notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Ukraine
Some details on the 2023-01-16 website outage.
We just rebooted with several updates: * new HMTLify code * no port maintainer is now highly visible (e.g. https://freshports.org/security/sssd/) * fixed search logic error when using plain/ text details at https://github.com/FreshPorts/freshports/releases/tag/2.2.34
Port details
R-cran-coda Output analysis and diagnostics for MCMC
0.19.4 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2011-01-17 07:57:47
Last Update: 2022-09-07 21:58:51
Commit Hash: fb16dfe
License: GPLv2+
Description:
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb
pkg-plist: as obtained via: make generate-plist
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/R-cran-coda-0.19.4/catalog.mk
  2. /usr/local/share/licenses/R-cran-coda-0.19.4/LICENSE
  3. /usr/local/share/licenses/R-cran-coda-0.19.4/GPLv2+
Collapse this list.
Dependency lines:
  • R-cran-coda>0:math/R-cran-coda
To install the port:
cd /usr/ports/math/R-cran-coda/ && make install clean
To add the package, run one of these commands:
  • pkg install math/R-cran-coda
  • pkg install R-cran-coda
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: R-cran-coda
Flavors: there is no flavor information for this port.
distinfo:

Packages (timestamps in pop-ups are UTC):
R-cran-coda
ABIlatestquarterly
FreeBSD:11:aarch640.19.1_10.19.3_1
FreeBSD:11:amd640.19.40.19.4
FreeBSD:11:armv6pkg-fallout0.19.3_1
FreeBSD:11:i3860.19.40.19.4
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch640.19.1_10.19.4
FreeBSD:12:amd640.19.40.19.4
FreeBSD:12:armv60.19.1_10.19.3_1
FreeBSD:12:armv70.19.20.19.3_1
FreeBSD:12:i3860.19.40.19.4
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-fallout0.19.4
FreeBSD:13:aarch640.19.40.19.4
FreeBSD:13:amd640.19.40.19.4
FreeBSD:13:armv60.19.4pkg-fallout
FreeBSD:13:armv70.19.40.19.4
FreeBSD:13:i3860.19.40.19.4
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-fallout0.19.4
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch640.19.4pkg-fallout
FreeBSD:14:amd640.19.4pkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv70.19.4pkg-fallout
FreeBSD:14:i3860.19.4pkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc640.19.4pkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. R : math/R
Runtime dependencies:
  1. R : math/R
This port is required by:
for Build
  1. math/R-cran-MCMCpack
for Run
  1. math/R-cran-MCMCpack

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message

Master Sites:
Expand this list (22 items)
Collapse this list.
  1. http://camoruco.ing.uc.edu.ve/cran/src/contrib/
  2. http://camoruco.ing.uc.edu.ve/cran/src/contrib/Archive/coda/
  3. http://cran.utstat.utoronto.ca/src/contrib/
  4. http://cran.utstat.utoronto.ca/src/contrib/Archive/coda/
  5. https://cloud.r-project.org/src/contrib/
  6. https://cloud.r-project.org/src/contrib/Archive/coda/
  7. https://cran.cnr.berkeley.edu/src/contrib/
  8. https://cran.cnr.berkeley.edu/src/contrib/Archive/coda/
  9. https://cran.csiro.au/src/contrib/
  10. https://cran.csiro.au/src/contrib/Archive/coda/
  11. https://cran.gis-lab.info/src/contrib/
  12. https://cran.gis-lab.info/src/contrib/Archive/coda/
  13. https://cran.ism.ac.jp/src/contrib/
  14. https://cran.ism.ac.jp/src/contrib/Archive/coda/
  15. https://cran.ma.imperial.ac.uk/src/contrib/
  16. https://cran.ma.imperial.ac.uk/src/contrib/Archive/coda/
  17. https://mirror.las.iastate.edu/CRAN/src/contrib/
  18. https://mirror.las.iastate.edu/CRAN/src/contrib/Archive/coda/
  19. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/
  20. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/Archive/coda/
  21. https://stat.ethz.ch/CRAN/src/contrib/
  22. https://stat.ethz.ch/CRAN/src/contrib/Archive/coda/
Collapse this list.

