notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photosAll times are UTC
Ukraine
This referral link gives you 10% off a Fastmail.com account and gives me a discount on my Fastmail account.

Get notified when packages are built

A new feature has been added. FreshPorts already tracks package built by the FreeBSD project. This information is displayed on each port page. You can now get an email when FreshPorts notices a new package is available for something on one of your watch lists. However, you must opt into that. Click on Report Subscriptions on the right, and New Package Notification box, and click on Update.

Finally, under Watch Lists, click on ABI Package Subscriptions to select your ABI (e.g. FreeBSD:14:amd64) & package set (latest/quarterly) combination for a given watch list. This is what FreshPorts will look for.

Port details
libsbml API Library for Working with SBML File
5.20.2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 5.20.2Version of this port present on the latest quarterly branch.
Maintainer: sunpoet@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2009-05-28 23:36:42
Last Update: 2023-09-30 00:44:19
Commit Hash: 4c14d7a
Also Listed In: devel
License: LGPL21
WWW:
https://sbml.org/software/libsbml/
https://synonym.caltech.edu/
https://github.com/sbmlteam/libsbml
Description:
LibSBML is an open-source programming library to help you read, write, manipulate, translate, and validate SBML files and data streams. It is not an application itself (though it does come with example programs), but rather a library you can embed in your own applications. LibSBML understands all Levels and Versions of SBML, as well as the SBML Layout proposal by Gauges, Rost, Sahle and Wegner. It's written in ISO C and C++ but can be used from all the languages listed in the right-hand box.
HomepageHomepageHomepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (387 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/libsbml-5.20.2/catalog.mk
  3. /usr/local/share/licenses/libsbml-5.20.2/LICENSE
  4. /usr/local/share/licenses/libsbml-5.20.2/LGPL21
  5. include/sbml/AlgebraicRule.h
  6. include/sbml/AssignmentRule.h
  7. include/sbml/Compartment.h
  8. include/sbml/CompartmentType.h
  9. include/sbml/Constraint.h
  10. include/sbml/Delay.h
  11. include/sbml/Event.h
  12. include/sbml/EventAssignment.h
  13. include/sbml/ExpectedAttributes.h
  14. include/sbml/FunctionDefinition.h
  15. include/sbml/InitialAssignment.h
  16. include/sbml/KineticLaw.h
  17. include/sbml/ListOf.h
  18. include/sbml/LocalParameter.h
  19. include/sbml/Model.h
  20. include/sbml/ModifierSpeciesReference.h
  21. include/sbml/Parameter.h
  22. include/sbml/Priority.h
  23. include/sbml/RateRule.h
  24. include/sbml/Reaction.h
  25. include/sbml/Rule.h
  26. include/sbml/SBMLConstructorException.h
  27. include/sbml/SBMLDocument.h
  28. include/sbml/SBMLError.h
  29. include/sbml/SBMLErrorLog.h
  30. include/sbml/SBMLErrorTable.h
  31. include/sbml/SBMLNamespaces.h
  32. include/sbml/SBMLReader.h
  33. include/sbml/SBMLTransforms.h
  34. include/sbml/SBMLTypeCodes.h
  35. include/sbml/SBMLTypes.h
  36. include/sbml/SBMLVisitor.h
  37. include/sbml/SBMLWriter.h
  38. include/sbml/SBO.h
  39. include/sbml/SBase.h
  40. include/sbml/SimpleSpeciesReference.h
  41. include/sbml/Species.h
  42. include/sbml/SpeciesReference.h
  43. include/sbml/SpeciesType.h
  44. include/sbml/StoichiometryMath.h
  45. include/sbml/SyntaxChecker.h
  46. include/sbml/Trigger.h
  47. include/sbml/Unit.h
  48. include/sbml/UnitDefinition.h
  49. include/sbml/UnitKind.h
  50. include/sbml/annotation/CVTerm.h
  51. include/sbml/annotation/Date.h
  52. include/sbml/annotation/ModelCreator.h
  53. include/sbml/annotation/ModelHistory.h
  54. include/sbml/annotation/RDFAnnotation.h
  55. include/sbml/annotation/RDFAnnotationParser.h
  56. include/sbml/common/common-documentation.h
  57. include/sbml/common/common-sbmlerror-codes.h
  58. include/sbml/common/common.h
  59. include/sbml/common/extern.h
  60. include/sbml/common/libsbml-config-common.h
  61. include/sbml/common/libsbml-config-packages.h
  62. include/sbml/common/libsbml-config.h
  63. include/sbml/common/libsbml-namespace.h
  64. include/sbml/common/libsbml-package.h
  65. include/sbml/common/libsbml-version.h
  66. include/sbml/common/operationReturnValues.h
  67. include/sbml/common/sbmlfwd.h
  68. include/sbml/compress/CompressCommon.h
  69. include/sbml/compress/InputDecompressor.h
  70. include/sbml/compress/OutputCompressor.h
  71. include/sbml/compress/bzfstream.h
  72. include/sbml/compress/crypt.h
  73. include/sbml/compress/ioapi.h
  74. include/sbml/compress/ioapi_mem.h
  75. include/sbml/compress/iowin32.h
  76. include/sbml/compress/unzip.h
  77. include/sbml/compress/zfstream.h
  78. include/sbml/compress/zip.h
  79. include/sbml/compress/zipfstream.h
  80. include/sbml/conversion/ConversionOption.h
  81. include/sbml/conversion/ConversionProperties.h
  82. include/sbml/conversion/ExpressionAnalyser.h
  83. include/sbml/conversion/SBMLConverter.h
  84. include/sbml/conversion/SBMLConverterRegister.h
  85. include/sbml/conversion/SBMLConverterRegistry.h
  86. include/sbml/conversion/SBMLConverterTypes.h
  87. include/sbml/conversion/SBMLFunctionDefinitionConverter.h
  88. include/sbml/conversion/SBMLIdConverter.h
  89. include/sbml/conversion/SBMLInferUnitsConverter.h
  90. include/sbml/conversion/SBMLInitialAssignmentConverter.h
