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Port details
py-GPy Gaussian process toolbox
1.13.1 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.10.0_1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-12-18 06:24:30
Last Update: 2024-06-05 02:29:46
Commit Hash: ca640e7
Also Listed In: python
License: BSD3CLAUSE
WWW:
https://sheffieldml.github.io/GPy/
Description:
GPy is a Gaussian Process (GP) framework written in python, from the Sheffield machine learning group. Gaussian processes underpin range of modern machine learning algorithms. In GPy, we've used python to implement a range of machine learning algorithms based on GPs.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • py311-GPy>0:science/py-GPy
To install the port:
cd /usr/ports/science/py-GPy/ && make install clean
To add the package, run one of these commands:
  • pkg install science/py-GPy
  • pkg install py311-GPy
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: py311-GPy
Package flavors (<flavor>: <package>)
  • py311: py311-GPy
distinfo:
TIMESTAMP = 1717492893 SHA256 (GPy-1.13.1.tar.gz) = 64d2edd6533b9ddcfe0585a4f401234c2e7181360d8f5bb3ce1adc2b89cfa115 SIZE (GPy-1.13.1.tar.gz) = 1138163

Packages (timestamps in pop-ups are UTC):
py311-GPy
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest1.13.11.13.1--1.13.1---
FreeBSD:13:quarterly-1.13.1--1.13.1---
FreeBSD:14:latest1.13.11.13.1--1.13.1---
FreeBSD:14:quarterly-1.13.1--1.13.1---
FreeBSD:15:latest1.13.11.13.1n/a-n/a---
 

py39-GPy
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest--------
FreeBSD:13:quarterly1.10.0_1-----1.10.0_1-
FreeBSD:14:latest--------
FreeBSD:14:quarterly1.10.0_1-----1.10.0_1-
FreeBSD:15:latest--n/a-n/a-1.10.0_11.10.0_1
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py311-numpy>=1.16,1<1.26,1 : math/py-numpy@py311
  2. py311-setuptools>=63.1.0 : devel/py-setuptools@py311
  3. python3.11 : lang/python311
Test dependencies:
  1. py311-pytest>=7,1 : devel/py-pytest@py311
  2. python3.11 : lang/python311
Runtime dependencies:
  1. py311-numpy>=1.16,1<1.26,1 : math/py-numpy@py311
  2. py311-scipy>=1.3.0 : science/py-scipy@py311
  3. py311-six>0 : devel/py-six@py311
  4. py311-paramz>=0.9.0 : science/py-paramz@py311
  5. py311-setuptools>=63.1.0 : devel/py-setuptools@py311
  6. python3.11 : lang/python311
This port is required by:
for Run
  1. science/py-GPyOpt

Configuration Options:
No options to configure
Options name:
science_py-GPy
USES:
localbase python
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/G/GPy/
  2. https://pypi.org/packages/source/G/GPy/
Collapse this list.

Number of commits found: 23

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.13.1
05 Jun 2024 02:29:46
commit hash: ca640e7c800061d5c966f4970e6dda37804cf650commit hash: ca640e7c800061d5c966f4970e6dda37804cf650commit hash: ca640e7c800061d5c966f4970e6dda37804cf650commit hash: ca640e7c800061d5c966f4970e6dda37804cf650 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-GPy: update 1.10.0 → 1.13.1
1.10.0_1
27 Jun 2023 19:34:34
commit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacbcommit hash: 3d9a815d9c5acbb71f4bb07738bdeab4879feacb files touched by this commit
Rene Ladan (rene) search for other commits by this committer
all: remove explicit versions in USES=python for "3.x+"

The logic in USES=python will automatically convert this to 3.8+ by
itself.

Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.

finance/quickfix: mark BROKEN with PYTHON

libtool: compile:  c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp  -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
          ^~~~~~~~~~
1 warning and 1 error generated.

