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Port details
afni Advanced Functional Neuro Imaging
20.1.06 science on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port 19.1.20Version of this port present on the latest quarterly branch.
There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
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Port Added: 2006-01-25 17:37:44
Last Update: 2020-05-18 02:29:41
SVN Revision: 535703

People watching this port, also watch: exifprobe, l0phtcrack, qgis

Also Listed In: biology graphics perl5 python
License: GPLv2
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (1962 items)
  1. /usr/local/share/licenses/afni-20.1.06/catalog.mk
  2. /usr/local/share/licenses/afni-20.1.06/LICENSE
  3. /usr/local/share/licenses/afni-20.1.06/GPLv2
  4. bin/1dApar2mat
  5. bin/1dAstrip
  6. bin/1dBandpass
  7. bin/1dBport
  8. bin/1dCorrelate
  9. bin/1dDW_Grad_o_Mat
  10. bin/1dDW_Grad_o_Mat++
  11. bin/1dFlagMotion
  12. bin/1dGC.R
  13. bin/1dMarry
  14. bin/1dNLfit
  15. bin/1dRplot
  16. bin/1dRplot.R
  17. bin/1dSEM
  18. bin/1dSEMr.R
  19. bin/1dSVAR.R
  20. bin/1dTsort
  21. bin/1dUpsample
  22. bin/1d_tool.py
  23. bin/1dcat
  24. bin/@djunct_ssw_intermed_edge_imgs
  25. bin/adjunct_simplify_cost.py
  26. bin/1ddot
  27. bin/1deval
  28. bin/1dfft
  29. bin/1dgenARMA11
  30. bin/1dgrayplot
  31. bin/1dmatcalc
  32. bin/1dnorm
  33. bin/1dplot
  34. bin/1dplot.py
  35. bin/1dsound
  36. bin/1dsum
  37. bin/1dsvd
  38. bin/1dtranspose
  39. bin/24swap
  40. bin/2dImReg
  41. bin/2dcat
  42. bin/2perm
  43. bin/2swap
  44. bin/3dABoverlap
  45. bin/3dAFNIto3D
  46. bin/3dAFNItoANALYZE
  47. bin/3dAFNItoMINC
  48. bin/3dAFNItoNIFTI
  49. bin/3dAFNItoNIML
  50. bin/3dAFNItoRaw
  51. bin/3dANALYZEtoAFNI
  52. bin/3dANOVA
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  54. bin/3dANOVA3
  55. bin/3dAOV.R
  56. bin/3dAcost
  57. bin/3dAllineate
  58. bin/3dAmpToRSFC
  59. bin/3dAnatNudge
  60. bin/3dAnhist
  61. bin/3dAttribute
  62. bin/3dAutoTcorrelate
  63. bin/3dAutobox
  64. bin/3dAutomask
  65. bin/3dBRAIN_VOYAGERtoAFNI
  66. bin/3dBandpass
  67. bin/3dBlurInMask
  68. bin/3dBlurToFWHM
  69. bin/3dBrainSync
  70. bin/3dBrickStat
  71. bin/3dCM
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  75. bin/3dClustSim
  76. bin/3dClusterize
  77. bin/3dCompareAffine
  78. bin/3dConformist
  79. bin/3dConvolve
  80. bin/3dCountSpikes
  81. bin/3dDFT
  82. bin/3dDTeig
  83. bin/3dDTtoDWI
  84. bin/3dDTtoNoisyDWI
  85. bin/3dDWItoDT
  86. bin/3dDWUncert
  87. bin/3dDeconvolve
  88. bin/3dDeconvolve_f
  89. bin/3dDegreeCentrality
  90. bin/3dDespike
  91. bin/3dDetrend
  92. bin/3dECM
  93. bin/3dEigsToDT
  94. bin/3dEmpty
  95. bin/3dEntropy
  96. bin/3dErrtsCormat
  97. bin/3dExchange
  98. bin/3dExtractGroupInCorr
  99. bin/3dExtrema
  100. bin/3dFDR
  101. bin/3dFFT
  102. bin/3dFWHM
  103. bin/3dFWHMx
  104. bin/3dFourier
  105. bin/3dFriedman
  106. bin/3dGC.R
  107. bin/3dGenFeatureDist
  108. bin/3dGenPriors
  109. bin/3dGetrow
  110. bin/3dGrayplot
  111. bin/3dGroupInCorr
  112. bin/3dHist
  113. bin/3dICA.R
  114. bin/3dICC
  115. bin/3dICC.R
  116. bin/3dICC_REML.R
  117. bin/3dISC
  118. bin/3dISC.R
  119. bin/3dIntracranial
  120. bin/3dInvFMRI
  121. bin/3dKS.R
  122. bin/3dKruskalWallis
  123. bin/3dLFCD
  124. bin/3dLME
  125. bin/3dLME.R
  126. bin/3dLMEr
  127. bin/3dLMEr.R
  128. bin/3dLRflip
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  130. bin/3dLocalACF
  131. bin/3dLocalBistat
  132. bin/3dLocalHistog
  133. bin/3dLocalPV
  134. bin/3dLocalSVD
  135. bin/3dLocalstat
  136. bin/3dLombScargle
  137. bin/3dMEMA
  138. bin/3dMEMA.R
  139. bin/3dMEPFM
  140. bin/3dMEPFM.R
  141. bin/3dMINCtoAFNI
  142. bin/3dMSE
  143. bin/3dMVM
  144. bin/3dMVM.R
  145. bin/3dMVM_validator
  146. bin/3dMannWhitney
  147. bin/3dMaskToASCII
  148. bin/3dMatch
  149. bin/3dMax
  150. bin/3dMean
  151. bin/3dMedianFilter
  152. bin/3dMultiThresh
  153. bin/3dNLfim
  154. bin/3dNetCorr
  155. bin/3dNormalityTest
  156. bin/3dNotes
  157. bin/3dNwarpAdjust
  158. bin/3dNwarpApply
  159. bin/3dNwarpCalc
  160. bin/3dNwarpCat
  161. bin/3dNwarpFuncs
  162. bin/3dNwarpXYZ
  163. bin/3dOverlap
  164. bin/3dPAR2AFNI.pl
  165. bin/3dPFM
  166. bin/3dPFM.R
  167. bin/3dPVmap
  168. bin/3dPeriodogram
  169. bin/3dPolyfit
  170. bin/3dProbTrackID
  171. bin/3dPval
  172. bin/3dQwarp
  173. bin/3dREMLfit
  174. bin/3dROIMaker
  175. bin/3dROIstats
  176. bin/3dRSFC
  177. bin/3dRank
  178. bin/3dRankizer
  179. bin/3dReHo
  180. bin/3dRegAna
  181. bin/3dRetinoPhase
  182. bin/3dRowFillin
  183. bin/3dRprogDemo
  184. bin/3dRprogDemo.R
  185. bin/3dSeg
  186. bin/3dSetupGroupInCorr
  187. bin/3dSharpen
  188. bin/3dSignatures
  189. bin/3dSignatures.R
  190. bin/3dSkullStrip
  191. bin/3dSliceNDice
  192. bin/3dSpaceTimeCorr
  193. bin/3dSpatNorm
  194. bin/3dStatClust
  195. bin/3dSurf2Vol
  196. bin/3dSurfMask
  197. bin/3dSynthesize
  198. bin/3dTORTOISEtoHere
  199. bin/3dTRfix
  200. bin/3dTSgen
  201. bin/3dTagalign
  202. bin/3dTcat
  203. bin/3dTcorr1D
  204. bin/3dTcorrMap
  205. bin/3dTcorrelate
  206. bin/3dTfilter
  207. bin/3dTfitter
  208. bin/3dThreetoRGB
  209. bin/3dTnorm
  210. bin/3dToutcount
  211. bin/3dToyProg
  212. bin/3dTproject
  213. bin/3dTqual
  214. bin/3dTrackID
  215. bin/3dTshift
  216. bin/3dTsmooth
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  218. bin/3dTsplit4D
  219. bin/3dTstat
  220. bin/3dTto1D
  221. bin/3dTwotoComplex
  222. bin/3dUndump
  223. bin/3dUnifize
  224. bin/3dUniformize
  225. bin/3dUpsample
  226. bin/3dVecRGB_to_HSL
  227. bin/3dVol2Surf
  228. bin/3dWarp
  229. bin/3dWarpDrive
  230. bin/3dWavelets
  231. bin/3dWilcoxon
  232. bin/3dWinsor
  233. bin/3dXClustSim
  234. bin/3dXYZcat
  235. bin/3dZcat
  236. bin/3dZcutup
  237. bin/3dZeropad
  238. bin/3dZipperZapper
  239. bin/3dZregrid
  240. bin/3danisosmooth
  241. bin/3daxialize
  242. bin/3dbuc2fim
  243. bin/3dbucket
  244. bin/3dcalc
  245. bin/3dclust
  246. bin/3dcopy
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  249. bin/3ddot_beta
  250. bin/3ddup
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  253. bin/3dfim+
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  256. bin/3dinfill
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  258. bin/3dkmeans
  259. bin/3dmaskSVD
  260. bin/3dmask_tool
  261. bin/3dmaskave
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  264. bin/3dmatmult
  265. bin/3dmaxima
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  270. bin/3dpc
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  273. bin/3drename
  274. bin/3dresample
  275. bin/3dretroicor
  276. bin/3drotate
  277. bin/3dsvm
  278. bin/3dsvm_linpredict
  279. bin/3dtoXdataset
  280. bin/3dttest
  281. bin/3dttest++
  282. bin/3dvolreg
  283. bin/4swap
  284. bin/@1dDiffMag
  285. bin/@2dwarper
  286. bin/@2dwarper.Allin
  287. bin/@4Daverage
  288. bin/@ANATICOR
  289. bin/@AddEdge
  290. bin/@AfniEnv
  291. bin/@AfniOrient2RAImap
  292. bin/@AfniOrientSign
  293. bin/@Align_Centers
  294. bin/@Atlasize
  295. bin/@Center_Distance
  296. bin/@CheckForAfniDset
  297. bin/@ClustExp_CatLab
  298. bin/@ClustExp_run_shiny
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  301. bin/@DTI_studio_reposition
  302. bin/@DeblankFileNames