  91. include/sbml/conversion/SBMLLevel1Version1Converter.h
  92. include/sbml/conversion/SBMLLevelVersionConverter.h
  93. include/sbml/conversion/SBMLLocalParameterConverter.h
  94. include/sbml/conversion/SBMLRateOfConverter.h
  95. include/sbml/conversion/SBMLRateRuleConverter.h
  96. include/sbml/conversion/SBMLReactionConverter.h
  97. include/sbml/conversion/SBMLRuleConverter.h
  98. include/sbml/conversion/SBMLStripPackageConverter.h
  99. include/sbml/conversion/SBMLUnitsConverter.h
  100. include/sbml/extension/ASTBasePlugin.h
  101. include/sbml/extension/ISBMLExtensionNamespaces.h
  102. include/sbml/extension/RegisterExtensions.h
  103. include/sbml/extension/SBMLDocumentPlugin.h
  104. include/sbml/extension/SBMLDocumentPluginNotRequired.h
  105. include/sbml/extension/SBMLExtension.h
  106. include/sbml/extension/SBMLExtensionException.h
  107. include/sbml/extension/SBMLExtensionNamespaces.h
  108. include/sbml/extension/SBMLExtensionRegister.h
  109. include/sbml/extension/SBMLExtensionRegistry.h
  110. include/sbml/extension/SBaseExtensionPoint.h
  111. include/sbml/extension/SBasePlugin.h
  112. include/sbml/extension/SBasePluginCreator.h
  113. include/sbml/extension/SBasePluginCreatorBase.h
  114. include/sbml/math/ASTNode.h
  115. include/sbml/math/ASTNodeType.h
  116. include/sbml/math/DefinitionURLRegistry.h
  117. include/sbml/math/FormulaFormatter.h
  118. include/sbml/math/FormulaParser.h
  119. include/sbml/math/FormulaTokenizer.h
  120. include/sbml/math/L3FormulaFormatter.h
  121. include/sbml/math/L3Parser.h
  122. include/sbml/math/L3ParserSettings.h
  123. include/sbml/math/MathML.h
  124. include/sbml/packages/l3v2extendedmath/common/L3v2extendedmathExtensionTypes.h
  125. include/sbml/packages/l3v2extendedmath/common/l3v2extendedmathfwd.h
  126. include/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathASTPlugin.h
  127. include/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathExtension.h
  128. include/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.h
  129. include/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.h
  130. include/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathSBMLError.h
  131. include/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathSBMLErrorTable.h
  132. include/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.h
  133. include/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.h
  134. include/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.h
  135. include/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.h
  136. include/sbml/units/FormulaUnitsData.h
  137. include/sbml/units/UnitFormulaFormatter.h
  138. include/sbml/units/UnitKindList.h
  139. include/sbml/util/CallbackRegistry.h
  140. include/sbml/util/ElementFilter.h
  141. include/sbml/util/IdFilter.h
  142. include/sbml/util/IdList.h
  143. include/sbml/util/IdentifierTransformer.h
  144. include/sbml/util/List.h
  145. include/sbml/util/MathFilter.h
  146. include/sbml/util/MetaIdFilter.h
  147. include/sbml/util/PrefixTransformer.h
  148. include/sbml/util/Stack.h
  149. include/sbml/util/StringBuffer.h
  150. include/sbml/util/memory.h
  151. include/sbml/util/util.h
  152. include/sbml/validator/ConsistencyValidator.h
  153. include/sbml/validator/ConstraintMacros.h
  154. include/sbml/validator/IdentifierConsistencyValidator.h
  155. include/sbml/validator/InternalConsistencyValidator.h
  156. include/sbml/validator/L1CompatibilityValidator.h
  157. include/sbml/validator/L2v1CompatibilityValidator.h
  158. include/sbml/validator/L2v2CompatibilityValidator.h
  159. include/sbml/validator/L2v3CompatibilityValidator.h
  160. include/sbml/validator/L2v4CompatibilityValidator.h
  161. include/sbml/validator/L3v1CompatibilityValidator.h
  162. include/sbml/validator/L3v2CompatibilityValidator.h
  163. include/sbml/validator/MathMLConsistencyValidator.h
  164. include/sbml/validator/ModelingPracticeValidator.h
  165. include/sbml/validator/OverdeterminedValidator.h
  166. include/sbml/validator/SBMLExternalValidator.h
  167. include/sbml/validator/SBMLInternalValidator.h
  168. include/sbml/validator/SBMLValidator.h
  169. include/sbml/validator/SBOConsistencyValidator.h
  170. include/sbml/validator/StrictUnitConsistencyValidator.h
  171. include/sbml/validator/UnitConsistencyValidator.h
  172. include/sbml/validator/VConstraint.h
  173. include/sbml/validator/Validator.h
  174. include/sbml/xml/ExpatAttributes.h
  175. include/sbml/xml/ExpatHandler.h
  176. include/sbml/xml/ExpatParser.h
  177. include/sbml/xml/LibXMLAttributes.h
  178. include/sbml/xml/LibXMLHandler.h
  179. include/sbml/xml/LibXMLNamespaces.h
  180. include/sbml/xml/LibXMLParser.h
  181. include/sbml/xml/LibXMLTranscode.h
  182. include/sbml/xml/XMLAttributes.h
  183. include/sbml/xml/XMLBuffer.h
  184. include/sbml/xml/XMLConstructorException.h
  185. include/sbml/xml/XMLError.h
  186. include/sbml/xml/XMLErrorLog.h
  187. include/sbml/xml/XMLExtern.h
  188. include/sbml/xml/XMLFileBuffer.h
  189. include/sbml/xml/XMLHandler.h
  190. include/sbml/xml/XMLInputStream.h
  191. include/sbml/xml/XMLLogOverride.h
  192. include/sbml/xml/XMLMemoryBuffer.h
  193. include/sbml/xml/XMLNamespaces.h
  194. include/sbml/xml/XMLNode.h
  195. include/sbml/xml/XMLOutputStream.h
  196. include/sbml/xml/XMLParser.h
  197. include/sbml/xml/XMLToken.h
  198. include/sbml/xml/XMLTokenizer.h
  199. include/sbml/xml/XMLTriple.h
  200. include/sbml/xml/XercesAttributes.h
