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Port details
afni Advanced Functional Neuro Imaging
2015.11.13_5 science on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: bacon4000@gmail.com search for ports maintained by this maintainer
Port Added: 25 Jan 2006 17:37:44
Also Listed In: biology graphics
License: GPLv2
This is a port of AFNI, Analysis of Functional Neuro Imaging.  AFNI is
a tool for analyzing 3 dimensional images, especially functional MRI
images used in brain mapping research.

WWW: http://afni.nimh.nih.gov/afni/
SVNWeb : Homepage : PortsMon
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (1651 items)
  1. /usr/local/share/licenses/afni-2015.11.13_5/catalog.mk
  2. /usr/local/share/licenses/afni-2015.11.13_5/LICENSE
  3. /usr/local/share/licenses/afni-2015.11.13_5/GPLv2
  4. bin/1dAstrip
  5. bin/1dBandpass
  6. bin/1dBport
  7. bin/1dCorrelate
  8. bin/1dDW_Grad_o_Mat
  9. bin/1dFlagMotion
  10. bin/1dGC.R
  11. bin/1dMarry
  12. bin/1dRplot
  13. bin/1dRplot.R
  14. bin/1dSEM
  15. bin/1dSEMr.R
  16. bin/1dSVAR.R
  17. bin/1dTsort
  18. bin/1dUpsample
  19. bin/1d_tool.py
  20. bin/1dcat
  21. bin/1ddot
  22. bin/1deval
  23. bin/1dfft
  24. bin/1dgenARMA11
  25. bin/1dgrayplot
  26. bin/1dmatcalc
  27. bin/1dnorm
  28. bin/1dplot
  29. bin/1dsum
  30. bin/1dsvd
  31. bin/1dtranspose
  32. bin/24swap
  33. bin/2dImReg
  34. bin/2perm
  35. bin/2swap
  36. bin/3dABoverlap
  37. bin/3dAFNIto3D
  38. bin/3dAFNItoANALYZE
  39. bin/3dAFNItoMINC
  40. bin/3dAFNItoNIFTI
  41. bin/3dAFNItoNIML
  42. bin/3dAFNItoRaw
  43. bin/3dANALYZEtoAFNI
  44. bin/3dANOVA
  45. bin/3dANOVA2
  46. bin/3dANOVA3
  47. bin/3dAOV.R
  48. bin/3dAcost
  49. bin/3dAllineate
  50. bin/3dAnatNudge
  51. bin/3dAnhist
  52. bin/3dAttribute
  53. bin/3dAutoTcorrelate
  54. bin/3dAutobox
  55. bin/3dAutomask
  56. bin/3dBRAIN_VOYAGERtoAFNI
  57. bin/3dBandpass
  58. bin/3dBlurInMask
  59. bin/3dBlurToFWHM
  60. bin/3dBrickStat
  61. bin/3dCM
  62. bin/3dCRUISEtoAFNI
  63. bin/3dClipLevel
  64. bin/3dClustBust
  65. bin/3dClustCount
  66. bin/3dClustSim
  67. bin/3dConformist
  68. bin/3dConvolve
  69. bin/3dCountSpikes
  70. bin/3dDFT
  71. bin/3dDTeig
  72. bin/3dDTtoDWI
  73. bin/3dDTtoNoisyDWI
  74. bin/3dDWItoDT
  75. bin/3dDWUncert
  76. bin/3dDeconvolve
  77. bin/3dDeconvolve_f
  78. bin/3dDespike
  79. bin/3dDetrend
  80. bin/3dEigsToDT
  81. bin/3dEmpty
  82. bin/3dEntropy
  83. bin/3dErrtsCormat
  84. bin/3dExtrema
  85. bin/3dFDR
  86. bin/3dFFT
  87. bin/3dFWHM
  88. bin/3dFWHMx
  89. bin/3dFourier
  90. bin/3dFriedman
  91. bin/3dGC.R
  92. bin/3dGenFeatureDist
  93. bin/3dGenPriors
  94. bin/3dGetrow
  95. bin/3dGroupInCorr
  96. bin/3dHist
  97. bin/3dICA.R
  98. bin/3dICC.R
  99. bin/3dICC_REML.R
  100. bin/3dIntracranial
  101. bin/3dInvFMRI
