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Port details on branch 2022Q4
unikmer Toolkit for nucleic acid k-mer analysis, set operations on k-mers
0.19.0_5 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.0_5Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-10-08 20:54:11
Last Update: 2022-10-08 20:47:13
Commit Hash: b2fb7a4
License: MIT
WWW:
https://github.com/shenwei356/unikmer
Description:
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers (sketch) optional with TaxIds but without count information. K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik. TaxIds can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
Collapse this list.
  1. bin/unikmer
  2. /usr/local/share/licenses/unikmer-0.19.0_5/catalog.mk
  3. /usr/local/share/licenses/unikmer-0.19.0_5/LICENSE
  4. /usr/local/share/licenses/unikmer-0.19.0_5/MIT
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Dependency lines:
  • unikmer>0:biology/unikmer
To install the port:
cd /usr/ports/biology/unikmer/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/unikmer
  • pkg install unikmer
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: unikmer
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1650995040 SHA256 (go/biology_unikmer/unikmer-v0.19.0/v0.19.0.mod) = 29ad5e5abe00b3a378833a564e238003da20fafcbf40d57bfe4ae8b28e9f1eb2 SIZE (go/biology_unikmer/unikmer-v0.19.0/v0.19.0.mod) = 1308

Expand this list (2 items)

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SHA256 (go/biology_unikmer/unikmer-v0.19.0/v0.19.0.zip) = 02bda2679d3fd23ae77e43fe330e122ee7d29fcdc6a7643ce5daa43c3a84436b SIZE (go/biology_unikmer/unikmer-v0.19.0/v0.19.0.zip) = 4284934

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Packages (timestamps in pop-ups are UTC):
unikmer
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.20.0_70.20.0_8-0.20.0_70.20.0_8---
FreeBSD:13:quarterly0.20.0_40.20.0_7-0.20.0_40.20.0_7---
FreeBSD:14:latest0.20.0_70.20.0_8-0.20.0_70.20.0_8---
FreeBSD:14:quarterly0.20.0_70.20.0_7-0.20.0_70.20.0_7---
FreeBSD:15:latest0.20.0_70.20.0_8n/a0.20.0_7n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go119 : lang/go119
Fetch dependencies:
  1. go119 : lang/go119
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_unikmer
USES:
go:modules perl5 zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://proxy.golang.org/github.com/shenwei356/unikmer/@v/
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Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.19.0_5
08 Oct 2022 20:47:13
commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8commit hash: b2fb7a40a410b10b2aa5b5b7a7a087b45bcaa9a8 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go{118,119} update

(cherry picked from commit bde51869ee0206eeaa2849d8ef28b14da59727a3)

Number of commits found: 1
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