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non port: science/Makefile
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Number of commits found: 441 (showing only 100 on this page)

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Mon, 31 Dec 2018
[ 17:55 rene ] Original commit   Revision:488807
488807 MOVED
488807 accessibility/Makefile
488807 accessibility/jovie-kde4
488807 accessibility/kaccessible-kde4
488807 accessibility/kdeaccessibility-kde4
488807 accessibility/kmag-kde4
488807 accessibility/kmousetool-kde4
488807 accessibility/kmouth-kde4
488807 arabic/Makefile
488807 arabic/kde4-l10n

(Only the first 10 of 381 ports in this commit are shown above. View all ports for this commit)
Remove KDE4, part 5
2018-12-31 korean/kde4-l10n: KDE4 is EOL upstream
2018-12-31 net/kget-kde4: KDE4 is EOL upstream
2018-12-31 net/kdenetwork-strigi-analyzers-kde4: KDE4 is EOL upstream
2018-12-31 net/zeroconf-ioslave-kde4: KDE4 is EOL upstream
2018-12-31 net/libkfbapi: Qt4 has been EOL since december 2015
2018-12-31 net/kdenetwork-kde4: KDE4 is EOL upstream
2018-12-31 net/kwooty: Qt4 has been EOL since december 2015
2018-12-31 net/kdenetwork-filesharing-kde4: KDE4 is EOL upstream
2018-12-31 net/libmediawiki-kde4: KDE4 is EOL upstream
2018-12-31 net/kio-upnp-ms: Qt4 has been EOL since december 2015
2018-12-31 net/libkvkontakte-kde4: KDE4 is EOL upstream
2018-12-31 net/krfb-kde4: KDE4 is EOL upstream
2018-12-31 net/smb4k-kde4: Qt4 has been EOL since december 2015
2018-12-31 net/krdc-kde4: KDE4 is EOL upstream
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Sun, 23 Dec 2018
[ 21:40 makc ] Original commit   Revision:488244
488244 science/Makefile
488244 science/scidavis
488244 science/scidavis/Makefile
488244 science/scidavis/distinfo
488244 science/scidavis/files
488244 science/scidavis/files/patch-config.pri
488244 science/scidavis/files/patch-libscidavis_python.pri
488244 science/scidavis/files/patch-libscidavis_src_ApplicationWindow.cpp
488244 science/scidavis/files/patch-libscidavis_src_future_table_TableModel.cpp
488244 science/scidavis/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
Add new port science/scidavis:

Cross-platform program for data analysis and visualization.

WWW: http://scidavis.sourceforge.net
Fri, 21 Dec 2018
[ 07:07 yuri ] Original commit   Revision:487954
487954 science/Makefile
487954 science/vipster
487954 science/vipster/Makefile
487954 science/vipster/distinfo
487954 science/vipster/files
487954 science/vipster/files/patch-libvipster_configfile.h
487954 science/vipster/pkg-descr
487954 science/vipster/pkg-plist
New port: science/vipster: Crystalline and molecular structure visualisation
program
Thu, 20 Dec 2018
[ 05:28 yuri ] Original commit   Revision:487841
487841 science/Makefile
487841 science/agrum
487841 science/agrum/Makefile
487841 science/agrum/distinfo
487841 science/agrum/pkg-descr
487841 science/agrum/pkg-plist
New port: science/agrum: Graphical modeler for Bayesian networks, influence
diagrams, etc
Wed, 19 Dec 2018
[ 02:19 yuri ] Original commit   Revision:487783
487783 science/Makefile
487783 science/h5z-zfp
487783 science/h5z-zfp/Makefile
487783 science/h5z-zfp/distinfo
487783 science/h5z-zfp/files
487783 science/h5z-zfp/files/patch-src_Makefile
487783 science/h5z-zfp/pkg-descr
New port: science/h5z-zfp: Registered ZFP compression plugin for HDF5
Tue, 18 Dec 2018
[ 06:36 yuri ] Original commit   Revision:487730
487730 science/Makefile
487730 science/py-GPyOpt
487730 science/py-GPyOpt/Makefile
487730 science/py-GPyOpt/distinfo
487730 science/py-GPyOpt/pkg-descr
New port: science/py-GPyOpt: Bayesian optimization toolbox based on GPy
[ 06:24 yuri ] Original commit   Revision:487729
487729 science/Makefile
487729 science/py-GPy
487729 science/py-GPy/Makefile
487729 science/py-GPy/distinfo
487729 science/py-GPy/pkg-descr
New port: science/py-GPy: Gaussian process toolbox
[ 06:20 yuri ] Original commit   Revision:487728
487728 science/Makefile
487728 science/py-paramz
487728 science/py-paramz/Makefile
487728 science/py-paramz/distinfo
487728 science/py-paramz/pkg-descr
New port: science/py-paramz: Parameterization framework
Mon, 17 Dec 2018
[ 02:58 yuri ] Original commit   Revision:487648
487648 science/Makefile
487648 science/drawxtl
487648 science/drawxtl/Makefile
487648 science/drawxtl/distinfo
487648 science/drawxtl/files
487648 science/drawxtl/files/patch-Makefile
487648 science/drawxtl/pkg-descr
New port: science/drawxtl: Crystal structure visualization tool
Tue, 11 Dec 2018
[ 13:02 rene ] Original commit   Revision:487235
487235 MOVED
487235 astro/Makefile
487235 astro/celestia-gnome
487235 audio/Makefile
487235 audio/grip
487235 audio/jack-rack
487235 comms/Makefile
487235 comms/efax-gtk
487235 comms/ge-x2212
487235 comms/gmfsk