  102. bin/3dKS.R
  103. bin/3dKruskalWallis
  104. bin/3dLME
  105. bin/3dLME.R
  106. bin/3dLRflip
  107. bin/3dLSS
  108. bin/3dLocalBistat
  109. bin/3dLocalHistog
  110. bin/3dLocalPV
  111. bin/3dLocalSVD
  112. bin/3dLocalstat
  113. bin/3dMEMA
  114. bin/3dMEMA.R
  115. bin/3dMINCtoAFNI
  116. bin/3dMVM
  117. bin/3dMVM.R
  118. bin/3dMannWhitney
  119. bin/3dMaskToASCII
  120. bin/3dMatch
  121. bin/3dMax
  122. bin/3dMean
  123. bin/3dMedianFilter
  124. bin/3dNLfim
  125. bin/3dNetCorr
  126. bin/3dNormalityTest
  127. bin/3dNotes
  128. bin/3dNwarpAdjust
  129. bin/3dNwarpApply
  130. bin/3dNwarpCalc
  131. bin/3dNwarpCat
  132. bin/3dNwarpFuncs
  133. bin/3dNwarpXYZ
  134. bin/3dOverlap
  135. bin/3dPAR2AFNI.pl
  136. bin/3dPFM
  137. bin/3dPFM.R
  138. bin/3dPeriodogram
  139. bin/3dPolyfit
  140. bin/3dProbTrackID
  141. bin/3dPval
  142. bin/3dQwarp
  143. bin/3dREMLfit
  144. bin/3dROIMaker
  145. bin/3dROIstats
  146. bin/3dRSFC
  147. bin/3dRank
  148. bin/3dRankizer
  149. bin/3dReHo
  150. bin/3dRegAna
  151. bin/3dRetinoPhase
  152. bin/3dRowFillin
  153. bin/3dRprogDemo
  154. bin/3dRprogDemo.R
  155. bin/3dSeg
  156. bin/3dSetupGroupInCorr
  157. bin/3dSignatures
  158. bin/3dSignatures.R
  159. bin/3dSkullStrip
  160. bin/3dSpatNorm
  161. bin/3dStatClust
  162. bin/3dSurf2Vol
  163. bin/3dSurfMask
  164. bin/3dSynthesize
  165. bin/3dTORTOISEtoHere
  166. bin/3dTRfix
  167. bin/3dTSgen
  168. bin/3dTagalign
  169. bin/3dTcat
  170. bin/3dTcorr1D
  171. bin/3dTcorrMap
  172. bin/3dTcorrelate
  173. bin/3dTfitter
  174. bin/3dThreetoRGB
  175. bin/3dTnorm
  176. bin/3dToutcount
  177. bin/3dToyProg
  178. bin/3dTproject
  179. bin/3dTqual
  180. bin/3dTrackID
  181. bin/3dTshift
  182. bin/3dTsmooth
  183. bin/3dTsort
  184. bin/3dTstat
  185. bin/3dTwotoComplex
  186. bin/3dUndump
  187. bin/3dUnifize
  188. bin/3dUniformize
  189. bin/3dUpsample
  190. bin/3dVol2Surf
  191. bin/3dWarp
  192. bin/3dWarpDrive
  193. bin/3dWavelets
  194. bin/3dWilcoxon
  195. bin/3dWinsor
  196. bin/3dXYZcat
  197. bin/3dZcat
  198. bin/3dZcutup
  199. bin/3dZeropad
  200. bin/3dZregrid
  201. bin/3danisosmooth
  202. bin/3daxialize
  203. bin/3dbuc2fim
  204. bin/3dbucket
  205. bin/3dcalc
  206. bin/3dclust
  207. bin/3dcopy
  208. bin/3ddelay
  209. bin/3ddot
  210. bin/3ddup
  211. bin/3dedge3
  212. bin/3dfim
  213. bin/3dfim+
  214. bin/3dfractionize
  215. bin/3dhistog
  216. bin/3dinfill
  217. bin/3dinfo
  218. bin/3dkmeans
  219. bin/3dmaskSVD
  220. bin/3dmask_tool
  221. bin/3dmaskave
  222. bin/3dmaskdump
  223. bin/3dmatcalc
  224. bin/3dmatmult
  225. bin/3dmaxima
  226. bin/3dmerge
  227. bin/3dnewid
  228. bin/3dnoise
  229. bin/3dnvals
  230. bin/3dpc
  231. bin/3dproject
  232. bin/3drefit
  233. bin/3drename
  234. bin/3dresample
