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We just rebooted with several updates: * new HMTLify code * no port maintainer is now highly visible (e.g. https://freshports.org/security/sssd/) * fixed search logic error when using plain/ text details at https://github.com/FreshPorts/freshports/releases/tag/2.2.34
Port details
R-cran-car Companion to Applied Regression
3.1.1 math on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2009-05-02 17:34:13
Last Update: 2022-11-03 00:19:12
Commit Hash: e01b30d
People watching this port, also watch:: SparseBitSet, py39-cysignals, R-cran-eRm, python
License: GPLv2+
Description:
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb
pkg-plist: as obtained via: make generate-plist
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/R-cran-car-3.1.1/catalog.mk
  2. /usr/local/share/licenses/R-cran-car-3.1.1/LICENSE
  3. /usr/local/share/licenses/R-cran-car-3.1.1/GPLv2+
Collapse this list.
Dependency lines:
  • R-cran-car>0:math/R-cran-car
To install the port:
cd /usr/ports/math/R-cran-car/ && make install clean
To add the package, run one of these commands:
  • pkg install math/R-cran-car
  • pkg install R-cran-car
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: R-cran-car
Flavors: there is no flavor information for this port.
distinfo:

Packages (timestamps in pop-ups are UTC):
R-cran-car
ABIlatestquarterly
FreeBSD:11:aarch642.1.6_13.0.8
FreeBSD:11:amd643.0.113.0.10
FreeBSD:11:armv6pkg-falloutpkg-fallout
FreeBSD:11:i3863.0.113.0.10
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch642.1.6_13.1.1
FreeBSD:12:amd643.1.13.1.1
FreeBSD:12:armv6pkg-falloutpkg-fallout
FreeBSD:12:armv7pkg-falloutpkg-fallout
FreeBSD:12:i3863.1.13.1.1
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-fallout3.0.10
FreeBSD:13:aarch643.1.13.1.1
FreeBSD:13:amd643.1.13.1.1
FreeBSD:13:armv6pkg-falloutpkg-fallout
FreeBSD:13:armv7pkg-falloutpkg-fallout
FreeBSD:13:i3863.1.13.1.1
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch643.1.1pkg-fallout
FreeBSD:14:amd643.1.1pkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv7pkg-falloutpkg-fallout
FreeBSD:14:i3863.1.1pkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc643.1.1pkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. R : math/R
Runtime dependencies:
  1. R-cran-maptools>0 : astro/R-cran-maptools
  2. R-cran-abind>0 : devel/R-cran-abind
  3. R-cran-carData>=3.0.0 : math/R-cran-carData
  4. R-cran-lme4>0 : math/R-cran-lme4
  5. R-cran-pbkrtest>=0.4.4 : math/R-cran-pbkrtest
  6. R-cran-quantreg>0 : math/R-cran-quantreg
  7. R-cran-rio>0 : textproc/R-cran-rio
  8. R-cran-stringi>=0 : textproc/R-cran-stringi
  9. R : math/R
This port is required by:
for Run
  1. finance/R-cran-AER
  2. math/rkward

Deleted ports which required this port:

Expand this list of 2 deleted ports
  1. math/rkward-kde*
  2. math/rkward-kde4*
  3. Collapse this list of deleted ports.
* - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...

