| Port details |
- py-psims Writers and controlled vocabulary manager for PSI-MS's mzML and mzIdentML standards
- 1.4.0 science
 =0      Package not present on quarterly.This port was created during this quarter. It will be in the next quarterly branch but not the current one. - Maintainer: sunpoet@FreeBSD.org
- Port Added: 2026-09-29 19:31:10
- Last Update: 2026-09-29 19:17:28
- Commit Hash: 301164a
- Also Listed In: python
- License: APACHE20
- WWW:
- https://mobiusklein.github.io/psims/docs/build/html/
- https://github.com/mobiusklein/psims
- Description:
- Prototype work for a unified API for writing Proteomics Standards Initiative
standardized formats for mass spectrometry:
1. mzML
2. mzIdentML
3. mzMLb
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- USE_RC_SUBR (Service Scripts)
- no SUBR information found for this port
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}psims>0:science/py-psims@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/science/py-psims/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-psims
- pkg install py312-psims
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py312-psims listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py312-psims
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1790435632
SHA256 (psims-1.4.0.tar.gz) = ac7730c507864eb141877a700dd79e5fc7afc7da30998778b91c50e0f9f5e8e7
SIZE (psims-1.4.0.tar.gz) = 23888972
No package information for this port in our database- Sometimes this happens. Not all ports have packages. This is doubly so for new ports, like this one.
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py312-setuptools>=0 : devel/py-setuptools@py312
- py312-wheel>=0 : devel/py-wheel@py312
- python3.12 : lang/python312
- py312-build>=0 : devel/py-build@py312
- py312-installer>=0 : devel/py-installer@py312
- Test dependencies:
-
- python3.12 : lang/python312
- Runtime dependencies:
-
- py312-lxml>=0 : devel/py-lxml@py312
- py312-numpy>=0,1 : math/py-numpy@py312
- py312-six>=0 : devel/py-six@py312
- py312-sqlalchemy20>=0 : databases/py-sqlalchemy20@py312
- python3.12 : lang/python312
- This port is required by:
- for Run
-
- science/py-pyteomics
Configuration Options:- No options to configure
- Options name:
- science_py-psims
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
1.4.0
29 Sep 2026 19:17:28
 |
Po-Chuan Hsieh (sunpoet) |
science/py-psims: Add py-psims 1.4.0
Prototype work for a unified API for writing Proteomics Standards Initiative
standardized formats for mass spectrometry:
1. mzML
2. mzIdentML
3. mzMLb |
Number of commits found: 1
|
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