  235. bin/3dretroicor
  236. bin/3drotate
  237. bin/3dsvm
  238. bin/3dttest
  239. bin/3dttest++
  240. bin/3dvolreg
  241. bin/4swap
  242. bin/@1dDiffMag
  243. bin/@2dwarper
  244. bin/@2dwarper.Allin
  245. bin/@4Daverage
  246. bin/@ANATICOR
  247. bin/@AddEdge
  248. bin/@AfniEnv
  249. bin/@AfniOrient2RAImap
  250. bin/@AfniOrientSign
  251. bin/@Align_Centers
  252. bin/@Atlasize
  253. bin/@Center_Distance
  254. bin/@CheckForAfniDset
  255. bin/@CommandGlobb
  256. bin/@DO.examples
  257. bin/@DTI_studio_reposition
  258. bin/@DeblankFileNames
  259. bin/@DiceMetric
  260. bin/@DoPerRoi.py
  261. bin/@DriveAfni
  262. bin/@DriveSuma
  263. bin/@ElectroGrid
  264. bin/@ExamineGenFeatDists
  265. bin/@FS_roi_label
  266. bin/@FSlabel2dset
  267. bin/@FindAfniDsetPath
  268. bin/@FromRAI
  269. bin/@FullPath
  270. bin/@GetAfniBin
  271. bin/@GetAfniDims
  272. bin/@GetAfniID
  273. bin/@GetAfniOrient
  274. bin/@GetAfniPrefix
  275. bin/@GetAfniRes
  276. bin/@GetAfniView
  277. bin/@Install_3dPFM_Demo
  278. bin/@Install_AfniRetinoDemo
  279. bin/@Install_ClustScat_Demo
  280. bin/@Install_DBSproc
  281. bin/@Install_FATCAT_DEMO
  282. bin/@Install_FATMVM_DEMO
  283. bin/@Install_InstaCorr_Demo
  284. bin/@Install_MEICA_Demo
  285. bin/@Install_RSFMRI_Motion_Group_Demo
  286. bin/@Install_TSrestMovieDemo
  287. bin/@IsoMasks
  288. bin/@MakeLabelTable
  289. bin/@NoExt
  290. bin/@NoPound
  291. bin/@NoisySkullStrip
  292. bin/@Purify_1D
  293. bin/@Quiet_Talkers
  294. bin/@ROI_Corr_Mat
  295. bin/@R_funclist
  296. bin/@RenamePanga
  297. bin/@Reorder
  298. bin/@RetinoProc
  299. bin/@SUMA_AlignToExperiment
  300. bin/@SUMA_FSvolToBRIK
  301. bin/@SUMA_Make_Spec_Caret
  302. bin/@SUMA_Make_Spec_FS
  303. bin/@SUMA_Make_Spec_SF
  304. bin/@ScaleVolume
  305. bin/@ScriptCheck
  306. bin/@Shift_Volume
  307. bin/@ShowDynamicRange
  308. bin/@Spharm.examples
  309. bin/@SurfSmooth.HEAT_07.examples
  310. bin/@T1scale
  311. bin/@TimeDiff
  312. bin/@ToRAI
  313. bin/@UpdateAfni
  314. bin/@VolCenter
  315. bin/@afni.run.me
  316. bin/@align_partial_oblique
  317. bin/@auto_align
  318. bin/@auto_tlrc
  319. bin/@build_afni_Xlib
  320. bin/@clean_help_dir
  321. bin/@clip_volume
  322. bin/@compute_gcor
  323. bin/@demo_prompt
  324. bin/@diff.files
  325. bin/@diff.tree
  326. bin/@escape-
  327. bin/@fast_roi
  328. bin/@fix_FSsphere
  329. bin/@float_fix
  330. bin/@global_parse
  331. bin/@help.AFNI
  332. bin/@isOblique
  333. bin/@make_plug_diff
  334. bin/@make_stim_file
  335. bin/@move.to.series.dirs
  336. bin/@np
  337. bin/@parse_afni_name
  338. bin/@parse_name
  339. bin/@radial_correlate
  340. bin/@simulate_motion
  341. bin/@statauxcode
  342. bin/@toMNI_Awarp
  343. bin/@toMNI_Qwarpar
  344. bin/@update.afni.binaries
  345. bin/AFNI_Batch_R