Number of commits found: 44

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
07 Sep 2022 21:58:51
commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
0.19.4
07 Sep 2022 21:10:59
commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.19.4
20 Jul 2022 14:22:24
commit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5da files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
math: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Aaron Dalton <aaron@daltons.ca>
  *  Alessando Sagratini <ale_sagra@hotmail.com>
  *  Alex Dupre <ale@FreeBSD.org>
  *  Alexey Dokuchaev <danfe@FreeBSD.org>
  *  Amarendra Godbole <amarendra.godbole@gmail.com>
  *  Anders Nordby <anders@FreeBSD.org>
  *  Andreas Fehlner (fehlner@gmx.de)
  *  Andrew L. Neporada <andrew@chg.ru>
  *  Andrey <gugu@zoo.rambler.ru>
  *  Andrey Zakhvatov
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.19.4
06 Apr 2021 14:31:07
commit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
0.19.4
07 Oct 2020 08:47:58
Revision:551622Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.19.4
0.19.3_1
18 Sep 2020 09:36:54
Revision:548879Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Fix LICENSE
- Whitespace fix
- Update WWW

Approved by:	portmgr blanket
0.19.3_1
05 May 2020 16:07:54
Revision:534095Original commit files touched by this commit
jrm search for other commits by this committer
math/R: Update to version 4.0.0

Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html

Also bump PORTREVISION of ports that depend on math/R.

Submitted by:	wen (in part)
Reviewed by:	jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision:	https://reviews.freebsd.org/D24572
0.19.3
03 Sep 2019 01:47:23
Revision:510914Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.19.3
0.19.2_2
26 Jul 2019 20:46:57
Revision:507372Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
0.19.2_1
12 Dec 2018 01:35:36
Revision:487272Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
0.19.2
09 Oct 2018 12:08:02
Revision:481626Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.19.2
0.19.1_1
10 Mar 2018 17:46:06
Revision:464084Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
0.19.1
13 Dec 2016 03:09:16
Revision:428462Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.19-1
0.18.1
21 Oct 2015 06:14:06
Revision:399889Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.18.1
0.17.1
30 Apr 2015 03:09:34
Revision:385023Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.17.1
- Add LICENSE
> Description of fields to fill in above:                     76 columns --|
> PR:                       If a GNATS PR is affected by the change.
> Differential Revision:    https://reviews.freebsd.org/D### (*full* phabric URL
needed).
> Submitted by:             If someone else sent in the change.
> Reviewed by:              If someone else reviewed your modification.
> Approved by:              If you needed approval for this commit.
> Obtained from:            If the change is from a third party.
> MFC after:                N [day[s]|week[s]|month[s]].  Request a reminder
email.
> MFH:                      Ports tree branch name.  Request approval for merge.
> Relnotes:                 Set to 'yes' for mention in release notes.
> Security:                 Vulnerability reference (one per line) or
description.
> Sponsored by:             If the change was sponsored by an organization.
> Empty fields above will be automatically removed.

M    R-cran-coda/Makefile
M    R-cran-coda/distinfo
0.16.1_6
10 Sep 2014 20:50:37
Revision:367888Original commit files touched by this commit
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
0.16.1_5
10 Mar 2014 20:55:22
Revision:347809Original commit files touched by this commit
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
0.16.1_4
28 Dec 2013 10:28:41
Revision:337846Original commit files touched by this commit
dbn search for other commits by this committer
Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
0.16.1_4
27 Nov 2013 18:56:44
Revision:335044Original commit files touched by this commit
dbn search for other commits by this committer
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
0.16.1_4
13 Nov 2013 08:19:35
Revision:333659Original commit files touched by this commit
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
0.16.1_3
26 Oct 2013 00:52:36
Revision:331644Original commit files touched by this commit
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.16.1_2
20 Sep 2013 20:55:06
Revision:327746Original commit files touched by this commit
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
math)
0.16.1_2
28 May 2013 15:15:06
Revision:319316Original commit files touched by this commit
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
0.16.1_1
07 Mar 2013 04:21:35
Revision:313562Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
0.16.1
15 Jan 2013 06:24:08
Revision:310428Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.16.1
0.15.2_1
04 Jan 2013 17:51:39
Revision:309935Original commit files touched by this commit
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
0.15.2
01 Oct 2012 09:46:10
Revision:305101Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.15-2
- Convert to new Makefile format
0.15.1
24 Jul 2012 05:06:44
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.15.1
0.14.7_2
26 Jun 2012 23:57:00
Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
0.14.7_1
04 May 2012 20:56:15
Original commit files touched by this commit
bf search for other commits by this committer
- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
0.14.7
09 Apr 2012 02:33:03
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.14.7