Configuration Options:
Options name:
USES:
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (22 items)
Collapse this list.
  1. http://camoruco.ing.uc.edu.ve/cran/src/contrib/
  2. http://camoruco.ing.uc.edu.ve/cran/src/contrib/Archive/car/
  3. http://cran.utstat.utoronto.ca/src/contrib/
  4. http://cran.utstat.utoronto.ca/src/contrib/Archive/car/
  5. https://cloud.r-project.org/src/contrib/
  6. https://cloud.r-project.org/src/contrib/Archive/car/
  7. https://cran.cnr.berkeley.edu/src/contrib/
  8. https://cran.cnr.berkeley.edu/src/contrib/Archive/car/
  9. https://cran.csiro.au/src/contrib/
  10. https://cran.csiro.au/src/contrib/Archive/car/
  11. https://cran.gis-lab.info/src/contrib/
  12. https://cran.gis-lab.info/src/contrib/Archive/car/
  13. https://cran.ism.ac.jp/src/contrib/
  14. https://cran.ism.ac.jp/src/contrib/Archive/car/
  15. https://cran.ma.imperial.ac.uk/src/contrib/
  16. https://cran.ma.imperial.ac.uk/src/contrib/Archive/car/
  17. https://mirror.las.iastate.edu/CRAN/src/contrib/
  18. https://mirror.las.iastate.edu/CRAN/src/contrib/Archive/car/
  19. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/
  20. https://mirrors.tuna.tsinghua.edu.cn/CRAN/src/contrib/Archive/car/
  21. https://stat.ethz.ch/CRAN/src/contrib/
  22. https://stat.ethz.ch/CRAN/src/contrib/Archive/car/
Collapse this list.

Number of commits found: 79

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
3.1.1
03 Nov 2022 00:19:12
commit hash:e01b30d009d1854e90ae1f44143d7e929b0f2598commit hash:e01b30d009d1854e90ae1f44143d7e929b0f2598commit hash:e01b30d009d1854e90ae1f44143d7e929b0f2598commit hash:e01b30d009d1854e90ae1f44143d7e929b0f2598 files touched by this commit
Wen Heping (wen) search for other commits by this committer
math/R-cran-car: Update to 3.1.1
07 Sep 2022 21:58:51
commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
3.1.0
07 Sep 2022 21:10:59
commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
3.1.0
20 Jul 2022 14:22:24
commit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5da files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
math: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Aaron Dalton <aaron@daltons.ca>
  *  Alessando Sagratini <ale_sagra@hotmail.com>
  *  Alex Dupre <ale@FreeBSD.org>
  *  Alexey Dokuchaev <danfe@FreeBSD.org>
  *  Amarendra Godbole <amarendra.godbole@gmail.com>
  *  Anders Nordby <anders@FreeBSD.org>
  *  Andreas Fehlner (fehlner@gmx.de)
  *  Andrew L. Neporada <andrew@chg.ru>
  *  Andrey <gugu@zoo.rambler.ru>
  *  Andrey Zakhvatov
(Only the first 15 lines of the commit message are shown above View all of this commit message)
3.1.0
22 Jun 2022 08:38:16
commit hash:606431835053afd81ebf0494f70017f5e01b0d4acommit hash:606431835053afd81ebf0494f70017f5e01b0d4acommit hash:606431835053afd81ebf0494f70017f5e01b0d4acommit hash:606431835053afd81ebf0494f70017f5e01b0d4a files touched by this commit
Wen Heping (wen) search for other commits by this committer
math/R-cran-car: Update to 3.1.0
3.0.13
07 May 2022 07:00:52
commit hash:dabad2b397e714040037681612c667a705c3741bcommit hash:dabad2b397e714040037681612c667a705c3741bcommit hash:dabad2b397e714040037681612c667a705c3741bcommit hash:dabad2b397e714040037681612c667a705c3741b files touched by this commit
Wen Heping (wen) search for other commits by this committer
math/R-cran-car: Update to 3.0.13
3.0.12
13 Dec 2021 02:45:25
commit hash:d77268753090d86cdec7b9fe108debcd9cc2b2e7commit hash:d77268753090d86cdec7b9fe108debcd9cc2b2e7commit hash:d77268753090d86cdec7b9fe108debcd9cc2b2e7commit hash:d77268753090d86cdec7b9fe108debcd9cc2b2e7 files touched by this commit
Wen Heping (wen) search for other commits by this committer
math/R-cran-car: Update to 3.0.12
3.0.11
12 Jul 2021 11:06:16
commit hash:d115f9ab3e6030f8563a69309b7c22e4ba6bc49bcommit hash:d115f9ab3e6030f8563a69309b7c22e4ba6bc49bcommit hash:d115f9ab3e6030f8563a69309b7c22e4ba6bc49bcommit hash:d115f9ab3e6030f8563a69309b7c22e4ba6bc49b files touched by this commit
Wen Heping (wen) search for other commits by this committer
math/R-cran-car: Update to 3.0.11
3.0.10
06 Apr 2021 14:31:07
commit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
3.0.10
07 Oct 2020 10:33:29
Revision:551626Original commit files touched by this commit
wen search for other commits by this committer
- Update to 3.0.10
3.0.9
26 Sep 2020 09:33:33
Revision:550143Original commit files touched by this commit
wen search for other commits by this committer
- Update to 3.0.9
3.0.8
09 Jun 2020 06:24:09
Revision:538287Original commit files touched by this commit
wen search for other commits by this committer
- Update to 3.0.8
3.0.7_1
05 May 2020 16:07:54
Revision:534095Original commit files touched by this commit
jrm search for other commits by this committer
math/R: Update to version 4.0.0

Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html

Also bump PORTREVISION of ports that depend on math/R.

Submitted by:	wen (in part)
Reviewed by:	jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision:	https://reviews.freebsd.org/D24572
3.0.7
20 Mar 2020 08:59:02
Revision:528766Original commit files touched by this commit
wen search for other commits by this committer
- Update to 3.0.7
3.0.6
22 Feb 2020 10:50:37
Revision:526753Original commit files touched by this commit
wen search for other commits by this committer
- Update to 3.0.6
- Take maintainership
3.0.2_2
03 Feb 2020 20:21:08
Revision:525092Original commit files touched by this commit
rene search for other commits by this committer
Return dbn's ports to the pool after safekeeping his commit bit.
3.0.2_2
26 Jul 2019 20:46:57
Revision:507372Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
3.0.2_1
12 Dec 2018 01:35:36
Revision:487272Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
3.0.2
24 Oct 2018 16:31:07
Revision:482910Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: updated to version 3.0-2

 - removed PORTREVISION due to version bump
 - add new run dependencies:
   - astro/R-cran-maptools
   - devel/R-cran-abind
   - math/R-cran-carData
   - math/R-cran-lme4
   - textproc/R-cran-rio
 - remove unused test dependency:
   - math/R-cran-lme4
 - update description to align with CRAN package
 - update website URL to align with CRAN package
 - changelog:
   - This version deals with a technical problem (reported by Don van den
     Bergh), implementing a solution suggested by Brian Ripley: Rather than
     importing utils::askYesNo(), which is unavailable before R 3.5.0, a
     local unexported copy is supplied in the car package, to be removed
     after version 3.0-2.

Generated by:	portcran (0.1.9)
2.1.6_1
10 Mar 2018 17:46:06
Revision:464084Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
2.1.6
18 Dec 2017 07:32:48
Revision:456600Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: updated to version 2.1-6

 - remove unused test dependencies:
   - math/R-cran-nloptr
 - changelog:
   - Made several functions compatible with vcov() in R-devel (3.5.0).

Generated by:	portcran (0.1.6)
2.1.5
09 Jul 2017 10:07:34
Revision:445398Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: updated to version 2.1-5

 - no changelog provided

Generated by:	portcran (0.1.5)
2.1.4
18 Jun 2017 18:09:17
Revision:443845Original commit files touched by this commit
dbn search for other commits by this committer
qa: add check for NO_ARCH

If NO_ARCH is set then check that no FreeBSD elf(5) files are in $STAGEDIR.
If an elf(5) file is bundles as part of the package, but is not meant to be
run directly (i.e. the elf(5) file is a payload, and not compiled) then
those files can be added to NO_ARCH_IGNORE to avoid the check from failing,

