| Port details |
- py-atomium Molecular modeller and file parser
- 1.0.11 science
 =0      Version of this port present on the latest quarterly branch. - Maintainer: yuri@FreeBSD.org
- Port Added: 2022-10-04 04:09:29
- Last Update: 2022-10-04 04:06:22
- Commit Hash: c8a9968
- Also Listed In: biology python
- License: MIT
- Description:
- atomium is a molecular modeller and file parser, capable of reading from and
writing to .pdb, .cif and .mmtf files.
  ¦  ¦  ¦  ¦  - pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}atomium>0:science/py-atomium@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/science/py-atomium/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-atomium
- pkg install py39-atomium
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-atomium listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-atomium
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1664851734
SHA256 (samirelanduk-atomium-v1.0.11_GH0.tar.gz) = f26fec07ab7777032e2f829e4338021543f5ccbd76f59dc47c12decc9b1ebe88
SIZE (samirelanduk-atomium-v1.0.11_GH0.tar.gz) = 21454532
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-coveralls>0 : devel/py-coveralls@py39
- py39-msgpack>=0.6.1 : devel/py-msgpack@py39
- py39-numpy>=1.16,1<1.24,1 : math/py-numpy@py39
- py39-paramiko>0 : security/py-paramiko@py39
- py39-requests>0 : www/py-requests@py39
- py39-rmsd>0 : science/py-rmsd@py39
- py39-sphinx>0 : textproc/py-sphinx@py39
- py39-sphinx_rtd_theme>0 : textproc/py-sphinx_rtd_theme@py39
- py39-tqdm>0 : misc/py-tqdm@py39
- py39-valerius>=0.2 : biology/py-valerius@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-coveralls>0 : devel/py-coveralls@py39
- py39-msgpack>=0.6.1 : devel/py-msgpack@py39
- py39-numpy>=1.16,1<1.24,1 : math/py-numpy@py39
- py39-paramiko>0 : security/py-paramiko@py39
- py39-requests>0 : www/py-requests@py39
- py39-rmsd>0 : science/py-rmsd@py39
- py39-sphinx>0 : textproc/py-sphinx@py39
- py39-sphinx_rtd_theme>0 : textproc/py-sphinx_rtd_theme@py39
- py39-tqdm>0 : misc/py-tqdm@py39
- py39-valerius>=0.2 : biology/py-valerius@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- science_py-atomium
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Notes from UPDATING |
- These upgrade notes are taken from /usr/ports/UPDATING
- 2017-11-30
Affects: */py* Author: mat@FreeBSD.org Reason:
Ports using Python via USES=python are now flavored. All the py3-* ports
have been removed and folded into their py-* master ports.
People using Poudriere 3.2+ and binary packages do not have to do anything.
For other people, to build the Python 3.6 version of, for example,
databases/py-gdbm, you need to run:
# make FLAVOR=py36 install
|
Number of commits found: 1
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
1.0.11
04 Oct 2022 04:06:22
 |
Yuri Victorovich (yuri) |
science/py-atomium: New port: Molecular modeller and file parser |
Number of commits found: 1
|
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