Feature safe:   yes
0.14.6_3
03 Mar 2012 16:59:36
Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.14.2, and adjust dependent ports
0.14.6_2
18 Jan 2012 23:04:08
Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.14.1, and adjust dependent ports
0.14.6_1
27 Nov 2011 07:02:15
Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
0.14.6
15 Nov 2011 20:09:02
Original commit files touched by this commit
tota search for other commits by this committer
- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
0.14.6
09 Nov 2011 06:41:15
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.14.6
0.14.4_1
11 Oct 2011 14:19:46
Original commit files touched by this commit
bf search for other commits by this committer
update math/R to 2.13.2, and adjust dependent ports
0.14.4
23 Aug 2011 11:42:29
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 0.14.4
0.14.2_2
28 Jul 2011 04:19:58
Original commit files touched by this commit
bf search for other commits by this committer
update R to 2.13.1 [1], and adjust dependent ports (this
includes workarounds intended to fix the broken sparc64
build, and fixes to the static libR, which is now in a
separate slave port, math/libR)

PR:             158947 [1]
Submitted by:   wen ([1], independently)
0.14.2_1
07 May 2011 03:29:59
Original commit files touched by this commit
bf search for other commits by this committer
- update to 2.13.0
- switch to the bundled Rblas and Rlapack by default (this
  can be changed by setting BLAS and LAPACK) which favors
  correctness in some corner cases over a slight performance
  penalty; this will be revisited after the blas and lapack
  updates
- replace the STATIC_LIBR option with a LIBR option (on
  by default): if on, libR.a and libR.so are installed,
  and R is linked to libR.so. Otherwise, R is static, and
  no libRs are installed.
- remove the superfluous copy of libR.so in ${LOCALBASE}/lib [1]
- enable the cairo and pango elements in the X11() graphics
  device by default, controlled by new PANGOCAIRO option
- add a few small patches to dependent ports, bumping
  PORTREVISION where necessary

PR:             153309 [1]
Approved by:    thierry (rkward*), wen (rpy*, R-cran-*)
0.14.2
30 Apr 2011 07:59:13
Original commit files touched by this commit
bf search for other commits by this committer
Use DISTVERSION for CRAN ports with hyphenated versions

Approved by:    wen
0.14_2
28 Feb 2011 16:03:13
Original commit files touched by this commit
bf search for other commits by this committer
- Update R to 2.12.2, a bugfix release
- Bump PORTREVISION of dependent ports,
  where necessary

Approved by:    makc, miwi (mentors, implicit)
0.14_1
29 Jan 2011 16:53:21
Original commit files touched by this commit
bf search for other commits by this committer
- Update R to 2.12.1
- Bump PORTREVISION of
  dependent ports

Approved by:    makc, miwi (mentors, implicit)
                pav (portmgr)
Feature safe:   yes
0.14
17 Jan 2011 07:57:07
Original commit files touched by this commit
wen search for other commits by this committer
R-cran-coda is a R module for output analysis and diagnostics for
Markov Chain Monte Carlo simulations.

WWW: http://cran.case.edu/web/packages/coda/index.html

Feature safe:   yes

Number of commits found: 44