| Port details |
- p5-Bio-Graphics Generate GD Images of Bio::Seq Objects
- 2.40_2 biology
 =1      2.40_2Version of this port present on the latest quarterly branch. - Maintainer: perl@FreeBSD.org
- Port Added: 2009-03-10 18:52:27
- Last Update: 2022-09-07 21:58:51
- Commit Hash: fb16dfe
- People watching this port, also watch:: mkvtoolnix, rubygem-twitter4r, libunwind, py39-venusian
- Also Listed In: perl5
- License: ART10 GPLv1+
- WWW:
- https://metacpan.org/release/Bio-Graphics
- Description:
- p5-Bio-Graphics is a simple GD-based renderer (diagram drawer)
for DNA and protein sequences.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- p5-Bio-Graphics>0:biology/p5-Bio-Graphics
- To install the port:
- cd /usr/ports/biology/p5-Bio-Graphics/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/p5-Bio-Graphics
- pkg install p5-Bio-Graphics
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: p5-Bio-Graphics
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1482004816
SHA256 (Bio-Graphics-2.40.tar.gz) = 7b20bcd9d87f3786b111ddeff2f60a51ec6712273f43547b73325dba3bebed32
SIZE (Bio-Graphics-2.40.tar.gz) = 1105973
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- p5-Bio-Coordinate>=1.007000 : biology/p5-Bio-Coordinate
- p5-Bio-SCF>=1.01 : biology/p5-Bio-SCF
- p5-BioPerl>=1.007000 : biology/p5-BioPerl
- p5-CGI>=0 : www/p5-CGI
- p5-GD>=2.30 : graphics/p5-GD
- p5-GD-SVG>=0.32 : graphics/p5-GD-SVG
- p5-Statistics-Descriptive>=2.6 : math/p5-Statistics-Descriptive
- perl5>=5.32.r0<5.33 : lang/perl5.32
- p5-Module-Build>=0.4206 : devel/p5-Module-Build
- perl5>=5.32.r0<5.33 : lang/perl5.32
- Runtime dependencies:
-
- p5-Bio-Coordinate>=1.007000 : biology/p5-Bio-Coordinate
- p5-Bio-SCF>=1.01 : biology/p5-Bio-SCF
- p5-BioPerl>=1.007000 : biology/p5-BioPerl
- p5-CGI>=0 : www/p5-CGI
- p5-GD>=2.30 : graphics/p5-GD
- p5-GD-SVG>=0.32 : graphics/p5-GD-SVG
- p5-Statistics-Descriptive>=2.6 : math/p5-Statistics-Descriptive
- perl5>=5.32.r0<5.33 : lang/perl5.32
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- biology_p5-Bio-Graphics
- USES:
- perl5
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
07 Sep 2022 21:58:51
 |
Stefan Eßer (se) |
Remove WWW entries moved into port Makefiles
Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner) |
2.40_2
07 Sep 2022 21:10:59
|
Stefan Eßer (se) |
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above  ) |
2.40_2
20 Jul 2022 14:20:57
|
Tobias C. Berner (tcberner) |
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca> (Only the first 15 lines of the commit message are shown above ) |
2.40_2
06 Apr 2021 14:31:07
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
2.40_2
06 Oct 2018 13:06:45
 |
des |
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.
Approved by: portmgr (adamw) |
2.40_2
27 May 2018 20:15:20
|
sunpoet |
Update WWW
search.cpan.org is shutting down.
It will redirect to metacpan.org after June 25, 2018.
With hat: perl |
2.40_2
15 Sep 2017 08:58:50
|
mat |
Fix license information for portgs that use "the same license as Perl".
Sponsored by: Absolight |
2.40_2
01 Jun 2017 23:50:28
|
sunpoet |
Remove outdated PERL_LEVEL check |
2.40_2
31 Jan 2017 16:21:46
|
mat |
Bump PORTREVISION for ports affected by the fix the last commit.