(Only the first 10 of 84 ports in this commit are shown above. View all ports for this commit)
Remove expired ports:
2018-12-10 net/g2ipmsg: GNOME 2 application
2018-12-10 net/grdesktop: GNOME 2 application
2018-12-10 textproc/gnome-spell: GNOME 2 application
2018-12-10 textproc/sagasu: GNOME 2 application
2018-12-10 deskutils/planner: GNOME 2 application
2018-12-10 deskutils/multisync: GNOME 2 application
2018-12-10 deskutils/drivel: GNOME 2 application
2018-12-10 deskutils/notecase: GNOME 2 application
2018-12-10 deskutils/gtodo: GNOME 2 application
2018-12-10 deskutils/gtweakui: GNOME 2 application
2018-12-10 deskutils/gnotime: GNOME 2 application
2018-12-10 deskutils/gruler: GNOME 2 application
2018-12-10 japanese/gjiten: GNOME 2 application
2018-12-10 graphics/truevision: GNOME 2 application
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Thu, 6 Dec 2018
[ 20:30 sunpoet ] Original commit   Revision:486781
486781 science/Makefile
486781 science/py-pygeodesy
486781 science/py-pygeodesy/Makefile
486781 science/py-pygeodesy/distinfo
486781 science/py-pygeodesy/pkg-descr
Add py-pygeodesy 18.11.12

PyGeodesy is a pure Python implementation of geodesy tools for various
ellipsoidal and spherical earth models using precision trigonometric,
vector-based and approximate methods for geodetic (lat-/longitude) and
geocentric cartesian (x/y/z) coordinates.

WWW: https://github.com/mrJean1/PyGeodesy
Tue, 27 Nov 2018
[ 08:15 yuri ] Original commit   Revision:485990
485990 science/Makefile
485990 science/yoda
485990 science/yoda/Makefile
485990 science/yoda/distinfo
485990 science/yoda/pkg-descr
485990 science/yoda/pkg-plist
New port: science/yoda: Particle physics package with classes for data analysis,
histogramming
Wed, 21 Nov 2018
[ 22:34 yuri ] Original commit   Revision:485564
485564 science/Makefile
485564 science/quantum-espresso-pseudopotentials
485564 science/quantum-espresso-pseudopotentials/Makefile
485564 science/quantum-espresso-pseudopotentials/distinfo
485564 science/quantum-espresso-pseudopotentials/files
485564 science/quantum-espresso-pseudopotentials/files/patch-make__ps
485564 science/quantum-espresso-pseudopotentials/files/patch-make__test
485564 science/quantum-espresso-pseudopotentials/pkg-descr
New port: science/quantum-espresso-pseudopotentials: Pseudopotentials for use
with Quantum Espresso
Mon, 19 Nov 2018
[ 21:56 yuri ] Original commit   Revision:485365
485365 science/Makefile
485365 science/berkeleygw
485365 science/berkeleygw/Makefile
485365 science/berkeleygw/distinfo
485365 science/berkeleygw/files
485365 science/berkeleygw/files/patch-LOGO_print__logo.sh
485365 science/berkeleygw/files/patch-Makefile
485365 science/berkeleygw/files/patch-bin_assemble__manual.sh
485365 science/berkeleygw/files/patch-config_generic.serial.freebsd.mk
485365 science/berkeleygw/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
New port: science/berkeleygw: Scientific program aimed at the ab initio virtual
experimentation

Only a serial version for now.
Fri, 16 Nov 2018
[ 02:55 yuri ] Original commit   Revision:485059
485059 science/Makefile
485059 science/opensim-core
485059 science/opensim-core/Makefile
485059 science/opensim-core/distinfo
485059 science/opensim-core/files
485059 science/opensim-core/files/patch-Applications_opensim-cmd_CMakeLists.txt
485059 science/opensim-core/files/patch-CMakeLists.txt
485059 science/opensim-core/files/patch-OpenSim_Common_IO.cpp
485059 science/opensim-core/pkg-descr
485059 science/opensim-core/pkg-plist
New port: science/opensim-core: Software for modeling of musculoskeletal
structures
Thu, 15 Nov 2018
[ 06:40 yuri ] Original commit   Revision:485003
485003 science/Makefile
485003 science/simbody
485003 science/simbody/Makefile
485003 science/simbody/distinfo
485003 science/simbody/pkg-descr
485003 science/simbody/pkg-plist
New port: science/simbody: Multibody dynamics library for (bio)mechanical
systems simulation
Tue, 13 Nov 2018
[ 18:35 rm ] Original commit   Revision:484893
484893 science/Makefile
484893 science/py-lifelines
484893 science/py-lifelines/Makefile
484893 science/py-lifelines/distinfo
484893 science/py-lifelines/pkg-descr
Survival analysis in Python, including Kaplan Meier, Nelson Aalen and regression

WWW: https://github.com/CamDavidsonPilon/lifelines/
Mon, 12 Nov 2018
[ 03:02 yuri ] Original commit   Revision:484789
484789 science/Makefile
484789 science/sparta
484789 science/sparta/Makefile
484789 science/sparta/distinfo
484789 science/sparta/files
484789 science/sparta/files/patch-STUBS_mpi.c
484789 science/sparta/pkg-descr
New port: science/sparta: Gas simulator: SPARTA DSMC software package
Mon, 5 Nov 2018
[ 05:16 yuri ] Original commit   Revision:484170
484170 science/Makefile
484170 science/esys-particle
484170 science/esys-particle/Makefile
484170 science/esys-particle/distinfo
484170 science/esys-particle/files
484170 science/esys-particle/files/patch-CMakeLists.txt
484170 science/esys-particle/files/patch-Geometry_SphAggGougeBlock.hpp
484170 science/esys-particle/files/patch-Tools_StressCalculator_Contact.cpp
484170 science/esys-particle/files/patch-Tools_dump2vtk_frame__vtk.cpp
484170 science/esys-particle/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
New port: science/esys-particle: Particle-based numerical modelling software
Sun, 4 Nov 2018
[ 17:18 thierry ] Original commit   Revision:484112
484112 science/Makefile
bft, ecs, fvm, mei and ncs have been merged to code_saturne.
[ 08:24 yuri ] Original commit   Revision:483965
483965 science/Makefile
483965 science/liggghts
483965 science/liggghts/Makefile
483965 science/liggghts/distinfo
483965 science/liggghts/files
483965 science/liggghts/files/patch-CMakeLists.txt
483965 science/liggghts/files/patch-finish.cpp
483965 science/liggghts/files/patch-math__vector.h
483965 science/liggghts/files/patch-pair.cpp
483965 science/liggghts/files/patch-utils.h