Changes to ports:
 - Ports that have NO_ARCH set, but actually compile files have had NO_ARCH
   removed.
 - Ports that have elf(5) payloads have had those files added to
   NO_ARCH_IGNORE.
 - R-cran ports that do not set USES=cran:compiles have NO_ARCH set,

PR:		218976
Reviewed by:	antoine, mat
Approved by:	portmgr
2.1.4
20 Dec 2016 09:56:19
Revision:428984Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: updated to version 2.1-4

 - updated comment to align with CRAN package
 - updated license to align with CRAN package
 - add new test dependencies:
   - math/R-cran-MatrixModels
   - math/R-cran-SparseM
   - math/R-cran-lme4
   - math/R-cran-nloptr
   - math/R-cran-survey
 - set NO_ARCH as port does not compile

Generated by:	portcran (0.1.3)
2.1.3
19 Nov 2016 12:57:24
Revision:426364Original commit files touched by this commit
dbn search for other commits by this committer
Convert R-cran ports to auto-plist.

These ports did not properly handle the DOCS options (in math/R).
2.1.3
15 Aug 2016 16:31:39
Revision:420249Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: update to 2.1-3.

 - Corrected documentation for mcPlots
 - added id.location argument to showLabels to vary location of labels
 - added fix for compatiblity with Rcmdr with missing data in several plotting
   functions.
 - deltaMethod() now reports confidence intervals.
 - print.summary.Anova.mlm() has new SSP and SSPE arguments to determine
   whether the corresponding matrices are printed (suggestion of Michael
   Friendly).
 - summary() and print() methods for Anova.mlm() can now report univariate
   ANOVAs (suggestion and some code by Michael Friendly).
 - added "value" and "vcov" attributes to objects returned by
   linearHypothesis() (after suggestions by Liviu Andronic and Steven Yen).
 - compareCoefs() now checks classes of models.
 - small fixes/changes.
2.1.2
01 Apr 2016 14:16:20
Revision:412348Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.

With hat:	portmgr
Sponsored by:	Absolight
2.1.2
28 Mar 2016 06:45:00
Revision:412034Original commit files touched by this commit
dbn search for other commits by this committer
math:R-cran-car: update to 2.1-2.

Changes:
 - Add lmtest and sandwich as test dependencies.

ChangeLog:
 - Modified scatter3d() so that plots can be embedded in HTML.
2.1.1
13 Feb 2016 14:13:55
Revision:408798Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: update to 2.1-1.

Changes:
 * Use explicit pkg-plist instead of autoplist.  Using an explicit pkg-plist
   is more robust against "silent" errors or changes.

ChangeLog:
 - influencePlot now returns Cook's distance, not its square root.
 - Anova() now supports "coxme" objects (produced by coxme() in coxme package)
   (request of Philipp Sprenger).
 - Anova() now works via its default method with "vglm" objects produced by
   functions in the VGAM package; and the default method of linearHypothesis()
   again works with these objects (problem reported by Michael Friendly).
 - Fixed Anova.coxph() so that it takes account of method (ties) argument (bug
   reported by Karl Ove Hufthammer).
 - Improvements to Anova.default() so that a wider variety of model classes are
   accommodated (following request of Liviu Andronic.)
 - dataEllipse() now throws an error if there are too few colors for the number
   of groups (fixing bug reported by Ottorino Pantani).
 - spreadLevelPlot.lm() now includes an optional smoother in addition to the
   fitted straight line (suggestion of Michael Friendly).
 - No longer import methods (as opposed to generics) directly from pbkrtest.
 - Added axis.ticks argument to scatter3d() (code contributed by
   David Winsemius).
2.1.0
28 Nov 2015 14:30:41
Revision:402534Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: update to 2.1-0

Changes:
 - Remove port's broken and depreciated status
 - Add two dependencies
 - Add GPLv3 as dual license
 - Update website URL

Change Log:
 - New power family called skewPower has been added that can be used with the
   Box Cox method with a few negative responses (joint work with Doug Hawkins).
   Several functions modified to accomodate two-parameter power families.
 - Fixed bug in Anova() for coxph models with clusters (reported by Jesus
   Humberto Gomez ), due apparently to a change in coxph().
 - Anova() F-tests for binomial and Poisson GLMs now changes
   error.estimate="dispersion" to "pearson" as advertized (bug reported by
   Will Petry).
 - Improved behavior of above-plot legends in scatterplot().
 - Fixed sp() (bug reported by Cesar Rabak).
 - Conforms to new CRAN requirements for package imports.