Done with: Tools/scripts/bump-revision.sh
Sponsored by: Absolight |
2.40_1
19 Dec 2016 15:54:43
|
sunpoet |
- Update *_DEPENDS: Bio::Coordinate family has been moved from
biology/p5-BioPerl into biology/p5-Bio-Coordinate
- Bump PORTREVISION for dependency change |
2.40
18 Dec 2016 15:26:11
|
sunpoet |
- Update to 2.40
- Update *_DEPENDS for biology/p5-bioperl renaming
- Add NO_ARCH
- Sort PLIST
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes |
2.39
01 Apr 2016 13:29:17
|
mat |
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight |
2.39
14 Sep 2015 12:19:50
|
mat |
Make it so that the default Perl is always called perl5.
- Move Perl's man1 files along with its man3 files.
- Move where Perl installs its modules man1 pages.
- Convert the ports installing man1 pages.
- Make different Perl versions installable at the same time.
Though you should note that only the default version can be used to
install Perl modules, and the non default Perl versions cannot use the
modules installed via ports if they contain .so as they are installed
in a version specific directory.
Reviewed by: bapt (the Mk bits)
Exp-run by: antoine
Sponsored by: Absolight
Differential Revision: https://reviews.freebsd.org/D3542 |
2.39
12 Mar 2015 23:00:03
|
adamw |
Some OCD cleanups on some of the perl@ ports.
- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
the plist was randomized before committing
A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier. |
2.39
07 Dec 2014 07:44:06
|
wen |
- Update to 2.39
Changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.39/Changes |
2.38_1
26 Nov 2014 13:08:38
|
mat |
Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:
site_perl : lib/perl5/site_perl/5.18
site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
perl_man3 : lib/perl5/5.18/man/man3
Now we have:
site_perl : lib/perl5/site_perl
site_arch : lib/perl5/site_perl/mach/5.18
perl_man3 : lib/perl5/site_perl/man/man3
Modules without any .so will be installed at the same place regardless of the (Only the first 15 lines of the commit message are shown above ) |
2.38
20 Oct 2014 07:10:48
|
bapt |
Cleanup plist |
2.38
25 Jul 2014 23:08:59
|
mat |
Really fix.
Sponsored by: Absolight |
2.38
25 Jul 2014 15:06:46
|
mat |
Fix build.
Sponsored by: Absolight |
2.38
24 Jul 2014 09:48:04
|
pi |
biology/p5-Bio-Graphics: 2.37 -> 2.38 |
2.37
07 Jun 2014 01:54:42
|
vanilla |
Stagify, remove BROKEN. |
2.37
09 Apr 2014 09:49:03
|
bapt |
Mark as broken unstaged perl ports
With hat: portmgr |
2.37
20 Sep 2013 15:55:44
|
bapt |
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology) |
2.37
02 Aug 2013 18:52:11
|
mat |
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default. |
2.37
20 Jul 2013 10:03:10
|
wen |
- Update to 2.37
Changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.37/Changes |
2.33
03 Mar 2013 15:22:43
|
eadler |
Add missing item to pkg-plist reported by QAT but not reported by poudriere. |
2.33
03 Mar 2013 01:45:01
|
eadler |
Update to 2.33 |
2.32
24 Jan 2013 14:36:56
|
jadawin |
- Update to 2.32
- Changelog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.32/Changes |
2.31
07 Dec 2012 13:49:15
|
tobez |
Update to 2.31.