(Only the first 10 of 12 ports in this commit are shown above. View all ports for this commit)
New port: science/liggghts: Discrete element method particle simulation software
Wed, 31 Oct 2018
[ 23:05 yuri ] Original commit   Revision:483624
483624 science/Makefile
483624 science/latte
483624 science/latte/Makefile
483624 science/latte/distinfo
483624 science/latte/pkg-descr
New port: science/latte: Quantum chemistry: Density functional tight binding
molecular dynamics
Tue, 30 Oct 2018
[ 04:36 yuri ] Original commit   Revision:483445
483445 science/Makefile
483445 science/gpaw-setups
483445 science/gpaw-setups/Makefile
483445 science/gpaw-setups/distinfo
483445 science/gpaw-setups/pkg-descr
New port: science/gpaw-setups: Setups (data files) for py-gpaw, the DFT quantum
chemistry software
Thu, 25 Oct 2018
[ 07:36 yuri ] Original commit   Revision:482958
482958 science/Makefile
482958 science/coordgenlibs
482958 science/coordgenlibs/Makefile
482958 science/coordgenlibs/distinfo
482958 science/coordgenlibs/pkg-descr
482958 science/coordgenlibs/pkg-plist
New port: science/coordgenlibs: Schrodinger-developed 2D coordinate generation
[ 07:24 yuri ] Original commit   Revision:482957
482957 science/Makefile
482957 science/maeparser
482957 science/maeparser/Makefile
482957 science/maeparser/distinfo
482957 science/maeparser/pkg-descr
482957 science/maeparser/pkg-plist
New port: science/maeparser: Parser for Schrodinger Maestro files
Wed, 24 Oct 2018
[ 05:36 yuri ] Original commit   Revision:482879
482879 science/Makefile
482879 science/molsketch
482879 science/molsketch/Makefile
482879 science/molsketch/distinfo
482879 science/molsketch/files
482879 science/molsketch/files/patch-CMakeLists.txt
482879 science/molsketch/files/patch-buildvariables
482879 science/molsketch/files/patch-molsketch_programversion.cpp
482879 science/molsketch/files/patch-molsketch_programversion.h
482879 science/molsketch/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
New port: science/molsketch: 2D molecule editor
Sun, 21 Oct 2018
[ 17:56 yuri ] Original commit   Revision:482718
482718 science/Makefile
482718 science/erkale
482718 science/erkale/Makefile
482718 science/erkale/distinfo
482718 science/erkale/files
482718 science/erkale/files/patch-CMakeLists.txt
482718 science/erkale/pkg-descr
482718 science/erkale/pkg-plist
New port: science/erkale: Quantum chemistry program to solve the electronic
structure of atoms
[ 17:52 yuri ] Original commit   Revision:482717
482717 science/Makefile
482717 science/py-avogadrolibs
482717 science/py-avogadrolibs/Makefile
482717 science/py-avogadrolibs/distinfo
482717 science/py-avogadrolibs/files
482717 science/py-avogadrolibs/files/patch-CMakeLists.txt
482717 science/py-avogadrolibs/pkg-descr
New port: science/py-avogadrolibs: Python bindings for Avogadro2 chemistry
libraries
Thu, 18 Oct 2018
[ 21:21 yuri ] Original commit   Revision:482378
482378 science/Makefile
482378 science/mmtf
482378 science/mmtf/Makefile
482378 science/mmtf/distinfo
482378 science/mmtf/files
482378 science/mmtf/files/patch-tests_mmtf__tests.cpp
482378 science/mmtf/pkg-descr
New port: science/mmtf: C++ implementation of the MMTF API, decoder and encoder
Wed, 17 Oct 2018
[ 01:04 yuri ] Original commit   Revision:482266
482266 science/Makefile
482266 science/avogadro2
482266 science/avogadro2/Makefile
482266 science/avogadro2/distinfo
482266 science/avogadro2/files
482266 science/avogadro2/pkg-descr
482266 science/avogadro2/pkg-plist
New port: science/avogadro2: Chemical editor and visualization application
[ 01:02 yuri ] Original commit   Revision:482265
482265 science/Makefile
482265 science/avogadrolibs
482265 science/avogadrolibs/Makefile
482265 science/avogadrolibs/distinfo
482265 science/avogadrolibs/files/patch-CMakeLists.txt
482265 science/avogadrolibs/files/patch-avogadro_qtplugins_importpqr_CMakeLists.txt
482265 science/avogadrolibs/files/patch-avogadro_qtplugins_plugindownloader_CMakeLists.txt
482265 science/avogadrolibs/files/patch-avogadro_rendering_ambientocclusionspheregeometry.cpp
482265 science/avogadrolibs/files/patch-avogadro_rendering_cylindergeometry.cpp
482265 science/avogadrolibs/files/patch-avogadro_rendering_meshgeometry.cpp

(Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
New port: science/avogadrolibs: Avogadro2 libraries for chemical editor and
visualization applications
Tue, 16 Oct 2018
[ 22:58 yuri ] Original commit   Revision:482264
482264 science/Makefile
482264 science/libmsym
482264 science/libmsym/Makefile
482264 science/libmsym/distinfo
482264 science/libmsym/pkg-descr
482264 science/libmsym/pkg-plist
New port: science/libmsym: Molecular point group symmetry library
Sun, 14 Oct 2018
[ 23:15 yuri ] Original commit   Revision:482124
482124 science/Makefile
482124 science/wxmacmolplt
482124 science/wxmacmolplt/Makefile
482124 science/wxmacmolplt/distinfo
482124 science/wxmacmolplt/pkg-descr
482124 science/wxmacmolplt/pkg-plist
New port: science/wxmacmolplt: Graphical user interface principally for the
GAMESS program
[ 03:18 yuri ] Original commit   Revision:482018
482018 MOVED
482018 science/Makefile
482018 science/gamess-us
482018 science/gamess-us/Makefile
482018 science/gamess-us/distinfo
482018 science/gamess-us/files/Makefile.tools
482018 science/gamess-us/files/Makefile.top
482018 science/gamess-us/files/install.info
482018 science/gamess-us/files/license.txt
482018 science/gamess-us/files/patch-comp