Reported by:	tota@
PR:		203418
PR:		204587
2.0.25
29 Oct 2015 17:24:01
Revision:400474Original commit files touched by this commit
tota search for other commits by this committer
- Postpone EXPIRATION_DATE to fix math/R-cran-car and
  devel/R-cran-caret
2.0.25
26 Sep 2015 21:39:11
Revision:398018Original commit files touched by this commit
antoine search for other commits by this committer
Deprecate ports broken for more than 6 months
2.0.25
28 Mar 2015 17:40:36
Revision:382529Original commit files touched by this commit
antoine search for other commits by this committer
Mark BROKEN: missing dependency

===>  Staging for R-cran-car-2.0.25
===>   Generating temporary packing list
ERROR: dependencies 'pbkrtest', 'quantreg' are not available for package 'car'

Reported by:	pkg-fallout
2.0.25
22 Mar 2015 17:05:17
Revision:381937Original commit files touched by this commit
dbn search for other commits by this committer
math/R-cran-car: update to 2.0-25.

Changes to Version 2.0-25
 * Fixed df check in linearHypothesis.default() (bug report by Pierre Chausse).
 * Fixed bug when vcov. argument to Anova() is a function (reported by Liviu
   Andronic).
 * Now export .carEnv to avoid problem with update() in Boot() (reported by
   Alan T. Arnholt).

Changes to Version 2.0-24
 * Fixed broken URLs.
 * Changed handling of .carEnv environment.
 * Moved pbkrtest, quantreg, and mgcv from Suggests: to Imports:.

Changes to Version 2.0-23
 * Modified ScatterplotSmoothers to add an 'offset' to the vertical axis of
   spread smooths.  This are required in the marginal model plot functions.
 * Fixed labels on mcPlot with overlay=FALSE
 * Check for 0 residual df and 0 residual deviance (within rounding) in Anova()
   and linearHypothesis() (problem reported by Jonathan Love).
 * Fixed model.matrix.lme and model.matrix.gls utility functions, and hence
   Anova and vif, respectively, to work with models specified with formulas
   supplied as objects (after problem noted by Gang Chen).
 * Added Wong data set, used in mixed-models appendix.
2.0.22
05 Dec 2014 12:26:36
Revision:374009Original commit files touched by this commit
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Update math/R-cran-car to 2.0-22.

Changes to Version 2.0-22
 * corrected bug in 'terms' argument in residualPlots, and other graphic
   functions with a 'terms' argument
 * added residual curvature tests for glm.nb
 * mcPlot and mcPlot draw 'marginal/conditional' plots for lm objects.  The
   marginal plot is of the centered response versus a centered regressor; the
   conditional plot is the corresponding added-variable plot.  The plots can be
   overlaid or viewed side-by-side.
 * added argument marginal.scale to avPlots to scale the added-variable plot for
   Y on X|Z using the scale from the marginal plot of Y vs X ignoring X.  The
   default is FALSE, corresponding to using scaling to maximize resolution or
   use xlim and ylim to set user scaling.
 * Fixed bugs in Anova.survreg() that could affect types II, II tests, both Wald
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2.0.21_1
10 Sep 2014 20:50:37
Revision:367888Original commit files touched by this commit
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Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
2.0.21
23 Aug 2014 17:30:43
Revision:365761Original commit files touched by this commit
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Update math/R-cran-car to 2.0-21.