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes
Feature safe: yes |
2.29
18 Jun 2012 09:30:35
|
sunpoet |
- Update to 2.29
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes |
2.28_1
01 Jun 2012 05:26:28
|
dinoex |
- update png to 1.5.10 |
2.28
17 Apr 2012 13:03:00
|
wen |
- Update to 2.28
ChangeLog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.28/Changes |
2.26
11 Feb 2012 02:04:24
|
sunpoet |
- Update to 2.26
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes |
2.25
07 Oct 2011 11:22:46
|
culot |
- Fix LICENSE (Artistic 1 instead of Artistic 2)
- Pet portlint(1)
PR: ports/161336
Submitted by: Simon Olofsson <simon@olofsson.de> |
2.25
02 Oct 2011 17:03:33
|
sunpoet |
- Update to 2.25
- Sort MAN3 and PLIST
- Pet portlint
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes |
2.24
01 Jun 2011 20:21:51
|
bapt |
- update to 2.24
- add licenses
- changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.24/Changes |
2.18
23 Dec 2010 06:37:08
|
wen |
- Update to 2.18
ChangeLog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.18/Changes |
2.15
24 Nov 2010 06:19:46
|
pgollucci |
- Also remove them from pkg-plist lists not from me that crept in |
2.15
16 Nov 2010 08:07:27
|
wen |
- Update to 2.15
Changelog: http://search.cpan.org/src/LDS/Bio-Graphics-2.15/Changes
PR: ports/152189
Submitted by: Gea-Suan Lin <gslin@gslin.org> |
2.14
19 Oct 2010 10:42:43
|
wen |
- Update to 2.14
ChangeLog: http://search.cpan.org/src/LDS/Bio-Graphics-2.14/Changes |
2.13
26 Sep 2010 08:32:26
|
wen |
- Update to 2.13 |
2.11
30 Jun 2010 07:41:07
|
wen |
- Update to 2.11
Feature safe: yes |
2.09
18 May 2010 08:27:03
|
wen |
- Update to 2.09 |
2.08
14 May 2010 13:05:15
|
wen |
- Update to 2.0.8 |
2.07
10 May 2010 02:36:58
|
wen |
- Update to 2.0.7
- Set maintainer to perl@ |
2.04
20 Apr 2010 08:48:47
|
wen |
- Update to 2.04 |
2.02
30 Mar 2010 01:22:56
|
wen |
- Update to 2.02 |
2.01_1
28 Mar 2010 06:47:48
|
dinoex |
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi |
2.01
10 Mar 2010 01:35:57
|
wen |
- Update to 2.01 |
2.00
10 Feb 2010 06:10:33
|
wen |
- Update to 2.00 |
1.995_3
05 Feb 2010 11:46:55
|
dinoex |
- update to jpeg-8 |
1.995_2
29 Jan 2010 14:52:21
|
kuriyama |
- Remove unneeded dependencies which is in perl-5.8.9 dist
(part 19; last!).
Approved by: portmgr (itetcu) |
1.995
07 Jan 2010 02:27:20
|
wen |
- Update to 1.995 |
1.994
11 Dec 2009 08:02:53
|
wen |
- Update to 1.994 |
1.993
04 Dec 2009 11:53:48
|
wen |
- Update to 1.993 |
1.992
20 Nov 2009 05:10:17
|
wen |
- Update to 1.992
- Update my mail address to FreeBSD |
1.982
28 Aug 2009 23:36:45
|
miwi |
- Update to 0.982
PR: 138264
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
1.97_1
31 Jul 2009 13:57:52
|
dinoex |
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by: edwin |
1.97
05 Jul 2009 22:24:00
|
miwi |
- Update to 1.97
PR: 136310
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
1.95
02 Jun 2009 21:34:06
|
miwi |
- Update to 1.95
PR: 135141
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
1.94
01 May 2009 14:54:31
|
miwi |
- Update to 1.94
Approved by: maintainer implicit |
1.93
04 Apr 2009 17:45:12
|
miwi |
- Update to 1.93
PR: 133342
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
1.91
25 Mar 2009 17:38:35
|
miwi |
- Update to 1.91
PR: 133065
Submitted by: Wen Heping <wenheping@gmail.com> (maintainer) |
1.90
19 Mar 2009 16:34:47
|
miwi |
- Update to 1.90
PR: 132659
Submitted by: Wen heping <wenheping@gmail.com> (maintainer) |
1.84
10 Mar 2009 18:50:49
|
miwi |
p5-Bio-Graphics is a simple GD-based renderer (diagram drawer)
for DNA and protein sequences.
WWW: http://search.cpan.org/dist/Bio-Graphics/
PR: ports/132088
Submitted by: Wen Heping <wenheping at gmail.com> |
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