  201. include/sbml/xml/XercesHandler.h
  202. include/sbml/xml/XercesNamespaces.h
  203. include/sbml/xml/XercesParser.h
  204. include/sbml/xml/XercesTranscode.h
  205. lib/cmake/sbml-config-version.cmake
  206. lib/cmake/sbml-config.cmake
  207. lib/cmake/sbml-static-config-version.cmake
  208. lib/cmake/sbml-static-config.cmake
  209. lib/cmake/sbml-static-targets-release.cmake
  210. lib/cmake/sbml-static-targets.cmake
  211. lib/cmake/sbml-targets-release.cmake
  212. lib/cmake/sbml-targets.cmake
  213. lib/libsbml-static.a
  214. lib/libsbml.so
  215. lib/libsbml.so.5
  216. lib/libsbml.so.5.20.2
  217. lib/python3.9/site-packages/libsbml.pth
  218. lib/python3.9/site-packages/libsbml/_libsbml.so
  219. lib/python3.9/site-packages/libsbml/libsbml.py
  220. @comment %%RUBY_SITEARCHLIBDIR%%/libSBML.so
  221. libdata/pkgconfig/libsbml.pc
  222. @comment share/cmake/Modules/FindBZ2.cmake
  223. @comment share/cmake/Modules/FindCHECK.cmake
  224. @comment share/cmake/Modules/FindEXPAT.cmake
  225. share/cmake/Modules/FindLIBSBML.cmake
  226. @comment share/cmake/Modules/FindLIBXML.cmake
  227. @comment share/cmake/Modules/FindXERCES.cmake
  228. @comment share/cmake/Modules/FindZLIB.cmake
  229. share/examples/libsbml/README.txt
  230. share/examples/libsbml/c++/addCVTerms.cpp
  231. share/examples/libsbml/c++/addCustomValidator.cpp
  232. share/examples/libsbml/c++/addModelHistory.cpp
  233. share/examples/libsbml/c++/addingEvidenceCodes_1.cpp
  234. share/examples/libsbml/c++/addingEvidenceCodes_2.cpp
  235. share/examples/libsbml/c++/appendAnnotation.cpp
  236. share/examples/libsbml/c++/callExternalValidator.cpp
  237. share/examples/libsbml/c++/convertReactions.cpp
  238. share/examples/libsbml/c++/convertSBML.cpp
  239. share/examples/libsbml/c++/convertToL1V1.cpp
  240. share/examples/libsbml/c++/createExampleSBML.cpp
  241. share/examples/libsbml/c++/echoSBML.cpp
  242. share/examples/libsbml/c++/getAllElementsWithNotes.cpp
  243. share/examples/libsbml/c++/inferUnits.cpp
  244. share/examples/libsbml/c++/inlineFunctionDefintions.cpp
  245. share/examples/libsbml/c++/printAnnotation.cpp
  246. share/examples/libsbml/c++/printMath.cpp
  247. share/examples/libsbml/c++/printNotes.cpp
  248. share/examples/libsbml/c++/printRegisteredPackages.cpp
  249. share/examples/libsbml/c++/printSBML.cpp
  250. share/examples/libsbml/c++/printSupported.cpp
  251. share/examples/libsbml/c++/printUnits.cpp
  252. share/examples/libsbml/c++/promoteParameters.cpp
  253. share/examples/libsbml/c++/readSBML.cpp
  254. share/examples/libsbml/c++/renameSId.cpp
  255. share/examples/libsbml/c++/rngvalidator.cpp
  256. share/examples/libsbml/c++/setAnnotation.cpp
  257. share/examples/libsbml/c++/setIdFromNames.cpp
  258. share/examples/libsbml/c++/setNamesFromIds.cpp
  259. share/examples/libsbml/c++/stripPackage.cpp
  260. share/examples/libsbml/c++/translateL3Math.cpp
  261. share/examples/libsbml/c++/translateMath.cpp
  262. share/examples/libsbml/c++/unsetAnnotation.cpp
  263. share/examples/libsbml/c++/unsetNotes.cpp
  264. share/examples/libsbml/c++/util.c
  265. share/examples/libsbml/c++/util.h
  266. share/examples/libsbml/c++/validateSBML.cpp
  267. share/examples/libsbml/c/FormulaGraphvizFormatter.h
  268. share/examples/libsbml/c/addCVTerms.c
  269. share/examples/libsbml/c/addModelHistory.c
  270. share/examples/libsbml/c/addingEvidenceCodes_1.c
  271. share/examples/libsbml/c/addingEvidenceCodes_2.c
  272. share/examples/libsbml/c/appendAnnotation.c
  273. share/examples/libsbml/c/convertSBML.c
  274. share/examples/libsbml/c/createExampleSBML.c
  275. share/examples/libsbml/c/drawMath.c
  276. share/examples/libsbml/c/echoSBML.c
  277. share/examples/libsbml/c/evaluateMath.c
  278. share/examples/libsbml/c/printAnnotation.c
  279. share/examples/libsbml/c/printMath.c
  280. share/examples/libsbml/c/printNotes.c
  281. share/examples/libsbml/c/printRegisteredPackages.c
  282. share/examples/libsbml/c/printSBML.c
  283. share/examples/libsbml/c/printSupported.c
  284. share/examples/libsbml/c/printUnits.c
  285. share/examples/libsbml/c/promoteParameters.c
  286. share/examples/libsbml/c/readSBML.c
  287. share/examples/libsbml/c/stripPackage.c
  288. share/examples/libsbml/c/translateL3Math.c
  289. share/examples/libsbml/c/translateMath.c
  290. share/examples/libsbml/c/unsetAnnotation.c
  291. share/examples/libsbml/c/unsetNotes.c
  292. share/examples/libsbml/c/util.c
  293. share/examples/libsbml/c/util.h
  294. share/examples/libsbml/c/validateSBML.c
  295. share/examples/libsbml/python/addCVTerms.py
  296. share/examples/libsbml/python/addCustomValidator.py
  297. share/examples/libsbml/python/addModelHistory.py
  298. share/examples/libsbml/python/add_function_definition.py
  299. share/examples/libsbml/python/addingEvidenceCodes_1.py
  300. share/examples/libsbml/python/addingEvidenceCodes_2.py
  301. share/examples/libsbml/python/appendAnnotation.py
  302. share/examples/libsbml/python/append_to_note.py
  303. share/examples/libsbml/python/callExternalValidator.py
  304. share/examples/libsbml/python/convertSBML.py
  305. share/examples/libsbml/python/createExampleSBML.py
  306. share/examples/libsbml/python/createSimpleModel.py
  307. share/examples/libsbml/python/echoSBML.py
  308. share/examples/libsbml/python/evaluateCustomMath.py
  309. share/examples/libsbml/python/getAllElementsWithNotes.py
  310. share/examples/libsbml/python/inlineFunctionDefinitions.py