ChangeLog:
 * residualPlot error when using 'type="rstudent" has been fixed.
 * Minor change to "recode" documentation; improved error checking in
    recode().
 * Fixed a bug in gamLine with non-canonical links. (Thanks to Hani Christoph)
 * Added has.intercept.multinom() to make Anova() work with multinom objects
    fit to a dichotomous response (after bug report by Kristian Hovde Liland).
 * Replaced vif.lm() with vif.default() to cover wider variety of models
    (after question by Laura Rigg about gls models).
 * Diagonal panels in scatterplotMatrix() (except for histograms) show
     groups separately when plotted by groups (suggestion by Erich Neuwirth).
 * Added vcov. argument to Anova.lm().
2.0.20
03 May 2014 09:41:29
Revision:352896Original commit files touched by this commit
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Update math/R-cran-car to 2.0-20.

ChangeLog:
 o Added new id.method="r" to showLabels for labeling plots of residuals;
   default id.method changed in residualPlots.
 o Fixed handling of labels argument to outlierTest()
   (bug report by Stephane Laurent).
 o Accommodate numeric variables consisting entirely of NAs in recode()
   (suggestion of Karl Ove Hufthammer).
 o Prevent dataEllipse() from opening a graphics device when draw=FALSE
   (fixing bug reported by Rafael Laboissiere).
 o The functions makeHypothesis() and printHypothesis(), intended for
   internal use, are exported so that they can be used in other packages
   (request of Arne Henningsen).
 o Small fixes.
2.0.19_3
10 Mar 2014 20:55:22
Revision:347809Original commit files touched by this commit
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
2.0.19_2
28 Dec 2013 10:28:41
Revision:337846Original commit files touched by this commit
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Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
2.0.19_2
27 Nov 2013 18:56:44
Revision:335044Original commit files touched by this commit
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Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
2.0.19_2
13 Nov 2013 08:19:35
Revision:333659Original commit files touched by this commit
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Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
2.0.19_1
26 Oct 2013 00:52:36
Revision:331644Original commit files touched by this commit
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Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
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2.0.19
06 Oct 2013 17:32:54
Revision:329606Original commit files touched by this commit
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Update math/R-cran-car to 2.0.19.

ChangeLog:
 * fixed scoping problems in Boot, bootCase, and ncvTest
 * added an argument to deltaMethod for passing arguments to get scoping right
when calling linearHypothesis in another function; other deltaMethod bugs fixed
 * slight modification to documentation of Boot
 * summary() method for "Anova.mlm" objects now returns an object, printed by a
corresponding print() method (adapting code contributed by Gabriel Baud-Bovy).
 * added .merMod methods to Anova(), deltaMethod(), linearHypothesis(),
matchCoefs(), and unexported utilities df.residual() and has.intercept();
insured compatibility with nlme and CRAN and developments versions of lme4.
 * added use argument to scatterplotMatrix() (suggstion of Antoine Lizee).
 * export linearHypothesis.default() for use in other packages (suggestion of
Achim Zeileis).
 * small changes and fixes.
2.0.18
20 Sep 2013 20:55:06
Revision:327746Original commit files touched by this commit
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Add NO_STAGE all over the place in preparation for the staging support (cat:
math)
2.0.18
17 Jun 2013 11:50:39
Revision:321100Original commit files touched by this commit
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Update math/R-cran-car to 2.0-18.

ChangeLog:
 o Bug fix to boot with type="residual"
 o Added densityPlot() function.

Approved by:	eadler,bdrewery (mentors, implicit)
2.0.17_1
28 May 2013 15:15:06
Revision:319316Original commit files touched by this commit
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Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
2.0.17
06 May 2013 18:10:36
Revision:317535Original commit files touched by this commit
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Update math/R-cran-car to 2.0-17.

ChangeLog:
    o Add a variable to AMSsurvey.
    o Fix to residualPlots to compute lack of fit tests with missing values and
      glms.
    o Fix to residualPlots with a 0/1 variable not declared a factor.
    o Boxplot() now works properly with at argument passed to boxplot() via ...
      (contribution of Steve Ellison).
    o qqPlot.lm() now works with "aov" objects (fixing problem reported by
      Thomas Burk).
    o Small fixes to code and docs.