  346. bin/AFNI_atlas_spaces.niml
  347. bin/AFNIio.R
  348. bin/AFNIplot.R
  349. bin/AlphaSim
  350. bin/AnalyzeTrace
  351. bin/BrainSkin
  352. bin/CompareSurfaces
  353. bin/ConvertDset
  354. bin/ConvertSurface
  355. bin/ConvexHull
  356. bin/CreateIcosahedron
  357. bin/DTIStudioFibertoSegments
  358. bin/Dimon
  359. bin/Dimon1
  360. bin/DriveSuma
  361. bin/ExamineXmat
  362. bin/ExamineXmat.R
  363. bin/FD2
  364. bin/FIRdesign
  365. bin/FSread_annot
  366. bin/GLTsymtest
  367. bin/HalloSuma
  368. bin/Ifile
  369. bin/InstaTract
  370. bin/IsoSurface
  371. bin/Level2.R
  372. bin/MakeColorMap
  373. bin/MapIcosahedron
  374. bin/ParseName
  375. bin/ROI2dataset
  376. bin/ROIgrow
  377. bin/RSFgen
  378. bin/SUMA_glxdino
  379. bin/SUMA_paperplane
  380. bin/SUMA_pixmap2eps
  381. bin/SampBias
  382. bin/ScaleToMap
  383. bin/Signatures.R
  384. bin/SpharmDeco
  385. bin/SpharmReco
  386. bin/Surf2VolCoord
  387. bin/SurfClust
  388. bin/SurfDist
  389. bin/SurfDsetInfo
  390. bin/SurfExtrema
  391. bin/SurfFWHM
  392. bin/SurfInfo
  393. bin/SurfMeasures
  394. bin/SurfPatch
  395. bin/SurfQual
  396. bin/SurfRetinoMap
  397. bin/SurfSmooth
  398. bin/SurfToSurf
  399. bin/SurfaceMetrics
  400. bin/Vecwarp
  401. bin/Xphace
  402. bin/abut
  403. bin/adwarp
  404. bin/afni
  405. bin/afni_base.py
  406. bin/afni_history
  407. bin/afni_open
  408. bin/afni_proc.py
  409. bin/afni_restproc.py
  410. bin/afni_run_R
  411. bin/afni_skeleton.py
  412. bin/afni_system_check.py
  413. bin/afni_util.py
  414. bin/afni_vcheck
  415. bin/afni_xmat.py
  416. bin/aiv
  417. bin/align_epi_anat.py
  418. bin/apsearch
  419. bin/ask_me.py
  420. bin/auto_warp.py
  421. bin/byteorder
  422. bin/cat_matvec
  423. bin/ccalc
  424. bin/cifti_tool
  425. bin/column_cat
  426. bin/count
  427. bin/db_mod.py
  428. bin/demo.fixed.niml.do
  429. bin/demo.mobile.niml.do
  430. bin/dicom_hdr
  431. bin/dicom_hinfo
  432. bin/dicom_to_raw
  433. bin/eg_main_chrono.py
  434. bin/ent16
  435. bin/fat_lat_csv.py
  436. bin/fat_mat_sel.py
  437. bin/fat_mvm_gridconv.py
  438. bin/fat_mvm_prep.py
  439. bin/fat_mvm_review.py
  440. bin/fat_mvm_scripter.py
  441. bin/fat_roi_row.py
  442. bin/fdrval
  443. bin/fftest
  444. bin/file_tool
  445. bin/fim2
  446. bin/float_scan
  447. bin/from3d
  448. bin/ftosh
  449. bin/ge_header
  450. bin/gen_epi_review.py
  451. bin/gen_group_command.py
  452. bin/gen_ss_review_scripts.py
  453. bin/gen_ss_review_table.py
  454. bin/gifti_tool
  455. bin/gui_uber_align_test.py
  456. bin/gui_uber_skel.py
  457. bin/gui_uber_subj.py
  458. bin/gui_uber_ttest.py
  459. bin/gui_xmat.py
  460. bin/help_format
  461. bin/im2niml
  462. bin/images_equal
  463. bin/imand
  464. bin/imaver
  465. bin/imcalc
  466. bin/imcat
  467. bin/imcutup