Reviewed by:	portmgr, vishwin, yuri
Differential Revision:	<https://reviews.freebsd.org/D40568>
1.10.0_1
23 Apr 2023 09:09:58
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b files touched by this commit
Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
1.10.0
11 Jan 2023 15:58:34
commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656 files touched by this commit
Dmitry Marakasov (amdmi3) search for other commits by this committer
*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
1.10.0
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
1.10.0
24 Jul 2022 01:18:46
commit hash: f71ed96330d8323a5cc128d5aaf790e7b944f730commit hash: f71ed96330d8323a5cc128d5aaf790e7b944f730commit hash: f71ed96330d8323a5cc128d5aaf790e7b944f730commit hash: f71ed96330d8323a5cc128d5aaf790e7b944f730 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-GPy: Broken on systems where OpenMP isn't enabled

Reported by:	fallout
1.10.0
22 May 2021 08:33:34
commit hash: d8e3b9108293b5ca96e484ddcd4605196b38d037commit hash: d8e3b9108293b5ca96e484ddcd4605196b38d037commit hash: d8e3b9108293b5ca96e484ddcd4605196b38d037commit hash: d8e3b9108293b5ca96e484ddcd4605196b38d037 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-GPy: Update 1.9.9 -> 1.10.0

Reported by:	portscout
1.9.9_1
07 Apr 2021 08:09:01
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
1.9.9_1
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
1.9.9_1
24 Dec 2020 09:03:39
Revision:559053Original commit files touched by this commit
antoine search for other commits by this committer
scipy 1.5.4 is only compatible with python 3.6+

Reported by:	pkg-fallout
1.9.9_1
08 Apr 2020 06:35:03
Revision:531095Original commit files touched by this commit
yuri search for other commits by this committer
science/py-GPy: Change to USES=python because it builds fine with python-3.7
1.9.9_1
08 Mar 2020 21:56:37
Revision:528082Original commit files touched by this commit
jbeich search for other commits by this committer
Drop dependency on devel/openmp

- Drop if devel/llvm* was used as a substitute

Approved by:	yuri, rene (earlier version)
Differential Revision:	https://reviews.freebsd.org/D23020
1.9.9
08 Mar 2020 21:10:15
Revision:528076Original commit files touched by this commit
antoine search for other commits by this committer
Deprecate some ports using deprecated version of python

With hat:	portmgr
1.9.9
20 Oct 2019 00:41:22
Revision:514863Original commit files touched by this commit
yuri search for other commits by this committer
science/py-GPy: Update 1.9.8 -> 1.9.9

Reported by:	portscout
1.9.8_1
21 Sep 2019 18:59:57
Revision:512535Original commit files touched by this commit
jbeich search for other commits by this committer
devel/openmp: update to 9.0.0

- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783

Changes:	http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI:		https://abi-laboratory.pro/tracker/timeline/llvm_openmp/
1.9.8
28 Jul 2019 03:22:14
Revision:507492Original commit files touched by this commit
yuri search for other commits by this committer
science/py-GPy: Update 1.9.6 -> 1.9.8

Reported by:	repology
1.9.6_2
26 Jul 2019 20:46:57
Revision:507372Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
1.9.6_1
23 May 2019 21:21:49
Revision:502358Original commit files touched by this commit
yuri search for other commits by this committer
science/py-GPy: Fix build by explicitly setting the path to libomp.so in
xx_DEPENDS lines

Reported by:	fallout
1.9.6_1
19 May 2019 02:35:46
Revision:502006Original commit files touched by this commit
yuri search for other commits by this committer
science/py-GPy: Unbreak on 13: /usr/lib/libomp.so conflicting with the 'openmp'
package has been added to 13-CURRENT

Reported by:	fallout
1.9.6_1
08 May 2019 16:05:53
Revision:501030Original commit files touched by this commit
jbeich search for other commits by this committer
devel/openmp: phase out

- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)

PR:		236907
Approved by:	bapt (maintainer)
Differential Revision:	https://reviews.freebsd.org/D19767
1.9.6
05 Apr 2019 23:27:57
Revision:498038Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Document incompatibility with python 3.7+

Approved by:	portmgr blanket
1.9.6
18 Dec 2018 06:24:15
Revision:487729Original commit files touched by this commit
yuri search for other commits by this committer
New port: science/py-GPy: Gaussian process toolbox

Number of commits found: 23