Approved by:	eadler,bdrewery (mentors, implicit)
2.0.16_2
07 Mar 2013 04:21:35
Revision:313562Original commit files touched by this commit
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update math/R to 2.15.3, and adjust dependent ports
2.0.16_1
20 Feb 2013 17:49:00
Revision:312635Original commit files touched by this commit
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Update math/R-cran-car to 2.0-16.

Changes to Version 2.0-16

    o Fixed bug in printing of hypotheses by linearHypothesis(), where numeric
constants of the form 1.* or -1.* were printed incorrectly (reported by
Johannes Kutsam).

    o Fixed a bug in showLabels() with multiple groups in the scatterplot() and
scatterplotMatrix() function

    o linearHypothesisTest() now tolerates newlines and tabs in hypotheses
(suggestion of David Hugh-Jones).

    o two bugs fixed in Boot() (found by David Pain) changed argument f to f.
in bootCase().

    o summary.Boot(), confint.Boot() and hist.Boot() handle aliases correctly.

    o Boxplot.formula() now accepts more than one conditioning variable
(suggestion of Christina Yassouridis).

    o Small fixes.

Approved by:	bdrewery (mentor)
2.0.15_1
16 Jan 2013 20:15:07
Revision:310522Original commit files touched by this commit
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 - Update to my new FreeBSD address
 - Trim header
 - Add myself as creator of devel/svn2git (see r272261)

Approved by:	eadler|bdrewery (mentor)
2.0.15_1
04 Jan 2013 17:51:39
Revision:309935Original commit files touched by this commit
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update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
2.0.15
20 Oct 2012 16:19:21
Revision:306202Original commit files touched by this commit
rakuco search for other commits by this committer
Update to 2.0-15.

PR:		ports/172776
Submitted by:	David Naylor <naylor.b.david@gmail.com> (maintainer)
Feature safe:	yes
2.0.14
01 Oct 2012 09:51:16
Revision:305102Original commit files touched by this commit
wen search for other commits by this committer
- Update to 2.0-14 [1]
- Convert to new Makefile format

PR:		172136 [1]
Submitted by:	David Naylor <naylor.b.david@gmail.com> (maintainer) [1]
2.0.12_2
26 Jun 2012 23:57:00
Original commit files touched by this commit
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update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
2.0.12_1
04 May 2012 20:56:15
Original commit files touched by this commit
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- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
2.0.12
27 Mar 2012 20:08:25
Original commit files touched by this commit
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- update to 2.0-12

PR:             166437
Submitted by:   David Naylor <naylor.b.david at gmail dot com> (maintainer)
Feature safe:   yes
2.0.11_3
03 Mar 2012 16:59:36
Original commit files touched by this commit
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update math/R to 2.14.2, and adjust dependent ports
2.0.11_2
18 Jan 2012 23:04:08
Original commit files touched by this commit
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update math/R to 2.14.1, and adjust dependent ports
2.0.11_1
27 Nov 2011 07:02:15
Original commit files touched by this commit
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update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
2.0.11
15 Nov 2011 20:09:02
Original commit files touched by this commit
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- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
2.0.11
29 Oct 2011 18:20:43
Original commit files touched by this commit
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- Update to 2.0-11

PR:             ports/161918
Submitted by:   David Naylor (maintainer)
2.0.10_2
11 Oct 2011 14:19:46
Original commit files touched by this commit
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update math/R to 2.13.2, and adjust dependent ports
2.0.10_1
28 Jul 2011 04:19:58
Original commit files touched by this commit
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update R to 2.13.1 [1], and adjust dependent ports (this
includes workarounds intended to fix the broken sparc64
build, and fixes to the static libR, which is now in a
separate slave port, math/libR)