  468. bin/imdump
  469. bin/immask
  470. bin/imreg
  471. bin/imrotate
  472. bin/imstack
  473. bin/imstat
  474. bin/imupsam
  475. bin/inspec
  476. bin/lib_RR_plot.py
  477. bin/lib_afni1D.py
  478. bin/lib_fat_Rfactor.py
  479. bin/lib_fat_funcs.py
  480. bin/lib_fat_plot_sel.py
  481. bin/lib_matplot.py
  482. bin/lib_qt_gui.py
  483. bin/lib_realtime.py
  484. bin/lib_subjects.py
  485. bin/lib_surf_clustsim.py
  486. bin/lib_system_check.py
  487. bin/lib_textdata.py
  488. bin/lib_timing.py
  489. bin/lib_uber_align.py
  490. bin/lib_uber_skel.py
  491. bin/lib_uber_subject.py
  492. bin/lib_uber_ttest.py
  493. bin/lib_vars_object.py
  494. bin/lib_wx.py
  495. bin/lpc_align.py
  496. bin/make_pq_script.py
  497. bin/make_random_timing.py
  498. bin/make_stim_times.py
  499. bin/map_TrackID
  500. bin/mayo_analyze
  501. bin/meica.py
  502. bin/module_test_lib.py
  503. bin/mritopgm
  504. bin/mycat
  505. bin/myget
  506. bin/neuro_deconvolve.py
  507. bin/nicat
  508. bin/niccc
  509. bin/nifti1_test
  510. bin/nifti1_tool
  511. bin/nifti_tool
  512. bin/niml_feedme
  513. bin/niprobe
  514. bin/nsize
  515. bin/option_list.py
  516. bin/plugout_drive
  517. bin/plugout_ijk
  518. bin/plugout_tt
  519. bin/plugout_tta
  520. bin/prompt_user
  521. bin/python_module_test.py
  522. bin/quick.alpha.vals.py
  523. bin/quickspec
  524. bin/quotize
  525. bin/rPkgsInstall
  526. bin/rPkgsInstall.R
  527. bin/read_matlab_files.py
  528. bin/realtime_receiver.py
  529. bin/rmz
  530. bin/rotcom
  531. bin/rtfeedme
  532. bin/serial_helper
  533. bin/sfim
  534. bin/siemens_vision
  535. bin/slow_surf_clustsim.py
  536. bin/smooth.R
  537. bin/sqwave
  538. bin/strblast
  539. bin/suma
  540. bin/suma_change_spec
  541. bin/tfim
  542. bin/timing_tool.py
  543. bin/to3d
  544. bin/uber_align_test.py
  545. bin/uber_proc.py
  546. bin/uber_skel.py
  547. bin/uber_subject.py
  548. bin/uber_ttest.py
  549. bin/ui_xmat.py
  550. bin/uniq_images
  551. bin/waver
  552. bin/whereami
  553. bin/whirlgif
  554. bin/xmat_tool.py
  555. etc/mri/afni.cshrc
  556. etc/mri/afni.profile
  557. include/afni/3ddata.h
  558. include/afni/AFNI_label.h
  559. include/afni/Amalloc.h
  560. include/afni/Aomp.h
  561. include/afni/afni_environ.h
  562. include/afni/afni_suma.h
  563. include/afni/afni_warp.h
  564. include/afni/coxplot.h
  565. include/afni/cs.h
  566. include/afni/cs_qsort_small.h
  567. include/afni/cs_sort_template.h
  568. include/afni/debugtrace.h
  569. include/afni/editvol.h
  570. include/afni/eispack.h
  571. include/afni/f2c.h
  572. include/afni/killer.h
  573. include/afni/list_struct.h
  574. include/afni/machdep.h
  575. include/afni/mcw_glob.h
  576. include/afni/mcw_malloc.h
  577. include/afni/misc_math.h
  578. include/afni/mri_dicom_stuff.h
