b45c FreshPorts -- science/afni
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Port details
afni 2012.04.17.2129_3 science on this many watch lists=1 search for ports that depend on this port
Advanced Functional Neuro Imaging
Maintained by: jwbacon@tds.net search for ports maintained by this maintainer
Port Added: 25 Jan 2006 17:37:44
Also Listed In: biology graphics
License: not specified in port


This is a port of AFNI, Analysis of Functional Neuro Imaging.  AFNI is
a tool for analyzing 3 dimensional images, especially functional MRI
images used in brain mapping research.

WWW:	http://afni.nimh.nih.gov/afni/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only required dependencies information. Optional dependencies are not covered.

Required To Build:
  1. devel/gmake
  2. x11/libXi
  3. x11/libXpm
Required To Run:
  1. graphics/jpeg
  2. multimedia/mpeg_encode
  3. graphics/whirlgif
  4. graphics/netpbm
  5. sysutils/endian
  6. x11/libXi
  7. x11/libXpm
Required Libraries:
  1. x11-toolkits/open-motif
  2. math/R
  3. math/gsl
  4. x11-toolkits/open-motif
  5. graphics/libGLw
  6. graphics/libGLU
There are no ports dependent upon this port

To install the port: cd /usr/ports/science/afni/ && make install clean
To add the package: pkg_add -r afni


Configuration Options
     No options to configure

Master Sites:
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/AFNI-2012.04.17.2129/
  2. http://personalpages.tds.net/~jwbacon/Ports/distfiles/AFNI/2012.04.17.2129/
  3. http://www.acadix.biz/Ports/distfiles/AFNI/2012.04.17.2129/

Number of commits found: 32

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
27 Apr 2013 18:25:25
Original commit files touched by this commit  2012.04.17.2129_3
mva search for other commits by this committer
- Convert USE_ICONV=yes to USES=iconv
- Change USE_GNOME=pkgconfig|gnomehack to USES=pathfix|pkgconfig and
  USE_GETTEXT=yes to USES=gettext while here
07 Mar 2013 04:21:35
Original commit files touched by this commit  2012.04.17.2129_3
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
04 Jan 2013 17:51:39
Original commit files touched by this commit  2012.04.17.2129_2
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
24 Jun 2012 21:53:38
Original commit files touched by this commit  2012.04.17.2129_1
dougb search for other commits by this committer
s/X11BASE/LOCALBASE/, or equivalent.

The X11BASE variable is long gone, however these ports were not updated.
01 Jun 2012 05:26:28
Original commit files touched by this commit  2012.04.17.2129_1
dinoex search for other commits by this committer
- update png to 1.5.10
11 May 2012 17:05:09
Original commit files touched by this commit  2012.04.17.2129
pawel search for other commits by this committer
- Update to build 2012-04-17 [1]
- Projest has new homepage [1]
- Mark MAKE_JOBS_UNSAFE

PR:             ports/167651 [1]
Submitted by:   Jason Bacon <jwbacon@tds.net> (maintainer) [1]
24 Oct 2011 09:11:38
Original commit files touched by this commit  2008.01.02.1043_6
dougb search for other commits by this committer
The vast majority of pkg-descr files had the following format when they
had both lines:

Author: ...
WWW: ....

So standardize on that, and move them to the end of the file when necessary.

Also fix some more whitespace, and remove more "signature tags" of varying
forms, like -- name, etc.

s/AUTHOR/Author/

A few other various formatting issues
03 Jul 2011 13:22:25
Original commit files touched by this commit  2008.01.02.1043_6
ohauer search for other commits by this committer
 - remove MD5
02 May 2011 12:44:53
Original commit files touched by this commit  2008.01.02.1043_6
makc search for other commits by this committer
Bump PORTREVISION after open-mofit update
31 May 2010 02:01:56
Original commit files touched by this commit  2008.01.02.1043_5
ade search for other commits by this committer
Bounce PORTREVISION for gettext-related ports.  Have fun, ya'll.
28 Mar 2010 06:47:48
Original commit files touched by this commit  2008.01.02.1043_4
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
05 Feb 2010 11:46:55
Original commit files touched by this commit  2008.01.02.1043_3
dinoex search for other commits by this committer
- update to jpeg-8
19 Jun 2009 20:06:31
Original commit files touched by this commit  2008.01.02.1043_2
linimon search for other commits by this committer
Update maintainer's email address.  Had already been done for his
other ports.
24 Jan 2009 10:02:09
Original commit files touched by this commit  2008.01.02.1043_2
flz search for other commits by this committer
Fix science/afni after X.org 7.4 import (needs Xi).

