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Port details
py-trx-python Experiments with new file format for tractography
0.2.9 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 0.2.9Version of this port present on the latest quarterly branch.
Maintainer: search for ports maintained by this maintainer
Port Added: 2023-12-17 19:40:40
Last Update: 2024-06-24 22:17:01
Commit Hash: 14a73ac
Also Listed In: python
trx is a Python implementation of the trx file-format for tractography data.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • py311-trx-python>0:science/py-trx-python
To install the port:
cd /usr/ports/science/py-trx-python/ && make install clean
To add the package, run one of these commands:
  • pkg install science/py-trx-python
  • pkg install py311-trx-python
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: py311-trx-python
Package flavors (<flavor>: <package>)
  • py311: py311-trx-python
TIMESTAMP = 1702835339 SHA256 (trx-python-0.2.9.tar.gz) = 16b4104d7c991879c601f60e8d587decac50ce60388aae8d0c754a92136d1caf SIZE (trx-python-0.2.9.tar.gz) = 86016

Packages (timestamps in pop-ups are UTC):


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py311-deepdiff>0 : devel/py-deepdiff@py311
  2. py311-nibabel>0 : science/py-nibabel@py311
  3. py311-numpy>=1.16,1<1.27,1 : math/py-numpy@py311
  4. py311-packaging>=19.0 : devel/py-packaging@py311
  5. py311-setuptools-scm>=3.4 : devel/py-setuptools-scm@py311
  6. py311-setuptools_scm_git_archive>0 : devel/py-setuptools_scm_git_archive@py311
  7. py311-wheel>0 : devel/py-wheel@py311
  8. py311-setuptools>0 : devel/py-setuptools@py311
  9. cython-3.11 : lang/cython@py311
  10. python3.11 : lang/python311
  11. py311-build>=0 : devel/py-build@py311
  12. py311-installer>=0 : devel/py-installer@py311
Test dependencies:
  1. py311-flake8>=0 : devel/py-flake8@py311
  2. py311-psutil>0 : sysutils/py-psutil@py311
  3. py311-pytest-console-scripts>0 : devel/py-pytest-console-scripts@py311
  4. py311-pytest>=7,1 : devel/py-pytest@py311
  5. python3.11 : lang/python311
Runtime dependencies:
  1. py311-setuptools-scm>0 : devel/py-setuptools-scm@py311
  2. python3.11 : lang/python311
This port is required by:
for Run
  1. science/py-dipy

Configuration Options:
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Number of commits found: 3

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
24 Jun 2024 22:17:01
commit hash: 14a73ac2f1ba7b3926015479cf6cb833cedf0a08commit hash: 14a73ac2f1ba7b3926015479cf6cb833cedf0a08commit hash: 14a73ac2f1ba7b3926015479cf6cb833cedf0a08commit hash: 14a73ac2f1ba7b3926015479cf6cb833cedf0a08 files touched by this commit
Wen Heping (wen) search for other commits by this committer
science/py-trx-python: Fix build with removing setuptools from RUN_D

PR:		270510
Approved by:	portmgr(blanket, fix build)
29 Feb 2024 07:18:32
commit hash: 5d4139f8bdb67bd6e8328422f9762661bd0d6454commit hash: 5d4139f8bdb67bd6e8328422f9762661bd0d6454commit hash: 5d4139f8bdb67bd6e8328422f9762661bd0d6454commit hash: 5d4139f8bdb67bd6e8328422f9762661bd0d6454 files touched by this commit
Charlie Li (vishwin) search for other commits by this committer
devel/py-setuptools-scm: update to 8.0.4

Directory and PORTNAME changed to match normalised name in release
tarball; consumers updated to match.

Although setuptools itself is specified as a run dependency in the
Python package metadata, it is currently left out here to prevent
environment pollution until at least PR 270510 is committed.
Additionally, this version of setuptools-scm requires setuptools>=61,
which means this version is only meant for USE_PYTHON=pep517 ports
as all USE_PYTHON=distutils ports will switch to devel/py-setuptools58
also after PR 270510. science/py-emmet-core is switched to
devel/py-setuptools_scm7 accordingly, as it specifies setuptools-scm<8.
devel/py-{flit-scm,hatch-vcs} have ${PY_SETUPTOOLS} added to
RUN_DEPENDS to compensate.

Further details:

Reported by: yuri
Co-authored by: matthew
Exp-run by: antoine (earlier iteration)
Approved by: yuri (science/py-emmet-core, previous iteration)
PR: 272134
Differential Revision:
17 Dec 2023 19:01:48
commit hash: f47c4702d35c68b06f643f35c9cb97aa064e4bb5commit hash: f47c4702d35c68b06f643f35c9cb97aa064e4bb5commit hash: f47c4702d35c68b06f643f35c9cb97aa064e4bb5commit hash: f47c4702d35c68b06f643f35c9cb97aa064e4bb5 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
science/py-trx-python: New port: Experiments with new file format for

Number of commits found: 3