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  304. bin/@DriveAfni
  305. bin/@DriveSuma
  306. bin/@ElectroGrid
  307. bin/@ExamineGenFeatDists
  308. bin/@FS_roi_label
  309. bin/@FSlabel2dset
  310. bin/@FindAfniDsetPath
  311. bin/@FromRAI
  312. bin/@FullPath
  313. bin/@GetAfniBin
  314. bin/@GetAfniDims
  315. bin/@GetAfniID
  316. bin/@GetAfniOrient
  317. bin/@GetAfniPrefix
  318. bin/@GetAfniRes
  319. bin/@GetAfniView
  320. bin/@GradFlipTest
  321. bin/@Install_3dPFM_Demo
  322. bin/@Install_AfniRetinoDemo
  323. bin/@Install_ClustScat_Demo
  324. bin/@Install_D99_macaque
  325. bin/@Install_DBSproc
  326. bin/@Install_FATCAT_DEMO
  327. bin/@Install_FATCAT_DEMO2
  328. bin/@Install_FATMVM_DEMO
  329. bin/@Install_InstaCorr_Demo
  330. bin/@Install_MACAQUE_DEMO
  331. bin/@Install_MEICA_Demo
  332. bin/@Install_NIH_Marmoset
  333. bin/@Install_RSFMRI_Motion_Group_Demo
  334. bin/@Install_TSrestMovieDemo
  335. bin/@IsoMasks
  336. bin/@MakeLabelTable
  337. bin/@NoExt
  338. bin/@NoPound
  339. bin/@NoisySkullStrip
  340. bin/@Purify_1D
  341. bin/@Quiet_Talkers
  342. bin/@ROI_Corr_Mat
  343. bin/@R_funclist
  344. bin/@RenamePanga
  345. bin/@Reorder
  346. bin/@RetinoProc
  347. bin/@SSwarper
  348. bin/@SUMA_AlignToExperiment
  349. bin/@SUMA_FSvolToBRIK
  350. bin/@SUMA_Make_Spec_Caret
  351. bin/@SUMA_Make_Spec_FS
  352. bin/@SUMA_Make_Spec_SF
  353. bin/@SUMA_renumber_FS
  354. bin/@ScaleVolume
  355. bin/@ScriptCheck
  356. bin/@Shift_Volume
  357. bin/@ShowDynamicRange
  358. bin/@SkullStrip_TouchUp
  359. bin/@Spharm.examples
  360. bin/@SurfSmooth.HEAT_07.examples
  361. bin/@T1scale
  362. bin/@TimeDiff
  363. bin/@ToRAI
  364. bin/@UpdateAfni
  365. bin/@VolCenter
  366. bin/@afni.run.me
  367. bin/@afni_R_package_install
  368. bin/@afni_refacer_make_master
  369. bin/@afni_refacer_make_master_addendum
  370. bin/@afni_refacer_make_onebigA12
  371. bin/@afni_refacer_run
  372. bin/@align_partial_oblique
  373. bin/@animal_warper
  374. bin/@auto_align
  375. bin/@auto_tlrc
  376. bin/@build_afni_Xlib
  377. bin/@chauffeur_afni
  378. bin/@clean_help_dir
  379. bin/@clip_volume
  380. bin/@compute_OC_weights
  381. bin/@compute_gcor
  382. bin/@demo_prompt
  383. bin/@diff.files
  384. bin/@diff.tree
  385. bin/@djunct_4d_imager
  386. bin/@djunct_4d_slices_to_3d_vol
  387. bin/@djunct_anonymize
  388. bin/@djunct_dwi_selector.tcsh
  389. bin/@djunct_edgy_align_check
  390. bin/@djunct_glue_imgs_vert
  391. bin/@djunct_json_value.py
  392. bin/@djunct_montage_coordinator
  393. bin/@djunct_slice_space
  394. bin/@djunct_vol_3slice_select
  395. bin/@escape-
  396. bin/@extract_meica_ortvec
  397. bin/@fast_roi
  398. bin/@fat_tract_colorize
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  405. bin/@isOblique
  406. bin/@make_plug_diff
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  421. bin/@suma_reprefixize_spec
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  423. bin/@thickness_master
  424. bin/@toMNI_Awarp
  425. bin/@toMNI_Qwarpar
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  428. bin/AFNI_Batch_R
  429. bin/AFNI_atlas_spaces.niml
  430. bin/AFNI_version.txt
  431. bin/AFNIio.R
  432. bin/AFNIplot.R
  433. bin/AlphaSim
  434. bin/AnalyzeTrace
  435. bin/BayesianGroupAna.R
  436. bin/BayesianGroupAna.py
  437. bin/BrainSkin
  438. bin/CMakeLists.txt
  439. bin/ClustExp_HistTable.py
  440. bin/ClustExp_StatParse.py
  441. bin/CompareSurfaces
  442. bin/ConvertDset
  443. bin/ConvertSurface
  444. bin/ConvexHull
  445. bin/CreateIcosahedron
  446. bin/DTIStudioFibertoSegments
  447. bin/Dimon
  448. bin/Dimon1
  449. bin/DoPerRoi.py
  450. bin/DriveSuma
  451. bin/ExamineXmat
  452. bin/ExamineXmat.R
  453. bin/FATCAT_matplot
  454. bin/FD2
  455. bin/FIRdesign
  456. bin/FSread_annot
  457. bin/GLTsymtest
  458. bin/HalloSuma
  459. bin/Ifile
  460. bin/InstaTract
  461. bin/IsoSurface
  462. bin/Level2.R
  463. bin/MBA
  464. bin/MBA.R
  465. bin/MakeColorMap
  466. bin/MapIcosahedron
  467. bin/ParseName
  468. bin/RBA
  469. bin/RBA.R
  470. bin/ROI2dataset
  471. bin/ROIgrow
  472. bin/RSFgen
  473. bin/RetroTS.py
  474. bin/SUMA_glxdino
  475. bin/SUMA_paperplane
  476. bin/SUMA_pixmap2eps
  477. bin/SampBias
  478. bin/ScaleToMap
  479. bin/Signatures.R
  480. bin/SpharmDeco
  481. bin/SpharmReco
  482. bin/Surf2VolCoord
  483. bin/SurfClust
  484. bin/SurfDist
  485. bin/SurfDsetInfo
  486. bin/SurfExtrema
  487. bin/SurfFWHM
  488. bin/SurfInfo
  489. bin/SurfMeasures
  490. bin/SurfPatch
  491. bin/SurfQual
  492. bin/SurfRetinoMap
  493. bin/SurfSmooth
  494. bin/SurfToSurf
  495. bin/SurfaceMetrics
  496. bin/Vecwarp
  497. bin/Xphace
  498. bin/abids_json_info.py
  499. bin/abids_json_tool.py
  500. bin/abids_tool.py
  501. bin/abut
  502. bin/adjunct_calc_mont_dims.py
  503. bin/adjunct_combine_str.py
  504. bin/adjunct_is_label.py
  505. bin/adjunct_make_script_and_rst.py
  506. bin/adjunct_select_str.py
  507. bin/adwarp
  508. bin/afni
  509. bin/afni_check_omp
  510. bin/afni_fs_aparc+aseg_2000.txt
  511. bin/afni_fs_aparc+aseg_2009.txt
  512. bin/afni_history
  513. bin/afni_open
  514. bin/afni_proc.py
  515. bin/afni_python_wrapper.py
  516. bin/afni_restproc.py
  517. bin/afni_run_R
  518. bin/afni_seeds_per_space.txt
  519. bin/afni_skeleton.py
  520. bin/afni_system_check.py
  521. bin/afni_vcheck
  522. bin/aiv
  523. bin/align_epi_anat.py
  524. bin/apqc_make_html.py
  525. bin/apqc_make_tcsh.py
  526. bin/apsearch
  527. bin/auto_warp.py
  528. bin/byteorder
  529. bin/cat_matvec
  530. bin/ccalc
  531. bin/cifti_tool
  532. bin/column_cat
  533. bin/count
  534. bin/dcm2niix_afni
  535. bin/demo.fixed.niml.do
  536. bin/demo.mobile.niml.do
  537. bin/demoExpt.py
  538. bin/dicom_hdr
  539. bin/dicom_hinfo
  540. bin/dicom_to_raw
  541. bin/dsetstat2p
  542. bin/eg_main_chrono.py
  543. bin/ent16
  544. bin/fat_lat_csv.py
  545. bin/fat_mat_sel.py
  546. bin/fat_mvm_gridconv.py
  547. bin/fat_mvm_prep.py
  548. bin/fat_mvm_review.py
  549. bin/fat_mvm_scripter.py
  550. bin/fat_proc_align_anat_pair
  551. bin/fat_proc_axialize_anat
  552. bin/fat_proc_connec_vis
  553. bin/fat_proc_convert_dcm_anat
  554. bin/fat_proc_convert_dcm_dwis
  555. bin/fat_proc_decmap
  556. bin/fat_proc_dwi_to_dt
  557. bin/fat_proc_filter_dwis
  558. bin/fat_proc_grad_plot
  559. bin/fat_proc_imit2w_from_t1w
  560. bin/fat_proc_map_to_dti
  561. bin/fat_proc_select_vols
  562. bin/fat_roi_row.py
  563. bin/fdrval
  564. bin/fftest
  565. bin/file_tool
  566. bin/fim2
  567. bin/float_scan
  568. bin/from3d
  569. bin/ftosh
  570. bin/ge_header
  571. bin/gen_epi_review.py
  572. bin/gen_group_command.py
  573. bin/gen_ss_review_scripts.py
  574. bin/gen_ss_review_table.py
  575. bin/get_afni_model_PRF
  576. bin/get_afni_model_PRF_6
  577. bin/get_afni_model_PRF_6_BAD
  578. bin/gifti_tool
  579. bin/help_format
  580. bin/im2niml
  581. bin/images_equal
  582. bin/imand
  583. bin/imaver
  584. bin/imcalc
  585. bin/imcat
  586. bin/imcutup
  587. bin/imdump
  588. bin/immask
  589. bin/imreg
  590. bin/imrotate
  591. bin/imstack
  592. bin/imstat
  593. bin/imupsam
  594. bin/inspec
  595. bin/lpc_align.py
  596. bin/make_pq_script.py
  597. bin/make_random_timing.py
  598. bin/make_stim_times.py
  599. bin/map_TrackID
  600. bin/mayo_analyze
  601. bin/meica.py
  602. bin/mritopgm