(Only the first 10 of 24 ports in this commit are shown above. View all ports for this commit)
Re-add port: science/gamess-us: General Atomic and Molecular Electronic
Structure System (US)

It used to be in science/gamess and was removed in 2014.
Mon, 8 Oct 2018
[ 07:52 yuri ] Original commit   Revision:481519
481519 science/Makefile
481519 science/simint
481519 science/simint/Makefile
481519 science/simint/distinfo
481519 science/simint/pkg-descr
481519 science/simint/pkg-plist
New port: science/simint: Obara-Saika (OS) method of calculating electron
repulsion integrals
Sun, 7 Oct 2018
[ 21:54 yuri ] Original commit   Revision:481495
481495 science/Makefile
481495 science/molgif
481495 science/molgif/Makefile
481495 science/molgif/distinfo
481495 science/molgif/pkg-descr
New port: science/molgif: Tool to create GIF animations of molecules
[ 00:19 yuri ] Original commit   Revision:481406
481406 MOVED
481406 biology/Makefile
481406 biology/tinker
481406 science/Makefile
481406 science/tinker
481406 science/tinker/Makefile
481406 science/tinker/distinfo
481406 science/tinker/files/patch-bench__bench1.run
481406 science/tinker/files/patch-bench__bench2.run
481406 science/tinker/files/patch-bench__bench3.run

(Only the first 10 of 16 ports in this commit are shown above. View all ports for this commit)
biology/tinker: Update 7.1.3 -> 8.4.4; Move to science/

Port changes:
* Take maintainership
* Implement the 'benchmarks' target, and stop installing benchmarks
* Add USES=gmake
* Update license
* Change MASTER_SITES and WWW to https
* Silence some commands
Tue, 25 Sep 2018
[ 18:11 yuri ] Original commit   Revision:480687
480687 science/Makefile
480687 science/bagel
480687 science/bagel/Makefile
480687 science/bagel/distinfo
480687 science/bagel/files
480687 science/bagel/files/patch-src_Makefile.am
480687 science/bagel/pkg-descr
480687 science/bagel/pkg-plist
New port: science/bagel: Brilliantly Advanced General Electronic-structure
Library
Sun, 23 Sep 2018
[ 08:43 yuri ] Original commit   Revision:480461
480461 science/Makefile
480461 science/elk
480461 science/elk/Makefile
480461 science/elk/distinfo
480461 science/elk/files
480461 science/elk/files/make.inc.in
480461 science/elk/files/patch-src_Makefile
480461 science/elk/patch-Makefile
480461 science/elk/pkg-descr
New port: science/elk: All-electron full-potential linearised
augmented-planewave code
Fri, 21 Sep 2018
[ 07:11 yuri ] Original commit   Revision:480230
480230 science/Makefile
480230 science/py-PyFR
480230 science/py-PyFR/Makefile
480230 science/py-PyFR/distinfo
480230 science/py-PyFR/pkg-descr
New port: science/py-PyFR: Framework for solving advection-diffusion type
problems
Wed, 19 Sep 2018
[ 21:33 yuri ] Original commit   Revision:480113
480113 science/Makefile
480113 science/py-chempy
480113 science/py-chempy/Makefile
480113 science/py-chempy/distinfo
480113 science/py-chempy/pkg-descr
New port: science/py-chempy: Package useful useful for solving problems in
chemistry
Fri, 14 Sep 2018
[ 07:44 yuri ] Original commit   Revision:479761
479761 science/Makefile
479761 science/luscus
479761 science/luscus/Makefile
479761 science/luscus/distinfo
479761 science/luscus/files
479761 science/luscus/files/patch-CMakeLists.txt
479761 science/luscus/pkg-descr
479761 science/luscus/pkg-plist
New port: science/luscus: Molecular editor and viewer
[ 05:37 yuri ] Original commit   Revision:479760
479760 science/Makefile
479760 science/py-phono3py
479760 science/py-phono3py/Makefile
479760 science/py-phono3py/distinfo
479760 science/py-phono3py/pkg-descr
New port: science/py-phono3py: Software to calculate phonon-phonon interaction
and related properties
[ 05:01 yuri ] Original commit   Revision:479759
479759 science/Makefile
479759 science/py-phonopy
479759 science/py-phonopy/Makefile
479759 science/py-phonopy/distinfo
479759 science/py-phonopy/pkg-descr
New port: science/py-phonopy: Package for phonon calculations at harmonic and
quasi-harmonic levels
[ 03:10 yuri ] Original commit   Revision:479756
479756 science/Makefile
479756 science/py-molmod
479756 science/py-molmod/Makefile
479756 science/py-molmod/distinfo
479756 science/py-molmod/pkg-descr
New port: science/py-molmod: Collection of molecular modelling tools for python
Wed, 12 Sep 2018
[ 22:25 yuri ] Original commit   Revision:479622
479622 science/Makefile
479622 science/dftbplus
479622 science/dftbplus/Makefile
479622 science/dftbplus/distinfo
479622 science/dftbplus/files
479622 science/dftbplus/files/patch-external_xmlf90_make.dpbuild
479622 science/dftbplus/files/patch-make.config
479622 science/dftbplus/files/patch-makefile
479622 science/dftbplus/pkg-descr
479622 science/dftbplus/pkg-plist
New port: science/dftbplus: Package for performing fast atomistic simulations
[ 03:00 yuri ] Original commit   Revision:479581
479581 science/Makefile
479581 science/openmx
479581 science/openmx/Makefile
479581 science/openmx/distinfo
479581 science/openmx/files
479581 science/openmx/files/patch-Band__DFT__Col.c
479581 science/openmx/files/patch-Band__DFT__NonCol.c
479581 science/openmx/files/patch-Cluster__DFT.c
479581 science/openmx/files/patch-Cluster__DFT__ON2.c
479581 science/openmx/files/patch-Input__std.c

