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Port details on branch 2023Q3
unikmer Toolkit for nucleic acid k-mer analysis, set operations on k-mers
0.19.1_8 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.19.1_8Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-08-04 15:02:22
Last Update: 2023-09-08 14:39:12
Commit Hash: 793b61c
License: MIT
WWW:
https://github.com/shenwei356/unikmer
Description:
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers (sketch) optional with TaxIds but without count information. K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik. TaxIds can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
Collapse this list.
  1. bin/unikmer
  2. /usr/local/share/licenses/unikmer-0.19.1_8/catalog.mk
  3. /usr/local/share/licenses/unikmer-0.19.1_8/LICENSE
  4. /usr/local/share/licenses/unikmer-0.19.1_8/MIT
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Dependency lines:
  • unikmer>0:biology/unikmer
To install the port:
cd /usr/ports/biology/unikmer/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/unikmer
  • pkg install unikmer
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: unikmer
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1679318811 SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 7b62d5cd96cb392e6b06bec08dc810fbe1dda7a2201e95e2ff04a3c631048347 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.mod) = 1359

Expand this list (4 items)

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SHA256 (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = d2a25e1fb9eb1701de64f843de9653adf02bf343324c236d08f5d510d6c8e3d2 SIZE (go/biology_unikmer/unikmer-v0.19.1/v0.19.1.zip) = 4286117 SHA256 (go/biology_unikmer/unikmer-v0.19.1/golang-sys-v0.6.0_GH0.tar.gz) = b4f6d17c7a128f76169964b437cb66b3f2dbf9a33361928ec19dfecf7b03fc54 SIZE (go/biology_unikmer/unikmer-v0.19.1/golang-sys-v0.6.0_GH0.tar.gz) = 1434234

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No package information for this port in our database
Sometimes this happens. Not all ports have packages. Perhaps there is a build error. Check the fallout link: pkg-fallout
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go120 : lang/go120
Test dependencies:
  1. csvtk : science/csvtk
  2. perl5>=5.32.r0<5.33 : lang/perl5.32
Fetch dependencies:
  1. go120 : lang/go120
  2. ca_root_nss>0 : security/ca_root_nss
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_unikmer
USES:
go:modules perl5 zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://proxy.golang.org/github.com/shenwei356/unikmer/@v/
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Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.19.1_8
08 Sep 2023 14:39:12
commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992commit hash: 793b61c98913da3088efd5af67684d2eded3e992 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go120 update

Approved by:	ports-secteam (blanket)
0.19.1_7
04 Aug 2023 14:36:07
commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162commit hash: e7d39fc40a601f25b64b6f73a05219343c290162 files touched by this commit		 Dmitri Goutnik (dmgk) search for other commits by this committer 
all: Bump PORTREVISION after lang/go{119,120} update

Approved by:	ports-secteam (blanket)

Number of commits found: 2
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