  311. share/examples/libsbml/python/inlineInitialAssignments.py
  312. share/examples/libsbml/python/printAnnotation.py
  313. share/examples/libsbml/python/printMath.py
  314. share/examples/libsbml/python/printNotes.py
  315. share/examples/libsbml/python/printRegisteredPackages.py
  316. share/examples/libsbml/python/printSBML.py
  317. share/examples/libsbml/python/printUnits.py
  318. share/examples/libsbml/python/printsupported.py
  319. share/examples/libsbml/python/promoteParameters.py
  320. share/examples/libsbml/python/readSBML.py
  321. share/examples/libsbml/python/renameSId.py
  322. share/examples/libsbml/python/replaceOneFD.py
  323. share/examples/libsbml/python/setIdFromNames.py
  324. share/examples/libsbml/python/setNamesFromIds.py
  325. share/examples/libsbml/python/stringInput.py
  326. share/examples/libsbml/python/stripPackage.py
  327. share/examples/libsbml/python/translateMath.py
  328. share/examples/libsbml/python/unsetAnnotation.py
  329. share/examples/libsbml/python/unsetNotes.py
  330. share/examples/libsbml/python/validateSBML.py
  331. share/examples/libsbml/python/validateSBMLWithCallback.py
  332. @comment share/examples/libsbml/ruby/addCVTerms.rb
  333. @comment share/examples/libsbml/ruby/addCustomValidator.rb
  334. @comment share/examples/libsbml/ruby/addModelHistory.rb
  335. @comment share/examples/libsbml/ruby/addingEvidenceCodes_1.rb
  336. @comment share/examples/libsbml/ruby/addingEvidenceCodes_2.rb
  337. @comment share/examples/libsbml/ruby/appendAnnotation.rb
  338. @comment share/examples/libsbml/ruby/callExternalValidator.rb
  339. @comment share/examples/libsbml/ruby/convertSBML.rb
  340. @comment share/examples/libsbml/ruby/createExampleSBML.rb
  341. @comment share/examples/libsbml/ruby/echoSBML.rb
  342. @comment share/examples/libsbml/ruby/printAnnotation.rb
  343. @comment share/examples/libsbml/ruby/printMath.rb
  344. @comment share/examples/libsbml/ruby/printNotes.rb
  345. @comment share/examples/libsbml/ruby/printRegisteredPackages.rb
  346. @comment share/examples/libsbml/ruby/printSBML.rb
  347. @comment share/examples/libsbml/ruby/printUnits.rb
  348. @comment share/examples/libsbml/ruby/printsupported.rb
  349. @comment share/examples/libsbml/ruby/promoteParameters.rb
  350. @comment share/examples/libsbml/ruby/readSBML.rb
  351. @comment share/examples/libsbml/ruby/stripPackage.rb
  352. @comment share/examples/libsbml/ruby/translateMath.rb
  353. @comment share/examples/libsbml/ruby/unsetAnnotation.rb
  354. @comment share/examples/libsbml/ruby/unsetNotes.rb
  355. @comment share/examples/libsbml/ruby/validateSBML.rb
  356. share/examples/libsbml/sample-models/from-spec/level-2/algebraicrules.xml
  357. share/examples/libsbml/sample-models/from-spec/level-2/assignmentrules.xml
  358. share/examples/libsbml/sample-models/from-spec/level-2/boundarycondition.xml
  359. share/examples/libsbml/sample-models/from-spec/level-2/delay.xml
  360. share/examples/libsbml/sample-models/from-spec/level-2/dimerization.xml
  361. share/examples/libsbml/sample-models/from-spec/level-2/enzymekinetics.xml
  362. share/examples/libsbml/sample-models/from-spec/level-2/events.xml
  363. share/examples/libsbml/sample-models/from-spec/level-2/functiondef.xml
  364. share/examples/libsbml/sample-models/from-spec/level-2/multicomp.xml
  365. share/examples/libsbml/sample-models/from-spec/level-2/overdetermined.xml
  366. share/examples/libsbml/sample-models/from-spec/level-2/twodimensional.xml
  367. share/examples/libsbml/sample-models/from-spec/level-2/units.xml
  368. share/examples/libsbml/sample-models/from-spec/level-3/algebraicrules.xml
  369. share/examples/libsbml/sample-models/from-spec/level-3/assignmentrules.xml
  370. share/examples/libsbml/sample-models/from-spec/level-3/boundarycondition.xml
  371. share/examples/libsbml/sample-models/from-spec/level-3/conversionfactor1.xml
  372. share/examples/libsbml/sample-models/from-spec/level-3/conversionfactor2.xml
  373. share/examples/libsbml/sample-models/from-spec/level-3/delay.xml
  374. share/examples/libsbml/sample-models/from-spec/level-3/dimerization.xml
  375. share/examples/libsbml/sample-models/from-spec/level-3/enzymekineticext.xml
  376. share/examples/libsbml/sample-models/from-spec/level-3/enzymekinetics.xml
  377. share/examples/libsbml/sample-models/from-spec/level-3/events.xml
  378. share/examples/libsbml/sample-models/from-spec/level-3/fullydeterminedevent.xml
  379. share/examples/libsbml/sample-models/from-spec/level-3/functiondef.xml
  380. share/examples/libsbml/sample-models/from-spec/level-3/membrane.xml
  381. share/examples/libsbml/sample-models/from-spec/level-3/multicomp.xml
  382. share/examples/libsbml/sample-models/from-spec/level-3/overdetermined.xml
  383. share/examples/libsbml/sample-models/from-spec/level-3/twoalgebraicrules.xml
  384. share/examples/libsbml/sample-models/from-spec/level-3/twodimensional.xml
  385. @owner
  386. @group
  387. @mode
Collapse this list.
Dependency lines:
  • libsbml>0:biology/libsbml
To install the port:
cd /usr/ports/biology/libsbml/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/libsbml
  • pkg install libsbml
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: libsbml
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1696001262 SHA256 (sbmlteam-libsbml-v5.20.2_GH0.tar.gz) = a196cab964b0b41164d4118ef20523696510bbfd264a029df00091305a1af540 SIZE (sbmlteam-libsbml-v5.20.2_GH0.tar.gz) = 28799745