  603. bin/mycat
  604. bin/myget
  605. bin/neuro_deconvolve.py
  606. bin/nicat
  607. bin/niccc
  608. bin/nifti1_tool
  609. bin/nifti_tool
  610. bin/niml_feedme
  611. bin/niprobe
  612. bin/nsize
  613. bin/p2dsetstat
  614. bin/parse_fs_lt_log.py
  615. bin/plugout_drive
  616. bin/plugout_ijk
  617. bin/plugout_tt
  618. bin/plugout_tta
  619. bin/prompt_popup
  620. bin/prompt_user
  621. bin/python_module_test.py
  622. bin/quick.alpha.vals.py
  623. bin/quickspec
  624. bin/quotize
  625. bin/rPkgsInstall
  626. bin/rPkgsInstall.R
  627. bin/read_matlab_files.py
  628. bin/realtime_receiver.py
  629. bin/rmz
  630. bin/rotcom
  631. bin/rtfeedme
  632. bin/serial_helper
  633. bin/sfim
  634. bin/siemens_vision
  635. bin/slow_surf_clustsim.py
  636. bin/smooth.R
  637. bin/sqwave
  638. bin/stimband
  639. bin/strblast
  640. bin/suma
  641. bin/suma_change_spec
  642. bin/tedana_wrapper.py
  643. bin/tfim
  644. bin/timing_tool.py
  645. bin/to3d
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  651. bin/uber_ttest.py
  652. bin/unWarpEPI.py
  653. bin/uniq_images
  654. bin/waver
  655. bin/whereami
  656. bin/whirlgif
  657. bin/xmat_tool.py
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  661. include/afni/AFNI_label.h
  662. include/afni/Amalloc.h
  663. include/afni/Aomp.h
  664. include/afni/afni_environ.h
  665. include/afni/afni_suma.h
  666. include/afni/afni_warp.h
  667. include/afni/coxplot.h
  668. include/afni/cs.h
  669. include/afni/cs_qsort_small.h
  670. include/afni/cs_sort_template.h
  671. include/afni/debugtrace.h
  672. include/afni/editvol.h
  673. include/afni/eispack.h
  674. include/afni/f2c.h
  675. include/afni/killer.h
  676. include/afni/list_struct.h
  677. include/afni/machdep.h
  678. include/afni/mcw_glob.h
  679. include/afni/mcw_malloc.h
  680. include/afni/misc_math.h
  681. include/afni/mri_dicom_stuff.h
  682. include/afni/mri_warpfield.h
  683. include/afni/mrilib.h
  684. include/afni/multivector.h
  685. include/afni/nifti1.h
  686. include/afni/nifti2_io.h
  687. include/afni/nifticdf.h
  688. include/afni/niml.h
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  691. include/afni/r_new_resam_dset.h
  692. include/afni/rcmat.h
  693. include/afni/tagset.h
  694. include/afni/thd_atlas.h
  695. include/afni/thd_compress.h
  696. include/afni/thd_iochan.h
  697. include/afni/thd_maker.h
  698. include/afni/thd_ttatlas_CA_EZ.h
  699. include/afni/thd_ttatlas_query.h
  700. include/afni/vecmat.h
  701. include/afni/vol2surf.h
  702. include/afni/znzlib.h
  703. lib/afni/R_io.so
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  705. lib/afni/libSUMA.a
  706. lib/afni/libcoxplot.a
  707. lib/afni/libmri.a
  708. lib/afni/libmrix.a
  709. lib/afni/model_beta.so
  710. lib/afni/model_constant.so
  711. lib/afni/model_conv_PRF.so
  712. lib/afni/model_conv_PRF_6.so
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  715. lib/afni/model_conv_cosine4.so
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  724. lib/afni/model_expMEMRI3.so
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  726. lib/afni/model_gammavar.so
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  729. lib/afni/model_michaelis_menton.so
  730. lib/afni/model_null.so
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  733. lib/afni/model_sinewave_apf.so
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  736. lib/afni/model_trnglwave_ap.so
  737. lib/afni/model_trnglwave_apf.so
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  742. lib/afni/plug_3dsvm.so
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  744. lib/afni/plug_L1fit.so
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  847. lib/python3.7/site-packages/afnipy/ui_xmat.py
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  1646. share/afni/funstuff/splash_yrkim.jpg
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  1650. share/afni/lib_RetroTS/RVT_from_PeakFinder.py
  1651. share/afni/lib_RetroTS/Show_RVT_Peak.py
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  1660. share/afni/meica.libs/mdp/extension.py
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  1689. share/afni/meica.libs/mdp/nodes/rbm_nodes.py
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  1691. share/afni/meica.libs/mdp/nodes/scikits_nodes.py
  1692. share/afni/meica.libs/mdp/nodes/sfa_nodes.py
  1693. share/afni/meica.libs/mdp/nodes/shogun_svm_classifier.py
  1694. share/afni/meica.libs/mdp/nodes/svm_classifiers.py
  1695. share/afni/meica.libs/mdp/nodes/xsfa_nodes.py
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  1698. share/afni/meica.libs/mdp/parallel/parallelflows.py
  1699. share/afni/meica.libs/mdp/parallel/parallelhinet.py
  1700. share/afni/meica.libs/mdp/parallel/parallelnodes.py
  1701. share/afni/meica.libs/mdp/parallel/pp_slave_script.py
  1702. share/afni/meica.libs/mdp/parallel/pp_slave_wrapper.py
  1703. share/afni/meica.libs/mdp/parallel/pp_support.py
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  1707. share/afni/meica.libs/mdp/repo_revision.py
  1708. share/afni/meica.libs/mdp/signal_node.py
  1709. share/afni/meica.libs/mdp/test/__init__.py
  1710. share/afni/meica.libs/mdp/test/_tools.py
  1711. share/afni/meica.libs/mdp/test/benchmark_mdp.py
  1712. share/afni/meica.libs/mdp/test/conftest.py
  1713. share/afni/meica.libs/mdp/test/ide_run.py
  1714. share/afni/meica.libs/mdp/test/run_tests.py
  1715. share/afni/meica.libs/mdp/test/test_AdaptiveCutoffNode.py
  1716. share/afni/meica.libs/mdp/test/test_Convolution2DNode.py
  1717. share/afni/meica.libs/mdp/test/test_CutoffNode.py
  1718. share/afni/meica.libs/mdp/test/test_EtaComputerNode.py
  1719. share/afni/meica.libs/mdp/test/test_FANode.py
  1720. share/afni/meica.libs/mdp/test/test_FDANode.py
  1721. share/afni/meica.libs/mdp/test/test_GaussianClassifier.py
  1722. share/afni/meica.libs/mdp/test/test_GeneralExpansionNode.py
  1723. share/afni/meica.libs/mdp/test/test_GrowingNeuralGasNode.py
  1724. share/afni/meica.libs/mdp/test/test_HistogramNode.py
  1725. share/afni/meica.libs/mdp/test/test_HitParadeNode.py
  1726. share/afni/meica.libs/mdp/test/test_ICANode.py
  1727. share/afni/meica.libs/mdp/test/test_ISFANode.py
  1728. share/afni/meica.libs/mdp/test/test_KNNClassifier.py
  1729. share/afni/meica.libs/mdp/test/test_LinearRegressionNode.py
  1730. share/afni/meica.libs/mdp/test/test_NearestMeanClassifier.py
  1731. share/afni/meica.libs/mdp/test/test_NeuralGasNode.py
  1732. share/afni/meica.libs/mdp/test/test_NoiseNode.py
  1733. share/afni/meica.libs/mdp/test/test_PCANode.py
  1734. share/afni/meica.libs/mdp/test/test_PolynomialExpansionNode.py
  1735. share/afni/meica.libs/mdp/test/test_PreseverDimNode.py
  1736. share/afni/meica.libs/mdp/test/test_RBFExpansionNode.py
  1737. share/afni/meica.libs/mdp/test/test_RBM.py
  1738. share/afni/meica.libs/mdp/test/test_SFA2Node.py
  1739. share/afni/meica.libs/mdp/test/test_SFANode.py
  1740. share/afni/meica.libs/mdp/test/test_TimeDelayNodes.py
  1741. share/afni/meica.libs/mdp/test/test_TimeFrameNode.py
  1742. share/afni/meica.libs/mdp/test/test_VariadicCumulator.py
  1743. share/afni/meica.libs/mdp/test/test_WhiteningNode.py
  1744. share/afni/meica.libs/mdp/test/test_caching.py
  1745. share/afni/meica.libs/mdp/test/test_classifier.py
  1746. share/afni/meica.libs/mdp/test/test_config.py
