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Port details on branch 2025Q4
unikmer Toolkit for nucleic acid k-mer analysis, set operations on k-mers
0.20.0_11 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.20.0_11Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2025-11-01 15:53:31
Last Update: 2025-11-01 15:48:35
Commit Hash: ae07b4c
License: MIT
WWW:
https://bioinf.shenwei.me/unikmer/
https://github.com/shenwei356/unikmer
Description:
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers (sketch) optional with TaxIds but without count information. K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik. TaxIds can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
HomepageHomepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (4 items)
Collapse this list.
  1. bin/unikmer
  2. /usr/local/share/licenses/unikmer-0.20.0_11/catalog.mk
  3. /usr/local/share/licenses/unikmer-0.20.0_11/LICENSE
  4. /usr/local/share/licenses/unikmer-0.20.0_11/MIT
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USE_RC_SUBR (Service Scripts)
  • no SUBR information found for this port
Dependency lines:
  • unikmer>0:biology/unikmer
To install the port:
cd /usr/ports/biology/unikmer/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/unikmer
  • pkg install unikmer
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: unikmer
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1718108535 SHA256 (go/biology_unikmer/unikmer-v0.20.0/v0.20.0.mod) = c0a619c514e9cf08be0a50dc494e8e890446a40d4b82043a2624b215ecc6b65e SIZE (go/biology_unikmer/unikmer-v0.20.0/v0.20.0.mod) = 1455

Expand this list (4 items)

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SHA256 (go/biology_unikmer/unikmer-v0.20.0/v0.20.0.zip) = 2e4625ea253e3b571ccfd30fb9d825bee13a3d49e1b665a9a5d3e2a647a60e9c SIZE (go/biology_unikmer/unikmer-v0.20.0/v0.20.0.zip) = 4288447 SHA256 (go/biology_unikmer/unikmer-v0.20.0/golang-sys-v0.21.0_GH0.tar.gz) = 06e5676d2c61345151e302c7138dd1282ce8ea3c5a6a5a03b7cb66a16c66dc22 SIZE (go/biology_unikmer/unikmer-v0.20.0/golang-sys-v0.21.0_GH0.tar.gz) = 1495683

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Packages (timestamps in pop-ups are UTC):
unikmer
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.20.0_120.20.0_13-0.20.0_100.20.0_13n/an/an/a
FreeBSD:13:quarterly0.20.0_100.20.0_11-0.20.0_70.20.0_11n/an/an/a
FreeBSD:14:latest0.20.0_120.20.0_13-0.20.0_90.20.0_13---
FreeBSD:14:quarterly0.20.0_110.20.0_11-0.20.0_70.20.0_11---
FreeBSD:15:latest0.20.0_130.20.0_13n/a-n/an/a--
FreeBSD:15:quarterly0.20.0_110.20.0_11n/a-n/an/a--
FreeBSD:16:latest0.20.0_110.20.0_13n/a-n/an/a--
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. go124 : lang/go124
Test dependencies:
  1. csvtk : science/csvtk
  2. perl5>=5.42.r<5.43 : lang/perl5.42
Fetch dependencies:
  1. go124 : lang/go124
There are no ports dependent upon this port
Configuration Options:
No options to configure
Options name:
biology_unikmer
USES:
go:modules perl5 zip
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://proxy.golang.org/github.com/shenwei356/unikmer/@v/
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Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.20.0_11
01 Nov 2025 15:48:35
commit hash: ae07b4cd9e5d2da82d1b03dfbd103c951d7a9114commit hash: ae07b4cd9e5d2da82d1b03dfbd103c951d7a9114commit hash: ae07b4cd9e5d2da82d1b03dfbd103c951d7a9114commit hash: ae07b4cd9e5d2da82d1b03dfbd103c951d7a9114 files touched by this commit		 Adam Weinberger (adamw) search for other commits by this committer 
various: Bump Go ports for 1.24.9

This is a direct commit to 2025Q4. It'll definitely bring things (esp.
PORTREVISION lines) out of sync with main, but trying to MFH the
associated bump commit would bring in a massive quantity of conflicts.

Number of commits found: 1
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