Packages (timestamps in pop-ups are UTC):
libsbml
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest5.20.25.20.25.19.05.20.25.20.2-5.19.0-
FreeBSD:13:quarterly5.20.25.20.25.20.05.20.25.20.25.20.25.20.25.20.2
FreeBSD:14:latest5.20.25.20.25.19.0_25.20.25.20.25.20.0-5.20.0
FreeBSD:14:quarterly5.20.25.20.2-5.20.25.20.25.20.25.20.25.20.2
FreeBSD:15:latest5.20.25.20.2n/a5.20.2n/a5.20.25.20.25.20.2
FreeBSD:15:quarterly--n/a-n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. swig : devel/swig
  2. cmake : devel/cmake-core
  3. ninja : devel/ninja
  4. python3.9 : lang/python39
Test dependencies:
  1. python3.9 : lang/python39
Runtime dependencies:
  1. python3.9 : lang/python39
Library dependencies:
  1. libxml2.so : textproc/libxml2
This port is required by:
for Build
  1. biology/libsedml
for Libraries
  1. biology/libcombine
  2. biology/libnuml
  3. biology/py-libsedml

Deleted ports which required this port:

Expand this list of 1 deleted port
  1. science/MOOSE-neural-simulator*
  2. Collapse this list of deleted ports.
for Run
  1. biology/libsedml

Configuration Options:
===> The following configuration options are available for libsbml-5.20.2: EXAMPLES=on: Build and/or install examples PYTHON=on: Python bindings or support RUBY=off: Ruby bindings or support ====> XML format or parser support: you have to select exactly one of them EXPAT=off: XML parser support via Expat LIBXML2=on: XML parser support via libxml2 XERCES=off: XML parser support via Xerces ===> Use 'make config' to modify these settings
Options name:
biology_libsbml
USES:
cmake:testing iconv:build pathfix gnome python
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/sbmlteam/libsbml/tar.gz/v5.20.2?dummy=/
Collapse this list.

Number of commits found: 62

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
5.20.2
30 Sep 2023 00:44:19
commit hash: 4c14d7a2906c34afae0f027cb8cea0e9887ee1cdcommit hash: 4c14d7a2906c34afae0f027cb8cea0e9887ee1cdcommit hash: 4c14d7a2906c34afae0f027cb8cea0e9887ee1cdcommit hash: 4c14d7a2906c34afae0f027cb8cea0e9887ee1cd files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Update to 5.20.2

Changes:	https://github.com/sbmlteam/libsbml/releases
5.20.0
27 Jun 2023 19:34:34
commit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacb files touched by this commit
Rene Ladan (rene) search for other commits by this committer
all: remove explicit versions in USES=python for "3.x+"

The logic in USES=python will automatically convert this to 3.8+ by
itself.

Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.

finance/quickfix: mark BROKEN with PYTHON

libtool: compile:  c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp  -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
          ^~~~~~~~~~
1 warning and 1 error generated.