  1747. share/afni/meica.libs/mdp/test/test_contrib.py
  1748. share/afni/meica.libs/mdp/test/test_copying.py
  1749. share/afni/meica.libs/mdp/test/test_extension.py
  1750. share/afni/meica.libs/mdp/test/test_fastica.py
  1751. share/afni/meica.libs/mdp/test/test_flows.py
  1752. share/afni/meica.libs/mdp/test/test_graph.py
  1753. share/afni/meica.libs/mdp/test/test_hinet.py
  1754. share/afni/meica.libs/mdp/test/test_hinet_generic.py
  1755. share/afni/meica.libs/mdp/test/test_metaclass_and_extensions.py
  1756. share/afni/meica.libs/mdp/test/test_namespace_fixups.py
  1757. share/afni/meica.libs/mdp/test/test_node_covariance.py
  1758. share/afni/meica.libs/mdp/test/test_node_metaclass.py
  1759. share/afni/meica.libs/mdp/test/test_node_operations.py
  1760. share/afni/meica.libs/mdp/test/test_nodes_generic.py
  1761. share/afni/meica.libs/mdp/test/test_parallelclassifiers.py
  1762. share/afni/meica.libs/mdp/test/test_parallelflows.py
  1763. share/afni/meica.libs/mdp/test/test_parallelhinet.py
  1764. share/afni/meica.libs/mdp/test/test_parallelnodes.py
  1765. share/afni/meica.libs/mdp/test/test_pp_local.py
  1766. share/afni/meica.libs/mdp/test/test_pp_remote.py
  1767. share/afni/meica.libs/mdp/test/test_process_schedule.py
  1768. share/afni/meica.libs/mdp/test/test_reload.py
  1769. share/afni/meica.libs/mdp/test/test_schedule.py
  1770. share/afni/meica.libs/mdp/test/test_scikits.py
  1771. share/afni/meica.libs/mdp/test/test_seed.py
  1772. share/afni/meica.libs/mdp/test/test_svm_classifier.py
  1773. share/afni/meica.libs/mdp/test/test_tempdir.py
  1774. share/afni/meica.libs/mdp/test/test_utils.py
  1775. share/afni/meica.libs/mdp/test/test_utils_generic.py
  1776. share/afni/meica.libs/mdp/utils/__init__.py
  1777. share/afni/meica.libs/mdp/utils/_ordered_dict.py
  1778. share/afni/meica.libs/mdp/utils/_symeig.py
  1779. share/afni/meica.libs/mdp/utils/covariance.py
  1780. share/afni/meica.libs/mdp/utils/introspection.py
  1781. share/afni/meica.libs/mdp/utils/progress_bar.py
  1782. share/afni/meica.libs/mdp/utils/quad_forms.py
  1783. share/afni/meica.libs/mdp/utils/routines.py
  1784. share/afni/meica.libs/mdp/utils/slideshow.css
  1785. share/afni/meica.libs/mdp/utils/slideshow.py
  1786. share/afni/meica.libs/mdp/utils/templet.py
  1787. share/afni/meica.libs/mdp/utils/temporarydir.py
  1788. share/afni/meica.libs/nibabel/COMMIT_INFO.txt
  1789. share/afni/meica.libs/nibabel/__init__.py
  1790. share/afni/meica.libs/nibabel/affines.py
  1791. share/afni/meica.libs/nibabel/analyze.py
  1792. share/afni/meica.libs/nibabel/arrayproxy.py
  1793. share/afni/meica.libs/nibabel/arraywriters.py
  1794. share/afni/meica.libs/nibabel/batteryrunners.py
  1795. share/afni/meica.libs/nibabel/benchmarks/__init__.py
  1796. share/afni/meica.libs/nibabel/benchmarks/bench_load_save.py
  1797. share/afni/meica.libs/nibabel/casting.py
  1798. share/afni/meica.libs/nibabel/checkwarns.py
  1799. share/afni/meica.libs/nibabel/data.py
  1800. share/afni/meica.libs/nibabel/dft.py
  1801. share/afni/meica.libs/nibabel/ecat.py
  1802. share/afni/meica.libs/nibabel/environment.py
  1803. share/afni/meica.libs/nibabel/eulerangles.py
  1804. share/afni/meica.libs/nibabel/externals/__init__.py
  1805. share/afni/meica.libs/nibabel/externals/netcdf.py
  1806. share/afni/meica.libs/nibabel/externals/tests/__init__.py
  1807. share/afni/meica.libs/nibabel/externals/tests/test_netcdf.py
  1808. share/afni/meica.libs/nibabel/fileholders.py
  1809. share/afni/meica.libs/nibabel/filename_parser.py
  1810. share/afni/meica.libs/nibabel/freesurfer/__init__.py
  1811. share/afni/meica.libs/nibabel/freesurfer/io.py
  1812. share/afni/meica.libs/nibabel/freesurfer/mghformat.py
  1813. share/afni/meica.libs/nibabel/freesurfer/tests/__init__.py
  1814. share/afni/meica.libs/nibabel/freesurfer/tests/test_io.py
  1815. share/afni/meica.libs/nibabel/freesurfer/tests/test_mghformat.py
  1816. share/afni/meica.libs/nibabel/funcs.py
  1817. share/afni/meica.libs/nibabel/gifti/__init__.py
  1818. share/afni/meica.libs/nibabel/gifti/gifti.py
  1819. share/afni/meica.libs/nibabel/gifti/giftiio.py
  1820. share/afni/meica.libs/nibabel/gifti/parse_gifti_fast.py
  1821. share/afni/meica.libs/nibabel/gifti/tests/__init__.py
  1822. share/afni/meica.libs/nibabel/gifti/tests/data/ascii.gii
  1823. share/afni/meica.libs/nibabel/gifti/tests/data/base64bin.gii
  1824. share/afni/meica.libs/nibabel/gifti/tests/data/gzipbase64.gii
  1825. share/afni/meica.libs/nibabel/gifti/tests/data/label.gii
  1826. share/afni/meica.libs/nibabel/gifti/tests/data/rh.aparc.annot.gii
  1827. share/afni/meica.libs/nibabel/gifti/tests/data/rh.shape.curv.gii
  1828. share/afni/meica.libs/nibabel/gifti/tests/test_gifti.py
  1829. share/afni/meica.libs/nibabel/gifti/tests/test_giftiio.py
  1830. share/afni/meica.libs/nibabel/gifti/util.py
  1831. share/afni/meica.libs/nibabel/imageclasses.py
  1832. share/afni/meica.libs/nibabel/imageglobals.py
  1833. share/afni/meica.libs/nibabel/info.py
  1834. share/afni/meica.libs/nibabel/loadsave.py
  1835. share/afni/meica.libs/nibabel/minc.py
  1836. share/afni/meica.libs/nibabel/nicom/__init__.py
  1837. share/afni/meica.libs/nibabel/nicom/csareader.py
  1838. share/afni/meica.libs/nibabel/nicom/dicomreaders.py
  1839. share/afni/meica.libs/nibabel/nicom/dicomwrappers.py
  1840. share/afni/meica.libs/nibabel/nicom/dwiparams.py
  1841. share/afni/meica.libs/nibabel/nicom/structreader.py
  1842. share/afni/meica.libs/nibabel/nicom/tests/__init__.py
  1843. share/afni/meica.libs/nibabel/nicom/tests/data/csa2_b0.bin
  1844. share/afni/meica.libs/nibabel/nicom/tests/data/csa2_b1000.bin
  1845. share/afni/meica.libs/nibabel/nicom/tests/data/csa2_zero_len.bin.gz
  1846. share/afni/meica.libs/nibabel/nicom/tests/data/csa_slice_norm.dcm
  1847. share/afni/meica.libs/nibabel/nicom/tests/data/siemens_dwi_0.dcm.gz
  1848. share/afni/meica.libs/nibabel/nicom/tests/data/siemens_dwi_1000.dcm.gz
  1849. share/afni/meica.libs/nibabel/nicom/tests/data_pkgs.py
  1850. share/afni/meica.libs/nibabel/nicom/tests/test_csareader.py
  1851. share/afni/meica.libs/nibabel/nicom/tests/test_dicomreaders.py
  1852. share/afni/meica.libs/nibabel/nicom/tests/test_dicomwrappers.py
  1853. share/afni/meica.libs/nibabel/nicom/tests/test_dwiparams.py
  1854. share/afni/meica.libs/nibabel/nicom/tests/test_structreader.py
  1855. share/afni/meica.libs/nibabel/nifti1.py
  1856. share/afni/meica.libs/nibabel/onetime.py
  1857. share/afni/meica.libs/nibabel/optpkg.py
  1858. share/afni/meica.libs/nibabel/orientations.py
  1859. share/afni/meica.libs/nibabel/parrec.py
  1860. share/afni/meica.libs/nibabel/pkg_info.py
  1861. share/afni/meica.libs/nibabel/py3k.py
  1862. share/afni/meica.libs/nibabel/quaternions.py
  1863. share/afni/meica.libs/nibabel/spatialimages.py
  1864. share/afni/meica.libs/nibabel/spm2analyze.py
  1865. share/afni/meica.libs/nibabel/spm99analyze.py
  1866. share/afni/meica.libs/nibabel/testing/__init__.py
  1867. share/afni/meica.libs/nibabel/tests/__init__.py
  1868. share/afni/meica.libs/nibabel/tests/data/0.dcm
  1869. share/afni/meica.libs/nibabel/tests/data/1.dcm
  1870. share/afni/meica.libs/nibabel/tests/data/analyze.hdr
  1871. share/afni/meica.libs/nibabel/tests/data/example4d.nii.gz
  1872. share/afni/meica.libs/nibabel/tests/data/nifti1.hdr
