.14.2.mod) = 821f2ea553848ba4acd76e01d18c1026ed94979d59314a16d2c1dd958a1fff92 SIZE (go/biology_taxonkit/taxonkit-v0.14.2/v0.14.2.mod) = 1022

Expand this list (2 items)

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SHA256 (go/biology_taxonkit/taxonkit-v0.14.2/v0.14.2.zip) = c02cbdd24e7c26b312b26fd63e0c1bf2de27fdab37d0905e8f473170e2031681 SIZE (go/biology_taxonkit/taxonkit-v0.14.2/v0.14.2.zip) = 1601649

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Packages (timestamps in pop-ups are UTC):
taxonkit
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.19.0_70.19.0_9-0.19.0_60.19.0_9n/an/an/a
FreeBSD:13:quarterly0.19.0_60.19.0_7-0.19.0_30.19.0_7n/an/an/a
FreeBSD:14:latest0.19.0_70.19.0_9-0.19.0_50.19.0_9---
FreeBSD:14:quarterly0.19.0_70.19.0_7-0.19.0_30.19.0_7---
FreeBSD:15:latest0.19.0_80.19.0_9n/a-n/an/a--
FreeBSD:15:quarterly0.19.0_70.19.0_7n/a-n/an/a--
FreeBSD:16:latest0.19.0_70.19.0_9n/a-n/an/a--
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go120 : lang/go120
Fetch dependencies:
  1. go120 : lang/go120
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_taxonkit
USES:
go:modules zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://proxy.golang.org/github.com/shenwei356/taxonkit/@v/
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Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.14.2_2
08 Sep 2023 14:39:12
commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go120 update

Approved by:	ports-secteam (blanket)
0.14.2_1
04 Aug 2023 14:36:07
commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go{119,120} update

Approved by:	ports-secteam (blanket)

Number of commits found: 2
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