Reviewed by:	portmgr, vishwin, yuri
Differential Revision:	<https://reviews.freebsd.org/D40568>
5.20.0
27 May 2023 04:07:11
commit hash: f98de8beb06429de26f80be627eb78e0044bc826commit hash: f98de8beb06429de26f80be627eb78e0044bc826commit hash: f98de8beb06429de26f80be627eb78e0044bc826commit hash: f98de8beb06429de26f80be627eb78e0044bc826 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Update to 5.20.0

- Update MASTER_SITES
- Update WWW
- Sort PLIST

Changes:	https://github.com/sbmlteam/libsbml/releases
5.19.0_2
05 Apr 2023 17:29:43
commit hash: 02db5c97dd424987eadde97589b7cda8c0d6a9b5commit hash: 02db5c97dd424987eadde97589b7cda8c0d6a9b5commit hash: 02db5c97dd424987eadde97589b7cda8c0d6a9b5commit hash: 02db5c97dd424987eadde97589b7cda8c0d6a9b5 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Update WWW and clean up pkg-descr
5.19.0_2
18 Jan 2023 14:47:24
commit hash: 4dc157dfe6f75964c1dab1fbe92f3768ef539b74commit hash: 4dc157dfe6f75964c1dab1fbe92f3768ef539b74commit hash: 4dc157dfe6f75964c1dab1fbe92f3768ef539b74commit hash: 4dc157dfe6f75964c1dab1fbe92f3768ef539b74 files touched by this commit
Dima Panov (fluffy) search for other commits by this committer
biology/libsbml: unbreak build after 18c6e1827669 (+)

Changes in framework need adjustment for declared options.

*_USE=ruby now became as *_USES=ruby

Approved by:	portmgr blanket
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
5.19.0_2
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
5.19.0_2
20 Jul 2022 14:20:57
commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671 files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
biology: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Akinori MUSHA aka knu <knu@idaemons.org>
  *  Andrey Zakhvatov
  *  Bob Zimmermann <rpz@cse.wustl.edu>
  *  Camson Huynh <chuynh@biolateral.com.au>
  *  Dan Siercks <dsiercks@uwm.edu>
  *  Fernan Aguero <fernan@iib.unsam.edu.ar>
  *  Hannes Hauswedell <h2+fbsdports@fsfe.org>
  *  J. Bacon <jwb@FreeBSD.org>
  *  Jason Bacon <jwb@FreeBSD.org>
  *  Jeremy <karlj000@unbc.ca>
(Only the first 15 lines of the commit message are shown above View all of this commit message)
5.19.0_2
10 Apr 2022 19:11:41
commit hash: d63665f7cd9c99880704a3c5bc221829cb009744commit hash: d63665f7cd9c99880704a3c5bc221829cb009744commit hash: d63665f7cd9c99880704a3c5bc221829cb009744commit hash: d63665f7cd9c99880704a3c5bc221829cb009744 files touched by this commit
Charlie Li (vishwin) search for other commits by this committer
textproc/libxml2: bump all LIB_DEPENDS consumers

This is a separate commit to facilitate easier cherry-picking for
quarterly.

PR: 262853, 262940, 262877, 263126
Approved by: fluffy (mentor)
5.19.0_1
26 Mar 2022 08:27:27
commit hash: 247c7db7513f1264922428278678da641c5a3f52commit hash: 247c7db7513f1264922428278678da641c5a3f52commit hash: 247c7db7513f1264922428278678da641c5a3f52commit hash: 247c7db7513f1264922428278678da641c5a3f52 files touched by this commit
Matthias Fechner (mfechner) search for other commits by this committer
textproc/libxml2: bump all dependencies

This should make sure that all dependent ports will pick
up the new version commited with a13ec21cd733f67a9fc0dc00ab45268bdc236246
5.19.0
28 Feb 2022 12:45:56
commit hash: 5412e0a5e4e48da792219d0005f9610cb456a3c2commit hash: 5412e0a5e4e48da792219d0005f9610cb456a3c2commit hash: 5412e0a5e4e48da792219d0005f9610cb456a3c2commit hash: 5412e0a5e4e48da792219d0005f9610cb456a3c2 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Update WWW
5.19.0
01 Nov 2021 21:28:40
commit hash: 8ad9338b22e7ee14b690dfedfe5ad6c248c68dbfcommit hash: 8ad9338b22e7ee14b690dfedfe5ad6c248c68dbfcommit hash: 8ad9338b22e7ee14b690dfedfe5ad6c248c68dbfcommit hash: 8ad9338b22e7ee14b690dfedfe5ad6c248c68dbf files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Fix build with Python 3.10

Obtained
from:	https://github.com/sbmlteam/libsbml/commit/4f01a15fde1d8afa9eaffb4c13dfc83a3404f183
(based on)
5.19.0
01 Nov 2021 15:28:24
commit hash: 893daf4fbc25cef09586e7c9389ae47f70488de8commit hash: 893daf4fbc25cef09586e7c9389ae47f70488de8commit hash: 893daf4fbc25cef09586e7c9389ae47f70488de8commit hash: 893daf4fbc25cef09586e7c9389ae47f70488de8 files touched by this commit
Dmitry Marakasov (amdmi3) search for other commits by this committer
biology/libsbml: limit supported python versions

  File
"/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.19.0/src/bindings/python/doc-converter/rewrite_pydoc.py",
line 121, in <module>
    from formatter import NullWriter, AbstractFormatter
ModuleNotFoundError: No module named 'formatter'