(Only the first 10 of 17 ports in this commit are shown above. View all ports for this commit)
New port: science/openmx: Nanoscale material simulations using density
functional theories (DFT)
Mon, 10 Sep 2018
[ 05:53 yuri ] Original commit   Revision:479360
479360 LEGAL
479360 science/Makefile
479360 science/msms
479360 science/msms/Makefile
479360 science/msms/distinfo-amd64
479360 science/msms/distinfo-i386
479360 science/msms/files
479360 science/msms/files/extract-license.awk
479360 science/msms/pkg-descr
New port: science/msms: Program to efficiently compute molecular surfaces
Sun, 9 Sep 2018
[ 20:57 yuri ] Original commit   Revision:479335
479335 science/Makefile
479335 science/lm
479335 science/lm/Makefile
479335 science/lm/distinfo
479335 science/lm/files
479335 science/lm/files/patch-Makefile
479335 science/lm/files/patch-src_c_lm_main_Main.cpp
479335 science/lm/files/patch-src_c_lm_main_runSimulation.cpp
479335 science/lm/files/patch-src_c_lm_rng_XORShift.cpp
479335 science/lm/files/patch-src_c_lm_thread_Thread.cpp

(Only the first 10 of 13 ports in this commit are shown above. View all ports for this commit)
New port: science/lm: Software for sampling trajectories of the
reaction-diffusion equations
Sat, 8 Sep 2018
[ 23:28 yuri ] Original commit   Revision:479263
479263 science/Makefile
479263 science/namd
479263 science/namd/Makefile
479263 science/namd/distinfo
479263 science/namd/files
479263 science/namd/files/patch-Makefile
479263 science/namd/files/patch-config
479263 science/namd/pkg-descr
New port: science/namd: Computer software for molecular dynamics simulation
Thu, 6 Sep 2018
[ 06:31 yuri ] Original commit   Revision:479085
479085 science/Makefile
479085 science/lammps
479085 science/lammps/Makefile
479085 science/lammps/distinfo
479085 science/lammps/pkg-descr
479085 science/lammps/pkg-plist
New port: science/lammps: Classical molecular dynamics code with a focus on
materials modeling
[ 05:14 yuri ] Original commit   Revision:479084
479084 science/Makefile
479084 science/mdynamix
479084 science/mdynamix/Makefile
479084 science/mdynamix/distinfo
479084 science/mdynamix/pkg-descr
New port: science/mdynamix: General purpose molecular dynamics code
Tue, 4 Sep 2018
[ 21:28 yuri ] Original commit   Revision:478991
478991 science/Makefile
478991 science/cp2k
478991 science/cp2k/Makefile
478991 science/cp2k/distinfo
478991 science/cp2k/files
478991 science/cp2k/files/patch-makefiles_Makefile
478991 science/cp2k/pkg-descr
New port: science/cp2k: Quantum chemistry and solid state physics software
package
[ 15:05 yuri ] Original commit   Revision:478966
478966 LEGAL
478966 science/Makefile
478966 science/atom
478966 science/atom/Makefile
478966 science/atom/distinfo
478966 science/atom/files
478966 science/atom/files/patch-arch.make.sample
478966 science/atom/pkg-descr
New port: science/atom: Program for DFT calculations in atoms
[ 15:03 yuri ] Original commit   Revision:478965
478965 science/Makefile
478965 science/libgridxc
478965 science/libgridxc/Makefile
478965 science/libgridxc/distinfo
478965 science/libgridxc/files
478965 science/libgridxc/files/patch-build.sh
478965 science/libgridxc/files/patch-gridxc.mk.in
478965 science/libgridxc/files/patch-makefile
478965 science/libgridxc/files/patch-top.gridxc.mk.in
478965 science/libgridxc/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
New port: science/libgridxc: Library to compute the exchange and correlation
energy and potentials
[ 06:07 yuri ] Original commit   Revision:478925
478925 MOVED
478925 science/Makefile
478925 science/mpqc-mpich
478925 science/mpqc/Makefile
Remove science/mpqc-mpich: Enable MPI option in science/mpqc by default

* MPICH option in science/mpqc is renamed to MPI, because MPI exists in many
other
  ports and there's MPI_DESC predefined for it.
* MPI option in science/mpqc is made default.
Mon, 3 Sep 2018
[ 17:51 yuri ] Original commit   Revision:478886
478886 science/Makefile
478886 science/siesta
478886 science/siesta/Makefile
478886 science/siesta/distinfo
478886 science/siesta/pkg-descr
New port: science/siesta: Program to perform efficient electronic structure
calculations
[ 04:09 yuri ] Original commit   Revision:478841
478841 science/Makefile
478841 science/wannier90
478841 science/wannier90/Makefile
478841 science/wannier90/distinfo
478841 science/wannier90/files
478841 science/wannier90/files/patch-src_Makefile.2
478841 science/wannier90/pkg-descr
New port: science/wannier90: Maximally-localized Wannier functions (MLWFs) and
Wannier90
Sun, 2 Sep 2018
[ 21:10 yuri ] Original commit   Revision:478820
478820 science/Makefile
478820 science/fleur
478820 science/fleur/Makefile
478820 science/fleur/distinfo
478820 science/fleur/pkg-descr
New port: science/fleur: FLAPW code for atomic computations in quantum chemistry
and physics
[ 07:49 yuri ] Original commit   Revision:478766
478766 science/Makefile
478766 science/dalton
478766 science/dalton/Makefile
478766 science/dalton/distinfo
478766 science/dalton/files
478766 science/dalton/files/patch-DALTON_cc_crayio.c
478766 science/dalton/files/patch-cmake_ConfigArchitecture.cmake
478766 science/dalton/files/patch-cmake_SourcesDALTON.cmake
478766 science/dalton/files/patch-dalton.in
478766 science/dalton/pkg-descr