  1873. share/afni/meica.libs/nibabel/tests/data/test.mgz
  1874. share/afni/meica.libs/nibabel/tests/data/tiny.mnc
  1875. share/afni/meica.libs/nibabel/tests/data/tinypet.v
  1876. share/afni/meica.libs/nibabel/tests/test_affines.py
  1877. share/afni/meica.libs/nibabel/tests/test_analyze.py
  1878. share/afni/meica.libs/nibabel/tests/test_arrayproxy.py
  1879. share/afni/meica.libs/nibabel/tests/test_arraywriters.py
  1880. share/afni/meica.libs/nibabel/tests/test_batteryrunners.py
  1881. share/afni/meica.libs/nibabel/tests/test_casting.py
  1882. share/afni/meica.libs/nibabel/tests/test_checkwarns.py
  1883. share/afni/meica.libs/nibabel/tests/test_data.py
  1884. share/afni/meica.libs/nibabel/tests/test_dft.py
  1885. share/afni/meica.libs/nibabel/tests/test_ecat.py
  1886. share/afni/meica.libs/nibabel/tests/test_endiancodes.py
  1887. share/afni/meica.libs/nibabel/tests/test_environment.py
  1888. share/afni/meica.libs/nibabel/tests/test_euler.py
  1889. share/afni/meica.libs/nibabel/tests/test_filehandles.py
  1890. share/afni/meica.libs/nibabel/tests/test_fileholders.py
  1891. share/afni/meica.libs/nibabel/tests/test_filename_parser.py
  1892. share/afni/meica.libs/nibabel/tests/test_files_interface.py
  1893. share/afni/meica.libs/nibabel/tests/test_floating.py
  1894. share/afni/meica.libs/nibabel/tests/test_funcs.py
  1895. share/afni/meica.libs/nibabel/tests/test_image_load_save.py
  1896. share/afni/meica.libs/nibabel/tests/test_minc.py
  1897. share/afni/meica.libs/nibabel/tests/test_nifti1.py
  1898. share/afni/meica.libs/nibabel/tests/test_orientations.py
  1899. share/afni/meica.libs/nibabel/tests/test_quaternions.py
  1900. share/afni/meica.libs/nibabel/tests/test_recoder.py
  1901. share/afni/meica.libs/nibabel/tests/test_round_trip.py
  1902. share/afni/meica.libs/nibabel/tests/test_scaling.py
  1903. share/afni/meica.libs/nibabel/tests/test_spatialimages.py
  1904. share/afni/meica.libs/nibabel/tests/test_spm2analyze.py
  1905. share/afni/meica.libs/nibabel/tests/test_spm99analyze.py
  1906. share/afni/meica.libs/nibabel/tests/test_trackvis.py
  1907. share/afni/meica.libs/nibabel/tests/test_utils.py
  1908. share/afni/meica.libs/nibabel/tests/test_wrapstruct.py
  1909. share/afni/meica.libs/nibabel/tmpdirs.py
  1910. share/afni/meica.libs/nibabel/trackvis.py
  1911. share/afni/meica.libs/nibabel/tripwire.py
  1912. share/afni/meica.libs/nibabel/volumeutils.py
  1913. share/afni/meica.libs/nibabel/wrapstruct.py
  1914. share/afni/meica.libs/select_model.py
  1915. share/afni/meica.libs/t2smap.py
  1916. share/afni/meica.libs/tedana.py
  1917. share/afni/shiny/3dMVM_validator_shiny/afni_funk.R
  1918. share/afni/shiny/3dMVM_validator_shiny/global.R
  1919. share/afni/shiny/3dMVM_validator_shiny/server.R
  1920. share/afni/shiny/3dMVM_validator_shiny/stat_functions.R
  1921. share/afni/shiny/3dMVM_validator_shiny/ui.R
  1922. share/afni/shiny/ClustExp_ShinyTemplate/afni_funk.R
  1923. share/afni/shiny/ClustExp_ShinyTemplate/data/disco_ttest_GroupTable.csv
  1924. share/afni/shiny/ClustExp_ShinyTemplate/data/disco_ttest_StatInfo.csv
  1925. share/afni/shiny/ClustExp_ShinyTemplate/data/disco_ttest_p_uncor_0.005_clusters.csv
  1926. share/afni/shiny/ClustExp_ShinyTemplate/data/disco_ttest_p_uncor_0.005_mean.csv
  1927. share/afni/shiny/ClustExp_ShinyTemplate/data/disco_ttest_p_uncor_0.005_peak.csv
  1928. share/afni/shiny/ClustExp_ShinyTemplate/global.R
  1929. share/afni/shiny/ClustExp_ShinyTemplate/lib_Rafni.R
  1930. share/afni/shiny/ClustExp_ShinyTemplate/server.R
  1931. share/afni/shiny/ClustExp_ShinyTemplate/stat_functions.R
  1932. share/afni/shiny/ClustExp_ShinyTemplate/ui.R
  1933. share/afni/shiny/FATCAT_matplot_shiny/global.R
  1934. share/afni/shiny/FATCAT_matplot_shiny/hclust_methods.csv
  1935. share/afni/shiny/FATCAT_matplot_shiny/server.R
  1936. share/afni/shiny/FATCAT_matplot_shiny/stat_methods.csv
  1937. share/afni/shiny/FATCAT_matplot_shiny/ui.R
  1938. share/afni/shiny/misc/OmicCircos_pkg_install.R
  1939. share/doc/afni/CMakeLists.txt
  1940. share/doc/afni/README
  1941. share/doc/afni/README.Ifile
  1942. share/doc/afni/README.afnigui
  1943. share/doc/afni/README.atlas_building
  1944. share/doc/afni/README.attributes
  1945. share/doc/afni/README.bzip2
  1946. share/doc/afni/README.changes
  1947. share/doc/afni/README.compression
  1948. share/doc/afni/README.copyright
  1949. share/doc/afni/README.driver
  1950. share/doc/afni/README.environment
  1951. share/doc/afni/README.func_types
  1952. share/doc/afni/README.notes
  1953. share/doc/afni/README.permtest
  1954. share/doc/afni/README.plugouts
  1955. share/doc/afni/README.realtime
  1956. share/doc/afni/README.registration
  1957. share/doc/afni/README.render_scripts
  1958. share/doc/afni/README.roi
  1959. share/doc/afni/README.setup
  1960. share/doc/afni/README.volreg
  1961. share/doc/afni/README.web
  1962. share/doc/afni/README.ziad
Collapse this list.
Dependency lines:
  • afni>0:science/afni
Conflicts:
CONFLICTS:
  • im-[0-9]*
  • nifticlib-[0-9]*
  • open-usp-tukubai-[0-9]*
Conflicts Matches:
There are no Conflicts Matches for this port. This is usually an error.
To install the port: cd /usr/ports/science/afni/ && make install clean
To add the package: pkg install afni
PKGNAME: afni
Flavors: there is no flavor information for this port.
distinfo:
Packages:
afni
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd6420.1.0619.1.20_4
FreeBSD:11:i38620.1.0619.1.20_4
FreeBSD:12:aarch64--
FreeBSD:12:amd6420.1.0619.1.20_4
FreeBSD:12:i38620.1.0619.1.20_4
FreeBSD:13:aarch64--
FreeBSD:13:amd6420.1.06-
FreeBSD:13:i38620.1.06-
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. gm4 : devel/m4
  2. R : math/R
  3. R-cran-lme4>0 : math/R-cran-lme4
  4. R-cran-snow>0 : science/R-cran-snow
  5. R-cran-psych>0 : math/R-cran-psych
  6. msgfmt : devel/gettext-tools
  7. gmake>=4.3 : devel/gmake
  8. python3.7 : lang/python37
  9. xorgproto>=0 : x11/xorgproto
  10. xorgproto>=0 : x11/xorgproto
  11. dri.pc : graphics/mesa-dri
  12. x11.pc : x11/libX11
  13. xext.pc : x11/libXext
  14. xi.pc : x11/libXi
  15. xmu.pc : x11-toolkits/libXmu
  16. xt.pc : x11-toolkits/libXt
  17. xpm.pc : x11/libXpm
  18. perl5>=5.30.r1<5.31 : lang/perl5.30
Runtime dependencies:
  1. endian : sysutils/endian
  2. mpeg_encode : multimedia/mpeg_encode
  3. qhull : math/qhull5
  4. R : math/R
  5. R-cran-lme4>0 : math/R-cran-lme4
  6. R-cran-snow>0 : science/R-cran-snow
  7. R-cran-psych>0 : math/R-cran-psych
  8. cjpeg : graphics/jpeg-turbo
  9. python3.7 : lang/python37
  10. dri.pc : graphics/mesa-dri
  11. x11.pc : x11/libX11
  12. xext.pc : x11/libXext
  13. xi.pc : x11/libXi
  14. xmu.pc : x11-toolkits/libXmu
  15. xt.pc : x11-toolkits/libXt
  16. xpm.pc : x11/libXpm
  17. perl5>=5.30.r1<5.31 : lang/perl5.30
Library dependencies:
  1. libexpat.so : textproc/expat2
  2. libf2c.so : lang/f2c
  3. libgsl.so : math/gsl
  4. libnetcdff.so : science/netcdf-fortran
  5. libxml2.so : textproc/libxml2
  6. libXm.so : x11-toolkits/open-motif
  7. libnetpbm.so : graphics/netpbm
  8. libintl.so : devel/gettext-runtime
  9. libGL.so : graphics/mesa-libs
  10. libGLU.so : graphics/libGLU
  11. libglib-2.0.so : devel/glib20
  12. libintl.so : devel/gettext-runtime
  13. libiconv.so : converters/libiconv
  14. libXm.so.4 : x11-toolkits/open-motif
There are no ports dependent upon this port