Approved by:	portmgr blanket
5.19.0
11 May 2021 21:46:56
commit hash: f747a647a1b2e026440908ad4a4070178db31c89commit hash: f747a647a1b2e026440908ad4a4070178db31c89commit hash: f747a647a1b2e026440908ad4a4070178db31c89commit hash: f747a647a1b2e026440908ad4a4070178db31c89 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
biology/libsbml: Rename LIBXML option to LIBXML2
5.19.0
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
5.19.0
20 Dec 2020 15:23:50
Revision:558745Original commit files touched by this commit
sunpoet search for other commits by this committer
Set CMAKE options explicitly
5.19.0
19 Dec 2020 20:05:56
Revision:558491Original commit files touched by this commit
sunpoet search for other commits by this committer
Add EXPAT, LIBXML and XERCES options

It allows choosing XML parser library.
5.19.0
10 Dec 2020 21:30:19
Revision:557486Original commit files touched by this commit
sunpoet search for other commits by this committer
Update to 5.19.0

Changes:	https://github.com/sbmlteam/libsbml/releases
5.18.0
29 Sep 2020 18:23:05
Revision:550609Original commit files touched by this commit
sunpoet search for other commits by this committer
Convert REINPLACE_CMD to patch file
5.18.0
27 Sep 2020 19:30:20
Revision:550299Original commit files touched by this commit
sunpoet search for other commits by this committer
Update PYTHON option to use Python 3
5.18.0
17 Jun 2020 18:17:45
Revision:539491Original commit files touched by this commit
sunpoet search for other commits by this committer
Move devel/swig30 to devel/swig and update to 4.0.1

- Do not silence installation message
- Update dependent ports:
  - Fix build with swig 4.0.1
  - Update *_DEPENDS
  - Remove BINARY_ALIAS

Changes:	http://www.swig.org/news.php
PR:		246613
Exp-run by:	antoine
5.18.0
08 Feb 2020 19:01:40
Revision:525568Original commit files touched by this commit
sunpoet search for other commits by this committer
Clean up Makefile
5.18.0
22 Jun 2019 21:48:14
Revision:504890Original commit files touched by this commit
sunpoet search for other commits by this committer
Use USES=pathfix

- Add USES=gnome
- Use = instead of += for PLIST_SUB
- Use CMAKE_BOOL
- Cosmetic change
- Take maintainership
5.18.0
20 May 2019 09:12:42
Revision:502097Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.18.0
5.17.0
25 Dec 2018 20:25:40
Revision:488341Original commit files touched by this commit
tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
5.17.0
25 Aug 2018 03:31:43
Revision:477994Original commit files touched by this commit
tobik search for other commits by this committer
biology/libsbml: Fix build with Clang 6

In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/Model.cpp:41:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBMLDocument.h:298:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBMLTransforms.h:48:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/FunctionDefinition.h:129:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBO.h:207:
/usr/include/c++/v1/map:629:15: error: object of type
'std::__1::pair<std::__1::pair<const std::__1::basic_string<char>, int>,
FormulaUnitsData *>' cannot be assigned because its copy assignment operator is
implicitly deleted
        {__nc = __v.__cc; return *this;}
              ^

http://beefy11.nyi.freebsd.org/data/head-i386-default/p477696_s338122/logs/errors/libsbml-5.17.0.log
5.17.0
24 Aug 2018 06:24:31
Revision:477936Original commit files touched by this commit
linimon search for other commits by this committer
Mark as broken with clang6 after r473289.
5.17.0
25 Jun 2018 01:37:52
Revision:473289Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.17.0
5.16.0
01 Jan 2018 08:24:54
Revision:457754Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.16.0
5.15.0
20 Dec 2017 19:34:12
Revision:456845Original commit files touched by this commit
bapt search for other commits by this committer
Switch from swig 2.0 to swig 3.0
5.15.0
30 Nov 2017 15:50:34
Revision:455210Original commit files touched by this commit Sanity Test Failure
mat search for other commits by this committer
Convert Python ports to FLAVORS.

  Ports using USE_PYTHON=distutils are now flavored.  They will
  automatically get flavors (py27, py34, py35, py36) depending on what
  versions they support.

  There is also a USE_PYTHON=flavors for ports that do not use distutils
  but need FLAVORS to be set.  A USE_PYTHON=noflavors can be set if
  using distutils but flavors are not wanted.

  A new USE_PYTHON=optsuffix that will add PYTHON_PKGNAMESUFFIX has been
  added to cope with Python ports that did not have the Python
  PKGNAMEPREFIX but are flavored.

  USES=python now also exports a PY_FLAVOR variable that contains the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
5.15.0
18 May 2017 02:22:18
Revision:441126Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.15.0
5.13.0
02 Nov 2016 22:45:14
Revision:425174Original commit files touched by this commit
mat search for other commits by this committer
Cleanup no longer needed CHMOD usage after r424898.

PR:		213743
Submitted by:	mat
Exp-run by:	antoine
Sponsored by:	Absolight
5.13.0
16 Apr 2016 01:54:15
Revision:413410Original commit files touched by this commit
mi search for other commits by this committer
Upgrade from 5.12.0 to 5.13.0. Release-announcement available here:

	https://groups.google.com/forum/#!topic/sbml-discuss/OEq_49c_X78

Notified by:	portscout
5.12.0
01 Apr 2016 13:29:17
Revision:412344Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
5.12.0
27 Mar 2016 07:09:34
Revision:411978Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.12.0
5.11.4_1
14 Oct 2015 23:51:20
Revision:399316Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Add LICENSE_FILE
- Switch to options helpers
5.11.4_1
25 Aug 2015 13:15:17
Revision:395248Original commit files touched by this commit
rakuco search for other commits by this committer
Switch to USES=iconv:build.