PR:             158947 [1]
Submitted by:   wen ([1], independently)
2.0.10
08 May 2011 05:11:41
Original commit files touched by this commit
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update to 2.0-10

PR:             156858
Submitted by:   David Naylor (maintainer)
1.2.16_3
07 May 2011 03:29:59
Original commit files touched by this commit
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- update to 2.13.0
- switch to the bundled Rblas and Rlapack by default (this
  can be changed by setting BLAS and LAPACK) which favors
  correctness in some corner cases over a slight performance
  penalty; this will be revisited after the blas and lapack
  updates
- replace the STATIC_LIBR option with a LIBR option (on
  by default): if on, libR.a and libR.so are installed,
  and R is linked to libR.so. Otherwise, R is static, and
  no libRs are installed.
- remove the superfluous copy of libR.so in ${LOCALBASE}/lib [1]
- enable the cairo and pango elements in the X11() graphics
  device by default, controlled by new PANGOCAIRO option
- add a few small patches to dependent ports, bumping
  PORTREVISION where necessary

PR:             153309 [1]
Approved by:    thierry (rkward*), wen (rpy*, R-cran-*)
1.2.16_2
30 Apr 2011 07:59:13
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Use DISTVERSION for CRAN ports with hyphenated versions

Approved by:    wen
1.2.16_2
20 Mar 2011 12:54:45
Original commit files touched by this commit
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- Get Rid MD5 support
1.2.16_2
28 Feb 2011 16:03:13
Original commit files touched by this commit
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- Update R to 2.12.2, a bugfix release
- Bump PORTREVISION of dependent ports,
  where necessary

Approved by:    makc, miwi (mentors, implicit)
1.2.16_1
29 Jan 2011 16:53:21
Original commit files touched by this commit
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- Update R to 2.12.1
- Bump PORTREVISION of
  dependent ports

Approved by:    makc, miwi (mentors, implicit)
                pav (portmgr)
Feature safe:   yes
1.2.16
26 Sep 2010 07:59:14
Original commit files touched by this commit
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- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk
- Rename R_MOD to USE_R_MOD to be suitable for bsd.port.mk
- Remove math/R-cran-sm/files/bsd.cran.mk to complete the moving

Approved by:    wen (via e-mail)
1.2.16
15 Aug 2010 02:48:05
Original commit files touched by this commit
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- Use R_MOD_AUTOPLIST instead of pkg-plist

Approved by:    wen
1.2.16
24 Apr 2010 07:35:44
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 1.2.16

Approved by:    maintainer(implicit)
1.2.13_4
28 Mar 2010 06:47:48
Original commit files touched by this commit
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- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
1.2.13_3
05 Feb 2010 11:46:55
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- update to jpeg-8
1.2.13_2
25 Dec 2009 14:35:38
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- Fix build after math/R update

Submitted by:   wen@, "b. f." <bf1783@googlemail.com>
1.2.13_1
16 Oct 2009 14:00:34
Original commit files touched by this commit
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- Change maintainer's email address

PR:             ports/139655
Submitted by:   David Naylor <naylor.b.david@gmail.com> (maintainer)
Approved by:    miwi(mentor)
1.2.13_1
31 Jul 2009 13:57:52
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- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
1.2.13
02 May 2009 17:33:29
Original commit files touched by this commit
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This package accompanies J. Fox, An R and S-PLUS Companion to Applied
Regression, Sage, 2002. The package contains mostly functions for applied
regression, linear models, and generalized linear models, with an emphasis on
regression diagnostics, particularly graphical diagnostic methods. There are
also some utility functions. With some exceptions, I have tried not to duplicate
capabilities in the basic distribution of R, nor in widely used packages. Where
relevant, the functions in car are consistent with na.action = na.omit or
na.exclude.

WWW:    http://cran.r-project.org/web/packages/car/index.html

PR:             ports/133708
Submitted by:   David Naylor <naylor.b.david@gmail.com>

Number of commits found: 79