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Port details
R-cran-pbkrtest Parametric bootstrap and Kenward-Roger-based methods for mixed model comparison
0.5.2 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.5.2Version of this port present on the latest quarterly branch.
Maintainer: tota@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2015-11-15 15:07:17
Last Update: 2023-05-12 04:25:54
Commit Hash: d9caee4
License: GPLv2+
WWW:
https://cran.r-project.org/web/packages/pbkrtest/
Description:
Test in linear mixed effects models. Attention is on linear mixed effects models as implemented in the lme4 package. The package implements a parametric bootstrap test. The package implements a Kenward-Roger modification of F-tests.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/R-cran-pbkrtest-0.5.2/catalog.mk
  2. /usr/local/share/licenses/R-cran-pbkrtest-0.5.2/LICENSE
  3. /usr/local/share/licenses/R-cran-pbkrtest-0.5.2/GPLv2+
Collapse this list.
Dependency lines:
  • R-cran-pbkrtest>0:math/R-cran-pbkrtest
To install the port:
cd /usr/ports/math/R-cran-pbkrtest/ && make install clean
To add the package, run one of these commands:
  • pkg install math/R-cran-pbkrtest
  • pkg install R-cran-pbkrtest
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: R-cran-pbkrtest
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1682476692 SHA256 (pbkrtest_0.5.2.tar.gz) = 8e79adf035a0fcf3c82145ad55847497379e009f7be880ba3007ebeb2e69b6e3 SIZE (pbkrtest_0.5.2.tar.gz) = 75295

Packages (timestamps in pop-ups are UTC):
R-cran-pbkrtest
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest0.5.20.5.2--0.5.2---
FreeBSD:13:quarterly0.5.20.5.2--0.5.2---
FreeBSD:14:latest0.5.20.5.2--0.5.2---
FreeBSD:14:quarterly0.5.20.5.2--0.5.2---
FreeBSD:15:latest0.5.20.5.2n/a-n/a--0.5.2
FreeBSD:15:quarterly--n/a-n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. R-cran-broom>0 : devel/R-cran-broom
  2. R-cran-dplyr>0 : math/R-cran-dplyr
  3. R-cran-lme4>=1.1.31 : math/R-cran-lme4
  4. R-cran-numDeriv>0 : math/R-cran-numDeriv
  5. R : math/R
Runtime dependencies:
  1. R-cran-broom>0 : devel/R-cran-broom
  2. R-cran-dplyr>0 : math/R-cran-dplyr
  3. R-cran-lme4>=1.1.31 : math/R-cran-lme4
  4. R-cran-numDeriv>0 : math/R-cran-numDeriv
  5. R : math/R
This port is required by:
for Run
  1. math/R-cran-car

Configuration Options:
No options to configure
Options name:
math_R-cran-pbkrtest
USES:
cran:auto-plist
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (22 items)
Collapse this list.
  1. http://camoruco.ing.uc.edu.ve/cran/src/contrib/
  2. http://camoruco.ing.uc.edu.ve/cran/src/contrib/Archive/pbkrtest/
  3. http://cran.utstat.utoronto.ca/src/contrib/
  4. http://cran.utstat.utoronto.ca/src/contrib/Archive/pbkrtest/
  5. https://cloud.r-project.org/src/contrib/
  6. https://cloud.r-project.org/src/contrib/Archive/pbkrtest/
  7. https://cran.cnr.berkeley.edu/src/contrib/
  8. https://cran.cnr.berkeley.edu/src/contrib/Archive/pbkrtest/
  9. https://cran.csiro.au/src/contrib/
  10. https://cran.csiro.au/src/contrib/Archive/pbkrtest/
  11. https://cran.gis-lab.info/src/contrib/
  12. https://cran.gis-lab.info/src/contrib/Archive/pbkrtest/
  13. https://cran.ism.ac.jp/src/contrib/
  14. https://cran.ism.ac.jp/src/contrib/Archive/pbkrtest/
  15. https://cran.ma.imperial.ac.uk/src/contrib/
  16. https://cran.ma.imperial.ac.uk/src/contrib/Archive/pbkrtest/
  17. https://mirror.las.iastate.edu/CRAN/src/contrib/
  18. https://mirror.las.iastate.edu/CRAN/src/contrib/Archive/pbkrtest/
  19. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/
  20. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/Archive/pbkrtest/
  21. https://stat.ethz.ch/CRAN/src/contrib/
  22. https://stat.ethz.ch/CRAN/src/contrib/Archive/pbkrtest/
Collapse this list.