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
New port: science/dalton: Powerful molecular electronic structure program for
quantum chemistry
[ 06:43 yuri ] Original commit   Revision:478759
478759 science/Makefile
478759 science/teem
478759 science/teem/Makefile
478759 science/teem/distinfo
478759 science/teem/pkg-descr
478759 science/teem/pkg-plist
New port: science/teem: Libraries for representing, processing and visualizing
scientific data
Sat, 1 Sep 2018
[ 18:31 yuri ] Original commit   Revision:478713
478713 science/Makefile
478713 science/py-gpaw
478713 science/py-gpaw/Makefile
478713 science/py-gpaw/distinfo
478713 science/py-gpaw/pkg-descr
New port: science/py-gpaw:  DFT and beyond within the projector-augmented wave
method in chemistry
[ 18:17 yuri ] Original commit   Revision:478712
478712 science/Makefile
478712 science/py-ase
478712 science/py-ase/Makefile
478712 science/py-ase/distinfo
478712 science/py-ase/pkg-descr
New port: science/py-ase: Atomic simulation environment
[ 06:30 yuri ] Original commit   Revision:478654
478654 science/Makefile
478654 science/jdftx
478654 science/jdftx/Makefile
478654 science/jdftx/distinfo
478654 science/jdftx/files
478654 science/jdftx/files/patch-CMakeLists.txt
478654 science/jdftx/files/patch-core_scalar.h
478654 science/jdftx/pkg-descr
478654 science/jdftx/pkg-plist
New port: science/jdftx: Software for joint density functional theory in
chemistry
Fri, 31 Aug 2018
[ 06:45 yuri ] Original commit   Revision:478522
478522 science/Makefile
478522 science/qbox
478522 science/qbox/Makefile
478522 science/qbox/distinfo
478522 science/qbox/files
478522 science/qbox/files/freebsd.mk.in
478522 science/qbox/pkg-descr
New port: science/qbox: First-principles molecular dynamics code
Tue, 28 Aug 2018
[ 00:57 yuri ] Original commit   Revision:478276
478276 science/Makefile
478276 science/libint2
478276 science/libint2/Makefile
478276 science/libint2/distinfo
478276 science/libint2/files
478276 science/libint2/files/patch-src_bin_libint_tactic.h
478276 science/libint2/pkg-descr
478276 science/libint2/pkg-plist
New port: science/libint2: Evaluate the integrals in modern atomic and molecular
theory

Repocopy of science/libint.
science/libint is at version 1.X, is incompatible, and is used by several other
packages.
Mon, 27 Aug 2018
[ 07:56 yuri ] Original commit   Revision:478180
478180 science/Makefile
478180 science/madness
478180 science/madness/Makefile
478180 science/madness/distinfo
478180 science/madness/files
478180 science/madness/files/patch-src_CMakeLists.txt
478180 science/madness/files/patch-src_madness_world_thread.cc
478180 science/madness/files/patch-src_madness_world_worldmem.h
478180 science/madness/pkg-descr
478180 science/madness/pkg-plist
New port: science/madness: Multiresolution adaptive numeric environment for
scientific simulation
[ 06:15 yuri ] Original commit   Revision:478179
478179 science/Makefile
478179 science/datawarrior
478179 science/datawarrior/Makefile
478179 science/datawarrior/distinfo
478179 science/datawarrior/pkg-descr
New port: science/datawarrior: Chemistry-aware multi-purpose data visualization
and analysis program
Sun, 26 Aug 2018
[ 19:04 yuri ] Original commit   Revision:478163
478163 science/Makefile
478163 science/multiwfn
478163 science/multiwfn/Makefile
478163 science/multiwfn/distinfo
478163 science/multiwfn/files
478163 science/multiwfn/files/patch-init_Multiwfn.02
478163 science/multiwfn/pkg-descr
New port: science/multiwfn: Multifunctional wavefunction analysis for quantum
chemistry
Sat, 25 Aug 2018
[ 18:08 yuri ] Original commit   Revision:478077
478077 science/Makefile
478077 science/gabedit
478077 science/gabedit/Makefile
478077 science/gabedit/distinfo
478077 science/gabedit/pkg-descr
New port: science/gabedit: Graphical user interface for several chemistry
software packages
Fri, 24 Aug 2018
[ 17:54 yuri ] Original commit   Revision:477973
477973 science/Makefile
477973 science/octopus
477973 science/octopus/Makefile
477973 science/octopus/distinfo
477973 science/octopus/pkg-descr
477973 science/octopus/pkg-plist
New port: science/octopus: Scientific program aimed at the ab initio virtual
experimentation
Thu, 23 Aug 2018
[ 22:00 yuri ] Original commit   Revision:477927
477927 science/Makefile
477927 science/nwchem
477927 science/nwchem/Makefile
477927 science/nwchem/distinfo
477927 science/nwchem/pkg-descr
New port: science/nwchem: High-performance computational chemistry sotware
Tue, 21 Aug 2018
[ 04:31 yuri ] Original commit   Revision:477701
477701 science/Makefile
477701 science/qwalk
477701 science/qwalk/Makefile
477701 science/qwalk/distinfo
477701 science/qwalk/files
477701 science/qwalk/files/patch-make_FreeBSD.mk
477701 science/qwalk/pkg-descr
477701 science/qwalk/pkg-plist
New port: science/qwalk: Quantum Monte Carlo package for quantum chemistry
computations
Mon, 20 Aug 2018
[ 07:44 yuri ] Original commit   Revision:477634
477634 science/Makefile
477634 science/qmcpack
477634 science/qmcpack/Makefile
477634 science/qmcpack/distinfo
477634 science/qmcpack/files
477634 science/qmcpack/files/patch-CMakeLists.txt
477634 science/qmcpack/pkg-descr
New port: science/qmcpack: Many-body ab initio Quantum Monte Carlo code for
quantum chemstry
Sun, 19 Aug 2018
[ 23:16 yuri ] Original commit   Revision:477607
477607 science/Makefile
477607 science/chrono
477607 science/chrono/Makefile
477607 science/chrono/distinfo
477607 science/chrono/files
477607 science/chrono/files/patch-src_chrono_collision_convexdecomposition_HACDv2_dgPolyhedra.cpp
477607 science/chrono/pkg-descr
477607 science/chrono/pkg-plist
New port: science/chrono: C++ library for multi-physics simulation
Thu, 9 Aug 2018
[ 08:13 yuri ] Original commit   Revision:476726
476726 MOVED
476726 science/Makefile
476726 science/xdrawchem
476726 science/xdrawchem/Makefile
476726 science/xdrawchem/distinfo
476726 science/xdrawchem/files
476726 science/xdrawchem/pkg-descr
476726 science/xdrawchem/pkg-plist
Re-add port: science/xdrawchem: Two-dimensional molecule drawing program
Wed, 8 Aug 2018
[ 19:09 brooks ] Original commit   Revision:476658
476658 MOVED
476658 science/Makefile
476658 science/py-tensorflow
Remove broken and expired port which also depends on clang38 (on 10).
Thu, 19 Jul 2018
[ 19:19 yuri ] Original commit   Revision:474971
474971 science/Makefile
474971 science/xcrysden
474971 science/xcrysden/Makefile
474971 science/xcrysden/distinfo
474971 science/xcrysden/files
474971 science/xcrysden/files/Make.sys
474971 science/xcrysden/files/patch-Makefile
474971 science/xcrysden/pkg-descr
474971 science/xcrysden/pkg-plist
New port: science/xcrysden: Crystalline and molecular structure visualisation
program
Wed, 18 Jul 2018
[ 21:47 yuri ] Original commit   Revision:474904
474904 science/Makefile
474904 science/quantum-espresso
474904 science/quantum-espresso/Makefile
474904 science/quantum-espresso/distinfo
474904 science/quantum-espresso/files
474904 science/quantum-espresso/files/patch-clib_stack.c
474904 science/quantum-espresso/files/patch-install_extlibs__makefile
474904 science/quantum-espresso/pkg-descr
474904 science/quantum-espresso/pkg-plist
New port: science/quantum-espresso: Package for research in electronic
structure, simulation, optimization
Mon, 9 Jul 2018
[ 04:41 yuri ] Original commit   Revision:474223
474223 science/Makefile
474223 science/openstructure
474223 science/openstructure/Makefile
474223 science/openstructure/distinfo
474223 science/openstructure/files
474223 science/openstructure/files/patch-cmake__support_CopyDependencies.cmake
474223 science/openstructure/files/patch-cmake__support_FindOPENSTRUCTURE.cmake
474223 science/openstructure/files/patch-cmake__support_FindPython.cmake
474223 science/openstructure/files/patch-cmake__support_OST.cmake
474223 science/openstructure/files/patch-modules_config_base.hh