Configuration Options

USES:

Master Sites:
  1. https://codeload.github.com/afni/afni/tar.gz/AFNI_20.1.06?dummy=/

Number of commits found: 85

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
18 May 2020 01:29:41
Original commit files touched by this commit  20.1.06
Revision:535703
linimon search for other commits by this committer
Mark as BROKEN on powerpc64:

  ./predicates_init.c:46: error: implicit declaration of function 'fpsetprec'

While here, remove OBE sparc64 stanza.
06 May 2020 08:22:40
Original commit files touched by this commit  20.1.06
Revision:534153
fernape search for other commits by this committer
science/afni: update to 20.1.06

Reported by:	portscout
05 May 2020 16:07:54
Original commit files touched by this commit  20.1.05_1
Revision:534095
jrm search for other commits by this committer
math/R: Update to version 4.0.0

Upstream changes:
https://stat.ethz.ch/pipermail/r-announce/2020/000653.html

Also bump PORTREVISION of ports that depend on math/R.

Submitted by:	wen (in part)
Reviewed by:	jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry
Differential Revision:	https://reviews.freebsd.org/D24572
30 Apr 2020 15:03:17
Original commit files touched by this commit  20.1.05
Revision:533460
fernape search for other commits by this committer
science/afni: update to 20.1.05

Reported by:	portscout
29 Apr 2020 06:55:48
Original commit files touched by this commit  20.1.03
Revision:533317
fernape search for other commits by this committer
science/afni: update to 20.1.03

Reported by:	portscout
23 Apr 2020 06:34:33
Original commit files touched by this commit  20.1.02
Revision:532646
fernape search for other commits by this committer
science/afni: update to 20.1.02

Reported by:	portscout
20 Apr 2020 12:21:49
Original commit files touched by this commit  20.1.01
Revision:532202
jwb search for other commits by this committer
science/afni: Upgrade to 20.1.02

Added some common R-cran run dependencies
Removed obsolete reinplace patches
Improved do-install to better fit filesystem hierarchy
Releasing maintainership as I no longer work with any AFNI users

Reported by:    portscout
25 Oct 2019 23:41:34
Original commit files touched by this commit  19.1.20_4
Revision:515671
tcberner search for other commits by this committer
math/gsl: update to 2.6

- math/p5-Math-GSL does not seem to have any upstream activity to make it work
with this version -> mark it broken
  - this also breaks the two consumers of this port

- biology/gemma: has a conflict with cblas, and is makred broken.

PR:		241363
Exp-run by:	antoine
28 Sep 2019 10:56:15
Original commit files touched by this commit  19.1.20_3
Revision:513115
zeising search for other commits by this committer
science/afni: Remove dependency on libXp

Remove dependency on libXp from science/afni, it is not needed, and libXp is
being deprecated.
Remove deprecation from science/afni
27 Sep 2019 16:18:59
Original commit files touched by this commit  19.1.20_2
Revision:513046
zeising search for other commits by this committer
Deprecate x11/libXp, it is deprecated upstream

Deprecate x11/libXp, since it is about to be deprecated upstream.  Do *not*
yet set a removal date for x11/libXp, this will be decided later, once most
dependencies are fixed.
Deprecate all ports depending on x11/libXp.
* astro/xephem
* audio/xmcd
* audio/xmmix
* biology/ncbi-toolkit
* deskutils/xmdiary
* ftp/llnlxdir
* ftp/llnlxftp
* graphics/SciPlot
* misc/xtar
* multimedia/mpeg2play
* science/afni
* textproc/mgdiff

Sprinkle USES=xorg as needed.