The port does not use iconv on its own, the only dependency comes via
libxml2, which has one header that includes iconv.h.
5.11.4
12 May 2015 08:58:14
Revision:386129Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.11.4
5.11.0
04 Jan 2015 08:23:24
Revision:376179Original commit files touched by this commit
mva search for other commits by this committer
- Convert USE_PYTHON -> USES leftovers missed in the previous commits

Spotted by:	antoine
With hat:	python
5.11.0
30 Dec 2014 12:57:54
Revision:375831Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.11.0

PR:		196377
Submitted by:	koue@chaosophia.net
5.10.2
20 Oct 2014 07:10:48
Revision:371237Original commit files touched by this commit
bapt search for other commits by this committer
Cleanup plist
5.10.2
10 Aug 2014 06:21:54
Revision:364504Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.10.2

PR:		192198
Submitted by:	tkato432@yahoo.com
5.10.0
09 Aug 2014 15:44:28
Revision:364450Original commit files touched by this commit
mva search for other commits by this committer
Convert the Python framework bits to USES=python.

Please use USES=python instead of USE_PYTHON.

  USE_PYTHON=yes becomes USES=python
  USE_PYTHON=2.7+ becomes USES=python:2.7+
  USE_PYTHON_BUILD=3.3 becomes USES=python:3.3,build
  ...

A new PYTHON_FEATURES variable was added, which enables certain features for a
port and replaces some knobs at the same time;

  PYTHON_FEATURES=distutils replaces USE_PYDISTUTILS
  PYTHON_FEATURES=autoplist replaces PYDISTUTILS_AUTOPLIST
  PYTHON_FEATURES=py3kplist replaces PYTHON_PY3K_PLIST_HACK
(Only the first 15 lines of the commit message are shown above View all of this commit message)
5.10.0
13 May 2014 07:04:17
Revision:353921Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.10.0
5.9.0
13 May 2014 02:46:25
Revision:353913Original commit files touched by this commit
wen search for other commits by this committer
- Update to 5.9.0 [1]
- Stage support [1]
- Add LICENSE [1]
- Reset maintainer to port@

PR:		188554 [1]
Submitted by:	Muhammad Moinur Rahman <5u623l20@gmail.com> [1]
4.2.0_1
16 Apr 2014 18:28:50
Revision:351411Original commit files touched by this commit
zeising search for other commits by this committer
The FreeBSD x11@ and graphics team proudly presents
a zeising, kwm production, with help from dumbbell, bdrewery:

NEW XORG ON FREEBSD 9-STABLE AND 10-STABLE

This update switches over to use the new xorg stack by default on FreeBSD 9
and 10 stable, on osversions where vt(9) is available.
It is still possible to use the old stack by specifying WITHOUT_NEW_XORG in
/etc/make.conf .
FreeBSD 8-STABLE and released versions of FreeBSD still use
the old version.
A package repository with binary packages for new xorg will
be available soon.

This patch also contains updates of libxcb and related ports, pixman, as well
(Only the first 15 lines of the commit message are shown above View all of this commit message)
4.2.0
07 Mar 2014 15:52:40
Revision:347402Original commit files touched by this commit
bapt search for other commits by this committer
Convert b* to USES=zip
4.2.0
15 Jan 2014 22:50:51
Revision:339844Original commit files touched by this commit
bapt search for other commits by this committer
Reduce over inclusion of bsd.port.mk
4.2.0
11 Dec 2013 14:43:51
Revision:336171Original commit files touched by this commit
bapt search for other commits by this committer
In preparation for making libtool generate libraries with a sane name, fix all
LIB_DEPENDS in biology
4.2.0
01 Dec 2013 01:58:32
Revision:335360Original commit files touched by this commit
wen search for other commits by this committer
- Fix build on head
4.2.0
10 Oct 2013 18:08:34
Revision:330025Original commit files touched by this commit
tabthorpe search for other commits by this committer
- Switch to build with lang/ruby19
- No PORTREVISION bump, option is off by default

With hat:	portmgr
4.2.0
20 Sep 2013 15:55:44
Revision:327709Original commit files touched by this commit
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
4.2.0
18 Mar 2013 06:50:13
Revision:314530Original commit files touched by this commit
jgh search for other commits by this committer
- adoption of optionsNG
- trim historical header
- tighten COMMENT

Approved by:	portmgr (miwi)
4.2.0
19 Mar 2011 12:38:54
Original commit files touched by this commit
miwi search for other commits by this committer
- Get Rid MD5 support
4.2.0
08 Oct 2010 02:06:53
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 4.2.0
4.1.0
16 Sep 2010 03:31:29
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 4.1.0
4.0.1
24 May 2010 07:19:35
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 4.0.1
4.0.0
20 Nov 2009 22:53:09
Original commit files touched by this commit
pav search for other commits by this committer
- Mark MAKE_JOBS_UNSAFE

Reported by:    pointyhat
4.0.0
23 Sep 2009 01:06:29
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 4.0.0
- Update my mail address to FreeBSD

PR:             ports/137652
Submitted by:   wenheping@gmail.com(myself)
Approved by:    miwi(mentor)
Feature safe:   yes
3.3.2
22 Aug 2009 00:15:15
Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Switch SourceForge ports to the new File Release System: categories starting
with B,C
3.3.2
28 May 2009 23:36:10
Original commit files touched by this commit
miwi search for other commits by this committer
LibSBML is an open-source programming library to help you read, write,
manipulate, translate, and validate SBML files and data streams. It is
not an application itself (though it does come with example programs),
but rather a library you can embed in your own applications.

LibSBML understands all Levels and Versions of SBML, as well as the
SBML Layout proposal by Gauges, Rost, Sahle and Wegner. It's written in
ISO C and C++ but can be used from all the languages listed in the
right-hand box.

WWW: http://www.sbml.org/

PR:             ports/135022
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 62