Number of commits found: 19

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.5.2
12 May 2023 04:25:54
commit hash: d9caee489cf6abebf3afce5c4611cc3112493c3ecommit hash: d9caee489cf6abebf3afce5c4611cc3112493c3ecommit hash: d9caee489cf6abebf3afce5c4611cc3112493c3ecommit hash: d9caee489cf6abebf3afce5c4611cc3112493c3e files touched by this commit
TAKATSU Tomonari (tota) search for other commits by this committer
math/R-cran-pbkrtest: Update to 0.5.2
0.5.1_1
23 Apr 2023 09:09:58
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b files touched by this commit
Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
0.5.1
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.5.1
20 Jul 2022 14:22:24
commit hash: f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash: f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash: f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash: f53eb28489aa8f30712cd8772d1a0e05c394a5da files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
math: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Aaron Dalton <aaron@daltons.ca>
  *  Alessando Sagratini <ale_sagra@hotmail.com>
  *  Alex Dupre <ale@FreeBSD.org>
  *  Alexey Dokuchaev <danfe@FreeBSD.org>
  *  Amarendra Godbole <amarendra.godbole@gmail.com>
  *  Anders Nordby <anders@FreeBSD.org>
  *  Andreas Fehlner (fehlner@gmx.de)
  *  Andrew L. Neporada <andrew@chg.ru>
  *  Andrey <gugu@zoo.rambler.ru>
  *  Andrey Zakhvatov
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.5.1
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
0.5.1
11 Mar 2021 10:19:49
Revision:568073Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.5.1
0.5.0.1
26 Dec 2020 04:32:05
Revision:559271Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.5-0.1
0.4.8.6_1
05 May 2020 16:07:54
Revision:534095Original commit files touched by this commit
jrm search for other commits by this committer
math/R: Update to version 4.0.0

Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html

Also bump PORTREVISION of ports that depend on math/R.

Submitted by:	wen (in part)
Reviewed by:	jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision:	https://reviews.freebsd.org/D24572
0.4.8.6
01 Apr 2020 17:28:42
Revision:530229Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.4-8.6
0.4.7_3
26 Jul 2019 20:46:57
Revision:507372Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
0.4.7_2
12 Dec 2018 01:35:36
Revision:487272Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
0.4.7_1
10 Mar 2018 17:46:06
Revision:464084Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
0.4.7
04 May 2017 03:00:36
Revision:440081Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.4-7
0.4.6
18 Jun 2016 03:45:40
Revision:417044Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.4-6
0.4.5
01 Apr 2016 14:16:20
Revision:412348Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.

With hat:	portmgr
Sponsored by:	Absolight
0.4.5
24 Jan 2016 12:33:30
Revision:407113Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.4-5
0.4.4
24 Jan 2016 03:50:07
Revision:407076Original commit files touched by this commit
tota search for other commits by this committer
- Update to 0.4-4
- Fix LICENSE
0.4.2
15 Nov 2015 15:07:09
Revision:401708Original commit files touched by this commit
tota search for other commits by this committer
- Add new port: math/R-cran-pbkrtest

  Test in linear mixed effects models. Attention is on linear mixed
  effects models as implemented in the lme4 package. The package
  implements a parametric bootstrap test. The package implements a
  Kenward-Roger modification of F-tests.

  WWW: https://cran.r-project.org/web/packages/pbkrtest/

Number of commits found: 19