Discussed with:	bapt
31 Aug 2019 17:11:57
Original commit files touched by this commit  19.1.20_2
Revision:510405
sunpoet search for other commits by this committer
Bump PORTREVISION for science/netcdf-fortran shlib change
14 Aug 2019 12:16:13
Original commit files touched by this commit  19.1.20_1
Revision:508909
mat search for other commits by this committer
Convert to UCL & cleanup pkg-message (categories s)
26 Jul 2019 20:46:57
Original commit files touched by this commit  19.1.20_1
Revision:507372
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
18 Jun 2019 19:00:55
Original commit files touched by this commit  19.1.20
Revision:504496
jwb search for other commits by this committer
science/afni: Upgrade to 19.1.20

Upstreamed FreeBSD patches, other minor fixes and enhancements

Reported by:    portscout, Rick Reynolds (NIH)
08 Jun 2019 19:14:18
Original commit files touched by this commit  19.1.18
Revision:503747
jwb search for other commits by this committer
science/afni: Upgrade to 19.1.18

Minor bugfixes/enhancements
01 Jun 2019 12:59:52
Original commit files touched by this commit  19.1.14
Revision:503233
jwb search for other commits by this committer
science/afni: Upgrade to 19.1.14

Minor bug fixes and enhancements, some FreeBSD patches upstreamed
22 May 2019 12:44:17
Original commit files touched by this commit  19.1.10
Revision:502266
jwb search for other commits by this committer
science/afni: Upgrade to 19.1.10

Rapid response from upstream on reported issue.  Additional patches to be
upstreamed in next release.
20 May 2019 19:35:57
Original commit files touched by this commit  19.1.08
Revision:502158
jwb search for other commits by this committer
science/afni: Upgrade to 19.1.08

Switch from personal dist snapshots to Github releases
Improve staging procedure to preserve results of build phase
Temporarily use bundled GLw pending fix of libglw port
12 Dec 2018 01:35:36
Original commit files touched by this commit  2015.11.13_8
Revision:487272
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
10 Sep 2018 13:14:52
Original commit files touched by this commit  2015.11.13_7
Revision:479406
mat search for other commits by this committer
Add DOCS options to ports that should have one.

Also various fixes related to said option.

PR:		230864
Submitted by:	mat
exp-runs by:	antoine
23 Jun 2018 08:27:14
Original commit files touched by this commit  2015.11.13_7
Revision:473116
tcberner search for other commits by this committer
Update math/gsl to 2.5

PR:		229067
10 Mar 2018 17:46:06
Original commit files touched by this commit  2015.11.13_6
Revision:464084
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
31 Jan 2018 01:07:08
Original commit files touched by this commit  2015.11.13_5
Revision:460452
jwb search for other commits by this committer
Multiple ports:
Change maintainer email bacon4000@gmail.com to jwb@FreeBSD.org
Remove Created by comments for same user

Approved by: jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D14128
19 Dec 2017 14:41:29
Original commit files touched by this commit  2015.11.13_5
Revision:456719
linimon search for other commits by this committer
Mark more recently failing ports broken on aarch64.

While here, pet portlint and reformat some other BROKEN statements.

Approved by:	portmgr (tier-2 blanket)
24 Jul 2017 18:26:39
Original commit files touched by this commit  2015.11.13_5
Revision:446540
pawel search for other commits by this committer
After r446199 libR.so has SONAME and was made visible for
consumer ports. Register correct dependency by using LIB_DEPENDS
instead of BUILD|RUN_DEPENDS dance.

math/rkward-kde4:
- Add 2 missing files to pkg-plist also

PR:		219776
Submitted by:	myself
Approved by:	maintainers timeouts
03 Jul 2017 20:38:12
Original commit files touched by this commit  2015.11.13_5
Revision:444988
tcberner search for other commits by this committer
Update math/gsl to 2.4

Exp-Run by:	antoine
PR:		220408
23 May 2017 05:03:16
Original commit files touched by this commit  2015.11.13_4
Revision:441503
rezny search for other commits by this committer
Revision bump of all ports with USE_GL after consolidation of mesa-libs

Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D10845
04 May 2017 05:26:01
Original commit files touched by this commit  2015.11.13_3
Revision:440090
tcberner search for other commits by this committer
Fix shebangs

Reviewed by:		mat
Approved by:		mat (mentor)
Differential Revision:	https://reviews.freebsd.org/D10527
02 May 2017 05:26:40
Original commit files touched by this commit  2015.11.13_2
Revision:439928
tcberner search for other commits by this committer
Update math/gsl to 2.3

This release introduces some new features and fixes several bugs:
	http://savannah.gnu.org/forum/forum.php?forum_id=8751

* update to 2.3 and take maintainership
* update math/py-gsl to 2.2.0 for gsl2 support
* update math/rubygem-rb-gsl to 2.1.0.2 for gsl2 support

PR:		218952
Exp-run by:	antoine
Reviewed by:	mat, rakuco
Approved by:	rakuco (mentor)
Differential Revision:	https://reviews.freebsd.org/D10522
29 Nov 2016 21:15:41
Original commit files touched by this commit  2015.11.13_1
Revision:427397
jrm search for other commits by this committer
science/afni: Use BUILD_DEPENDS/RUN_DEPENDS instead of LIB_DEPENDS for
math/R, because R may be configured without libR.

While here, fix some stage-qa warnings about indirect dependencies.

Reviewed by:	AMDmi3
Approved by:	bacon4000@gmail.com (maintainer) swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D8649
19 May 2016 11:09:14
Original commit files touched by this commit  2015.11.13
Revision:415503
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-messages

Approved by:	portmgr blanket
19 May 2016 10:57:35
Original commit files touched by this commit  2015.11.13
Revision:415501
amdmi3 search for other commits by this committer
- Fix trailing whitespace in Makefiles

Approved by:	portmgr blanket
01 Apr 2016 14:25:18
Original commit files touched by this commit  2015.11.13
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
27 Feb 2016 22:03:30
Original commit files touched by this commit  2015.11.13
Revision:409693
rakuco search for other commits by this committer
Update to 2015.11.13.

Upgrade to a more recent snapshot, and stop requiring GCC.

PR:		206930
Submitted by:	Jason Bacon <bacon4000@gmail.com> (maintainer)
11 Dec 2015 08:48:57
Original commit files touched by this commit  2012.04.17.2129_12
Revision:403506
miwi search for other commits by this committer
- Update maintainer mail address
- Update/Remove MASTER_SITE

PR:		204755
Submitted by:	 jwbacon@tds.net (maintainer)
Approved by:	mat (mentor)
Differential Revision:	D4493
01 Oct 2015 21:34:36
Original commit files touched by this commit  2012.04.17.2129_12
Revision:398387
amdmi3 search for other commits by this committer
- Pet portlint
- Switch to options helpers

Approved by:	portmgr blanket
22 Jun 2015 18:33:22
Original commit files touched by this commit  2012.04.17.2129_12
Revision:390310
antoine search for other commits by this committer
Convert to USES=jpeg
24 Jan 2015 19:27:28
Original commit files touched by this commit  2012.04.17.2129_12
Revision:377815
antoine search for other commits by this committer
Fix some _DEPENDS
12 Nov 2014 18:48:53
Original commit files touched by this commit  2012.04.17.2129_12
Revision:372500
antoine search for other commits by this committer
Cleanup plist
10 Sep 2014 20:50:37
Original commit files touched by this commit  2012.04.17.2129_11
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
17 Aug 2014 13:09:56
Original commit files touched by this commit  2012.04.17.2129_10
Revision:365182
tijl search for other commits by this committer
math/gsl:
- Add USES=libtool and bump dependent ports
- Add USES=pathfix and INSTALL_TARGET=install-strip

Approved by:	portmgr (implicit, bump unstage port)
15 Aug 2014 21:08:21
Original commit files touched by this commit  2012.04.17.2129_9
Revision:365049
sunpoet search for other commits by this committer
- Update to 4.4.0
- Bump PORTREVISION for science/netcdf-fortran shlib change [1]

Changes:	https://github.com/Unidata/netcdf-fortran/blob/master/RELEASE_NOTES.md
Approved by:	portmgr (implicit, unstaged port) [1]
15 Jul 2014 16:51:35
Original commit files touched by this commit  2012.04.17.2129_8
Revision:361975
adamw search for other commits by this committer
Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.
25 Jun 2014 05:35:32
Original commit files touched by this commit  2012.04.17.2129_8
Revision:359185
bapt search for other commits by this committer
Convert GMAKE to MAKE_CMD
Please note that lots of invocation of MAKE_CMD here are wrong as they do not
properly respect MAKE_ENV and friends

With hat:	portmgr
17 Jun 2014 14:41:05
Original commit files touched by this commit  2012.04.17.2129_8
Revision:358125
rene search for other commits by this committer
science/afni: bring back into shape.