Reported by:    pointyhat (via pav)
25 Jul 2008 12:24:09
Original commit files touched by this commit  2008.01.02.1043_1
pav search for other commits by this committer
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default
MAKE_ENV
06 Jun 2008 13:59:05
Original commit files touched by this commit  2008.01.02.1043_1
edwin search for other commits by this committer
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
19 Apr 2008 17:56:05
Original commit files touched by this commit  2008.01.02.1043
  Sanity Test Failure
miwi search for other commits by this committer
- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)
28 Jan 2008 16:42:02
Original commit files touched by this commit  2008.01.02.1043
tabthorpe search for other commits by this committer
- Update to 2008.01.02.1043

PR:             ports/119961
Submitted by:   Jason Bacon <bacon smithers.neuro.mcw.edu> (maintainer)
21 Jun 2007 12:33:48
Original commit files touched by this commit  2007.06.15.1339
miwi search for other commits by this committer
- Update to 2007.06.15.1339
- Unbreak

PR:             113887
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
10 Jun 2007 04:04:38
Original commit files touched by this commit  2007.04.18.1830_1
kris search for other commits by this committer
BROKEN: Does not compile
19 May 2007 20:32:57
Original commit files touched by this commit  2007.04.18.1830_1
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
21 Apr 2007 13:37:39
Original commit files touched by this commit  2007.04.18.1830
miwi search for other commits by this committer
- Update to 2007.04.18.1830
- Respect X11BASE

PR:             111890
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
01 Dec 2006 14:07:50
Original commit files touched by this commit  2006.06.30.1332
laszlof search for other commits by this committer
Respect X11BASE

PR:     ports/106101
Submitted by:   self
Approved by:    Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
Reported by:    pointyhat
24 Sep 2006 18:24:09
Original commit files touched by this commit  2006.06.30.1332
pav search for other commits by this committer
- Fix plugins
- Update to 2006.06.30.1332

PR:             ports/103318
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
06 Jul 2006 21:57:06
Original commit files touched by this commit  2006.03.21.1314
linimon search for other commits by this committer
Remove backquote from BROKEN string to avoid upsetting portsmon code.

Hat:            portmgr
25 May 2006 14:23:50
Original commit files touched by this commit  2006.03.21.1314
arved search for other commits by this committer
Update to 2006.03.21.1314

PR:             97404
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
15 Apr 2006 18:24:01
Original commit files touched by this commit  2005.12.30.0934.2
arved search for other commits by this committer
Update to 2005.12.30.0934.2

PR:             94302
Submitted by:   maintainer
13 Feb 2006 10:24:18
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Change `NOT_FOR_ARCHS' with `if ARCH then BROKEN'

Noticed by:     danfe
Approved by:    garga (mentor)
09 Feb 2006 15:58:54
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Mark NOT_FOR_ARCHS=sparc64, maintainer did not fix the build for 7 days
after kris' mail

Approved by:    garga (mentor)
30 Jan 2006 10:03:13
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Changes to the port:
Author fixed the problem with filename versioning by placing filenames
without version in their name in a subdirectory on the web server.

Changes to the software itself:
-DPIC -fPIC used only for amd64 and ia64, suggested by kris

Approved by:    garga (mentor)
26 Jan 2006 09:35:45
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Update Makefile.FreeBSD_PORT's checksum.

-DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it
compile on amd64.

Approved by:    garga (mentor)
25 Jan 2006 17:34:35
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Add new port science/afni

AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing
3 dimensional images, especially functional MRI images used in
brain mapping research.

WWW: http://afni.nimh.nih.gov/

PR:             ports/90752
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
Reviewed by:    garga (mentor)
Approved by:    garga (mentor)

Number of commits found: 32

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