(Only the first 10 of 17 ports in this commit are shown above. View all ports for this commit)
New port: science/openstructure: Molecular modelling and visualization
environment
Sun, 8 Jul 2018
[ 04:45 yuri ] Original commit   Revision:474154
474154 science/Makefile
474154 science/coot
474154 science/coot/Makefile
474154 science/coot/distinfo
474154 science/coot/files
474154 science/coot/files/patch-src_cc-interface-image.hh
474154 science/coot/files/patch-src_rama__plot.cc
474154 science/coot/pkg-descr
474154 science/coot/pkg-plist
New port: science/coot: Crystallographic Object-Oriented Toolkit
[ 01:27 yuri ] Original commit   Revision:474150
474150 science/Makefile
474150 science/clipper
474150 science/clipper/Makefile
474150 science/clipper/distinfo
474150 science/clipper/pkg-descr
474150 science/clipper/pkg-plist
New port: science/clipper: Libraries for the organisation of crystallographic
data
[ 00:39 yuri ] Original commit   Revision:474148
474148 science/Makefile
474148 science/libssm
474148 science/libssm/Makefile
474148 science/libssm/distinfo
474148 science/libssm/pkg-descr
474148 science/libssm/pkg-plist
New port: science/libssm: C++ toolkit for superposition of macromolecules
[ 00:24 yuri ] Original commit   Revision:474147
474147 science/Makefile
474147 science/libccp4
474147 science/libccp4/Makefile
474147 science/libccp4/distinfo
474147 science/libccp4/pkg-descr
474147 science/libccp4/pkg-plist
New port: science/libccp4: Protein X-ray crystallography toolkit
Sat, 7 Jul 2018
[ 23:32 yuri ] Original commit   Revision:474143
474143 science/Makefile
474143 science/mmdb2
474143 science/mmdb2/Makefile
474143 science/mmdb2/distinfo
474143 science/mmdb2/pkg-descr
474143 science/mmdb2/pkg-plist
New port: science/mmdb2: C++ toolkit for working with macromolecular coordinate
files
Sun, 1 Jul 2018
[ 05:22 yuri ] Original commit   Revision:473652
473652 science/Makefile
473652 science/py-rmf
473652 science/py-rmf/Makefile
473652 science/py-rmf/distinfo
473652 science/py-rmf/files
473652 science/py-rmf/files/patch-CMakeLists.txt
473652 science/py-rmf/files/patch-include_CMakeLists.txt
473652 science/py-rmf/files/patch-swig_CMakeLists.txt
473652 science/py-rmf/pkg-descr
473652 science/py-rmf/pkg-plist
New port: science/py-rmf: Library to support reading and writing of Rich
Molecular Format files
Fri, 29 Jun 2018
[ 09:04 yuri ] Original commit   Revision:473535
473535 science/Makefile
473535 science/rmf
473535 science/rmf/Makefile
473535 science/rmf/distinfo
473535 science/rmf/files
473535 science/rmf/files/patch-CMakeLists.txt
473535 science/rmf/pkg-descr
473535 science/rmf/pkg-plist
New port: science/rmf: Library to support reading and writing of Rich Molecular
Format files
[ 08:34 yuri ] Original commit   Revision:473533
473533 science/Makefile
473533 science/py-ScientificPython
473533 science/py-ScientificPython/Makefile
473533 science/py-ScientificPython/distinfo
473533 science/py-ScientificPython/pkg-descr
New port: science/py-ScientificPython: Various Python modules for scientific
computing
Thu, 28 Jun 2018
[ 21:18 sunpoet ] Original commit   Revision:473515
473515 science/Makefile
473515 science/eccodes
473515 science/eccodes/Makefile
473515 science/eccodes/distinfo
473515 science/eccodes/pkg-descr
473515 science/eccodes/pkg-plist
Add eccodes 2.8.0