- Stage support
- Unexpire
- Add license (GPLv2)
- Use modern LIB_DEPENDS
- Explicitly mention dependencies
- Add CONFLICTS with im-*, nifticlib-* and open-usp-tukubai-*
- Use perl5 and GCC
- Tidy pkg-descr
- Clean up pkg-plist
- Bump PORTREVISION

While here:
- Use BROKEN_arch to avoid including bsd.port.pre.mk
- Use PORT_OPTIONS:MDOCS instead of NOPORTDOCS
- Remove obsolete post-install target

PR:		186988
Submitted by:	maintainer (jwbacon@tds.net)
13 May 2014 16:59:52
Original commit files touched by this commit  2012.04.17.2129_7
Revision:353973
antoine search for other commits by this committer
Deprecate ports BROKEN for more than 6 months

With hat:	portmgr
10 Mar 2014 20:55:22
Original commit files touched by this commit  2012.04.17.2129_7
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
13 Nov 2013 08:19:35
Original commit files touched by this commit  2012.04.17.2129_6
Revision:333659
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
26 Oct 2013 00:52:36
Original commit files touched by this commit  2012.04.17.2129_6
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  2012.04.17.2129_5
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
26 Aug 2013 16:06:38
Original commit files touched by this commit  2012.04.17.2129_5
Revision:325401
bf search for other commits by this committer
Update math/gsl to 1.16 and adjust some dependent ports
10 Jul 2013 07:00:44
Original commit files touched by this commit  2012.04.17.2129_4
Revision:322622  Sanity Test Failure
bapt search for other commits by this committer
Convert from USE_MOTIF to USES=motif
While here:
- Trim headers
- Convert USE_GMAKE to USES=gmake
- Remove indefinite article from comment
28 May 2013 15:15:06
Original commit files touched by this commit  2012.04.17.2129_4
Revision:319316
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
27 Apr 2013 18:25:25
Original commit files touched by this commit  2012.04.17.2129_3
Revision:316683
mva search for other commits by this committer
- Convert USE_ICONV=yes to USES=iconv
- Change USE_GNOME=pkgconfig|gnomehack to USES=pathfix|pkgconfig and
  USE_GETTEXT=yes to USES=gettext while here
07 Mar 2013 04:21:35
Original commit files touched by this commit  2012.04.17.2129_3
Revision:313562
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
04 Jan 2013 17:51:39
Original commit files touched by this commit  2012.04.17.2129_2
Revision:309935
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
24 Jun 2012 21:53:38
Original commit files touched by this commit  2012.04.17.2129_1

dougb search for other commits by this committer
s/X11BASE/LOCALBASE/, or equivalent.

The X11BASE variable is long gone, however these ports were not updated.
01 Jun 2012 05:26:28
Original commit files touched by this commit  2012.04.17.2129_1

dinoex search for other commits by this committer
- update png to 1.5.10
11 May 2012 17:05:09
Original commit files touched by this commit  2012.04.17.2129

pawel search for other commits by this committer
- Update to build 2012-04-17 [1]
- Projest has new homepage [1]
- Mark MAKE_JOBS_UNSAFE

PR:             ports/167651 [1]
Submitted by:   Jason Bacon <jwbacon@tds.net> (maintainer) [1]
24 Oct 2011 09:11:38
Original commit files touched by this commit  2008.01.02.1043_6

dougb search for other commits by this committer
The vast majority of pkg-descr files had the following format when they
had both lines:

Author: ...
WWW: ....

So standardize on that, and move them to the end of the file when necessary.

Also fix some more whitespace, and remove more "signature tags" of varying
forms, like -- name, etc.

s/AUTHOR/Author/

A few other various formatting issues
03 Jul 2011 13:22:25
Original commit files touched by this commit  2008.01.02.1043_6

ohauer search for other commits by this committer
 - remove MD5
02 May 2011 12:44:53
Original commit files touched by this commit  2008.01.02.1043_6

makc search for other commits by this committer
Bump PORTREVISION after open-mofit update
31 May 2010 02:01:56
Original commit files touched by this commit  2008.01.02.1043_5

ade search for other commits by this committer
Bounce PORTREVISION for gettext-related ports.  Have fun, ya'll.
28 Mar 2010 06:47:48
Original commit files touched by this commit  2008.01.02.1043_4

dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
05 Feb 2010 11:46:55
Original commit files touched by this commit  2008.01.02.1043_3

dinoex search for other commits by this committer
- update to jpeg-8
19 Jun 2009 20:06:31
Original commit files touched by this commit  2008.01.02.1043_2

linimon search for other commits by this committer
Update maintainer's email address.  Had already been done for his
other ports.
24 Jan 2009 10:02:09
Original commit files touched by this commit  2008.01.02.1043_2

flz search for other commits by this committer
Fix science/afni after X.org 7.4 import (needs Xi).

Reported by:    pointyhat (via pav)
25 Jul 2008 12:24:09
Original commit files touched by this commit  2008.01.02.1043_1

pav search for other commits by this committer
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default
MAKE_ENV
06 Jun 2008 13:59:05
Original commit files touched by this commit  2008.01.02.1043_1

edwin search for other commits by this committer
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
19 Apr 2008 17:56:05
Original commit files touched by this commit  2008.01.02.1043
  Sanity Test Failure
miwi search for other commits by this committer
- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)
28 Jan 2008 16:42:02
Original commit files touched by this commit  2008.01.02.1043

tabthorpe search for other commits by this committer
- Update to 2008.01.02.1043

PR:             ports/119961
Submitted by:   Jason Bacon <bacon smithers.neuro.mcw.edu> (maintainer)
21 Jun 2007 12:33:48
Original commit files touched by this commit  2007.06.15.1339

miwi search for other commits by this committer
- Update to 2007.06.15.1339
- Unbreak

PR:             113887
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
10 Jun 2007 04:04:38
Original commit files touched by this commit  2007.04.18.1830_1

kris search for other commits by this committer
BROKEN: Does not compile
19 May 2007 20:32:57
Original commit files touched by this commit  2007.04.18.1830_1

flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
21 Apr 2007 13:37:39
Original commit files touched by this commit  2007.04.18.1830

miwi search for other commits by this committer
- Update to 2007.04.18.1830
- Respect X11BASE

PR:             111890
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
01 Dec 2006 14:07:50
Original commit files touched by this commit  2006.06.30.1332

laszlof search for other commits by this committer
Respect X11BASE

PR:     ports/106101
Submitted by:   self
Approved by:    Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
Reported by:    pointyhat
24 Sep 2006 18:24:09
Original commit files touched by this commit  2006.06.30.1332

pav search for other commits by this committer
- Fix plugins
- Update to 2006.06.30.1332

PR:             ports/103318
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
06 Jul 2006 21:57:06
Original commit files touched by this commit  2006.03.21.1314

linimon search for other commits by this committer
Remove backquote from BROKEN string to avoid upsetting portsmon code.

Hat:            portmgr
25 May 2006 14:23:50
Original commit files touched by this commit  2006.03.21.1314

arved search for other commits by this committer
Update to 2006.03.21.1314

PR:             97404
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
15 Apr 2006 18:24:01
Original commit files touched by this commit  2005.12.30.0934.2

arved search for other commits by this committer
Update to 2005.12.30.0934.2

PR:             94302
Submitted by:   maintainer
13 Feb 2006 10:24:18
Original commit files touched by this commit  2005.12.30.0934

vd search for other commits by this committer
Change `NOT_FOR_ARCHS' with `if ARCH then BROKEN'

Noticed by:     danfe
Approved by:    garga (mentor)
09 Feb 2006 15:58:54
Original commit files touched by this commit  2005.12.30.0934

vd search for other commits by this committer
Mark NOT_FOR_ARCHS=sparc64, maintainer did not fix the build for 7 days
after kris' mail

Approved by:    garga (mentor)
30 Jan 2006 10:03:13
Original commit files touched by this commit  2005.12.30.0934

vd search for other commits by this committer
Changes to the port:
Author fixed the problem with filename versioning by placing filenames
without version in their name in a subdirectory on the web server.

Changes to the software itself:
-DPIC -fPIC used only for amd64 and ia64, suggested by kris

Approved by:    garga (mentor)
26 Jan 2006 09:35:45
Original commit files touched by this commit  2005.12.30.0934

vd search for other commits by this committer
Update Makefile.FreeBSD_PORT's checksum.

-DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it
compile on amd64.

Approved by:    garga (mentor)
25 Jan 2006 17:34:35
Original commit files touched by this commit  2005.12.30.0934

vd search for other commits by this committer
Add new port science/afni

AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing
3 dimensional images, especially functional MRI images used in
brain mapping research.

WWW: http://afni.nimh.nih.gov/

PR:             ports/90752
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
Reviewed by:    garga (mentor)
Approved by:    garga (mentor)

Number of commits found: 85

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