notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photosAll times are UTC		 Ukraine
The recently imposed "must be logged in" restriction is a response to increased bot traffic on the site. This affects search, commits, and vuxml pages.
Search engines are not blocked. Try using "site:www.freshports.org" and your search terms.
Port details on branch 2026Q2
taxonkit Practical and efficient NCBI taxonomy toolkit
0.19.0_16 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.0_16Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2026-04-10 17:07:00
Last Update: 2026-05-09 17:30:33
Commit Hash: a67ac1c
License: MIT
WWW:
https://bioinf.shenwei.me/taxonkit/
Description:
TaxonKit allows to: * list taxonomic subtrees (TaxIds) * query taxonomic lineage of given TaxIds * reformat lineage in canonical ranks * convert scientific names to TaxIds * filter TaxIds by taxonomic rank range * compute lowest common ancestor (LCA) for TaxIds * create TaxId changelog from dump archives
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
Collapse this list.
  1. bin/taxonkit
  2. /usr/local/share/licenses/taxonkit-0.19.0_16/catalog.mk
  3. /usr/local/share/licenses/taxonkit-0.19.0_16/LICENSE
  4. /usr/local/share/licenses/taxonkit-0.19.0_16/MIT
Collapse this list.
USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • taxonkit>0:biology/taxonkit
To install the port:
cd /usr/ports/biology/taxonkit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/taxonkit
  • pkg install taxonkit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: taxonkit
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1741841211 SHA256 (go/biology_taxonkit/taxonkit-v0.19.0/v0.19.0.mod) = 2db99c67d0a822aaa626d7eca139cd6975ed2bbbfa8f8bbc939e622a8da5a22e SIZE (go/biology_taxonkit/taxonkit-v0.19.0/v0.19.0.mod) = 1747

Expand this list (2 items)

Collapse this list.

SHA256 (go/biology_taxonkit/taxonkit-v0.19.0/v0.19.0.zip) = f5d1b1f6b4dbffaa81773ac0012aa8ed152802dbfa1e90442cddeb5d2026689d SIZE (go/biology_taxonkit/taxonkit-v0.19.0/v0.19.0.zip) = 1598395

Collapse this list.

No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go125 : lang/go125
Fetch dependencies:
  1. go125 : lang/go125
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_taxonkit
USES:
go:modules zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://proxy.golang.org/github.com/shenwei356/taxonkit/@v/
Collapse this list.

Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.19.0_16
09 May 2026 17:30:33
commit hash: a67ac1c1ac354b79ab6fab7d07a32be91e2c3654commit hash: a67ac1c1ac354b79ab6fab7d07a32be91e2c3654commit hash: a67ac1c1ac354b79ab6fab7d07a32be91e2c3654commit hash: a67ac1c1ac354b79ab6fab7d07a32be91e2c3654 files touched by this commit		 Adam Weinberger (adamw) search for other commits by this committer 
various: Bump ports for Go 1.25.10
0.19.0_15
10 Apr 2026 16:19:03
commit hash: 9c91901491db265de51255eeec8093989f724305commit hash: 9c91901491db265de51255eeec8093989f724305commit hash: 9c91901491db265de51255eeec8093989f724305commit hash: 9c91901491db265de51255eeec8093989f724305 files touched by this commit		 Dag-Erling Smørgrav (des) search for other commits by this committer 
various: Bump go ports for go-1.25.9 / 1.26.2

Number of commits found: 2
Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
Security Policy
Privacy
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
mariadb1011-server*Jun 30
mariadb106-server*Jun 30
mariadb114-server*Jun 30
mariadb118-server*Jun 30
xorg-serverJun 01
xwaylandJun 01
chromiumMay 30
ungoogled-chromiumMay 30
gohugoMay 29
erlangMay 28
erlangMay 28
erlang-runtime27May 28
erlang-runtime27May 28
erlang-runtime27May 28
erlang-runtime28May 28

30 vulnerabilities affecting 333 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities

Last processed:
2026-06-02 01:40:21 UTC


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)

Calculated hourly:
Port count 34551
Broken 101
Deprecated 254
Ignore 215
Forbidden 0
Restricted 1
No CDROM 1
Vulnerable 41
Expired 17
Set to expire 186
Interactive 0
new 24 hours 4
new 48 hours12
new 7 days46
new fortnight99
new month173
Servers and bandwidth provided by
New York Internet, iXsystems, and RootBSD 		Valid HTML, CSS, and RSS. Copyright © 2000-2026 Dan Langille. All rights reserved.