ecCodes is a package developed by ECMWF which provides an application
programming interface and a set of tools for decoding and encoding messages in
the following formats:
- WMO FM-92 GRIB edition 1 and edition 2
- WMO FM-94 BUFR edition 3 and edition 4
- WMO GTS abbreviated header (only decoding).

A useful set of command line tools provide quick access to the messages. C,
Fortran 90 and Python interfaces provide access to the main ecCodes
functionality.

ecCodes is an evolution of GRIB-API. It is designed to provide the user with a
simple set of functions to access data from several formats with a key/value
approach.

For GRIB encoding and decoding, the GRIB-API functionality is provided fully in
ecCodes with only minor interface and behaviour changes. Interfaces for C,
Fortran 90 and Python are all maintained as in GRIB-API. However, the GRIB-API
Fortran 77 interface is no longer available.

WWW: https://software.ecmwf.int/wiki/display/ECC
Sun, 24 Jun 2018
[ 20:05 sunpoet ] Original commit   Revision:473214
473214 science/Makefile
473214 science/py-kinematics
473214 science/py-kinematics/Makefile
473214 science/py-kinematics/distinfo
473214 science/py-kinematics/pkg-descr
Add py-kinematics 0.0.7

kinematics is Python package to perform attitude kinematics. It is written
completely in Python and only requires numpy as a runtime dependency.

WWW: https://github.com/skulumani/kinematics
Mon, 18 Jun 2018
[ 02:34 yuri ] Original commit   Revision:472666
472666 science/Makefile
472666 science/py-SimpleSpectral
472666 science/py-SimpleSpectral/Makefile
472666 science/py-SimpleSpectral/distinfo
472666 science/py-SimpleSpectral/pkg-descr
New port: science/py-SimpleSpectral: Simplified scipy.signal.spectral module
with only pyFFTW support
Sun, 17 Jun 2018
[ 21:25 yuri ] Original commit   Revision:472638
472638 science/Makefile
science/Makefile: Fix sortedness
[ 21:24 yuri ] Original commit   Revision:472636
472636 science/Makefile
472636 science/py-PyQuante
472636 science/py-PyQuante/Makefile
472636 science/py-PyQuante/distinfo
472636 science/py-PyQuante/pkg-descr
New port: science/py-PyQuante: Quantum chemistry in Python
[ 02:42 yuri ] Original commit   Revision:472591
472591 science/Makefile
472591 science/dft_tools
472591 science/dft_tools/Makefile
472591 science/dft_tools/distinfo
472591 science/dft_tools/files
472591 science/dft_tools/files/patch-CMakeLists.txt
472591 science/dft_tools/pkg-descr
472591 science/dft_tools/pkg-plist
New port: science/dft_tools: Interface to DFT codes in TRIQS
Sat, 16 Jun 2018
[ 23:24 yuri ] Original commit   Revision:472576
472576 science/Makefile
472576 science/triqs
472576 science/triqs/Makefile
472576 science/triqs/distinfo
472576 science/triqs/files
472576 science/triqs/files/patch-CMakeLists.txt
472576 science/triqs/files/patch-cmake_TRIQSConfig.cmake.in
472576 science/triqs/files/patch-triqs_CMakeLists.txt
472576 science/triqs/pkg-descr
472576 science/triqs/pkg-plist
New port: science/triqs: Toolbox for Research on Interacting Quantum Systems
[ 00:37 yuri ] Original commit   Revision:472505
472505 science/Makefile
472505 science/py-abipy
472505 science/py-abipy/Makefile
472505 science/py-abipy/distinfo
472505 science/py-abipy/pkg-descr
New port: science/py-abipy: Library for analyzing the results produced by ABINIT
Fri, 15 Jun 2018
[ 23:49 yuri ] Original commit   Revision:472503
472503 science/Makefile
472503 science/py-pymatgen
472503 science/py-pymatgen/Makefile
472503 science/py-pymatgen/distinfo
472503 science/py-pymatgen/pkg-descr
New port: science/py-pymatgen: Python Materials Genomics is a robust materials
analysis code
[ 22:28 yuri ] Original commit   Revision:472499
472499 science/Makefile
472499 science/py-spglib
472499 science/py-spglib/Makefile
472499 science/py-spglib/distinfo
472499 science/py-spglib/pkg-descr
New port: science/py-spglib: Library for finding and handling crystal symmetries
[ 17:42 yuri ] Original commit   Revision:472472
472472 science/Makefile
472472 science/spglib
472472 science/spglib/Makefile
472472 science/spglib/distinfo
472472 science/spglib/pkg-descr
472472 science/spglib/pkg-plist
New port: science/spglib: C library for finding and handling crystal symmetries
Thu, 14 Jun 2018
[ 05:52 yuri ] Original commit   Revision:472355
472355 science/Makefile
472355 science/atompaw
472355 science/atompaw/Makefile
472355 science/atompaw/distinfo
472355 science/atompaw/pkg-descr
New port: science/atompaw: Tool for projector augmented wave functions for
molecular simulations

Number of commits found: 441 (showing only 100 on this page)

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