  579. include/afni/mri_warpfield.h
  580. include/afni/mrilib.h
  581. include/afni/multivector.h
  582. include/afni/nifti1.h
  583. include/afni/nifti1_io.h
  584. include/afni/nifticdf.h
  585. include/afni/niml.h
  586. include/afni/r_idisp.h
  587. include/afni/r_misc.h
  588. include/afni/r_new_resam_dset.h
  589. include/afni/rcmat.h
  590. include/afni/tagset.h
  591. include/afni/thd_atlas.h
  592. include/afni/thd_compress.h
  593. include/afni/thd_iochan.h
  594. include/afni/thd_maker.h
  595. include/afni/thd_ttatlas_CA_EZ.h
  596. include/afni/thd_ttatlas_query.h
  597. include/afni/vecmat.h
  598. include/afni/vol2surf.h
  599. include/afni/volpack.h
  600. include/afni/znzlib.h
  601. lib/afni/R_io.so
  602. lib/afni/libGLws.a
  603. lib/afni/libSUMA.a
  604. lib/afni/libcoxplot.a
  605. lib/afni/libmri.a
  606. lib/afni/libmrix.a
  607. lib/afni/libvolpack.a
  608. lib/afni/model_beta.so
  609. lib/afni/model_constant.so
  610. lib/afni/model_conv_PRF.so
  611. lib/afni/model_conv_PRF_6.so
  612. lib/afni/model_conv_cosine4.so
  613. lib/afni/model_conv_diffgamma.so
  614. lib/afni/model_convgamma.so
  615. lib/afni/model_convgamma2a.so
  616. lib/afni/model_demri_3.so
  617. lib/afni/model_diffexp.so
  618. lib/afni/model_diffusion.so
  619. lib/afni/model_exp.so
  620. lib/afni/model_expMEMRI.so
  621. lib/afni/model_expMEMRI3.so
  622. lib/afni/model_expr2.so
  623. lib/afni/model_gammavar.so
  624. lib/afni/model_linear.so
  625. lib/afni/model_linplusort.so
  626. lib/afni/model_michaelis_menton.so
  627. lib/afni/model_null.so
  628. lib/afni/model_quadratic.so
  629. lib/afni/model_sinewave_ap.so
  630. lib/afni/model_sinewave_apf.so
  631. lib/afni/model_squarewave_ap.so
  632. lib/afni/model_squarewave_apf.so
  633. lib/afni/model_trnglwave_ap.so
  634. lib/afni/model_trnglwave_apf.so
  635. lib/afni/model_zero.so
  636. lib/afni/plug_3Ddump_V2.so
  637. lib/afni/plug_3ddot.so
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  1351. share/afni/funstuff/face_rickr_dive.jpg
  1352. share/afni/funstuff/face_rickr_forbid.jpg
  1353. share/afni/funstuff/face_rjsquirrel.jpg
  1354. share/afni/funstuff/face_rmbirn.jpg
  1355. share/afni/funstuff/face_robinkampe.jpg
  1356. share/afni/funstuff/face_robterwill.jpg
  1357. share/afni/funstuff/face_rory.jpg
  1358. share/afni/funstuff/face_roryd.jpg
  1359. share/afni/funstuff/face_rprost.jpg
  1360. share/afni/funstuff/face_rrey2.jpg
  1361. share/afni/funstuff/face_rreynolds.jpg
  1362. share/afni/funstuff/face_rsaad.jpg
  1363. share/afni/funstuff/face_rugmonster.jpg
  1364. share/afni/funstuff/face_rwcox.jpg
  1365. share/afni/funstuff/face_rwcox2.jpg
  1366. share/afni/funstuff/face_rwcox3.jpg
  1367. share/afni/funstuff/face_rwcox4.jpg
  1368. share/afni/funstuff/face_rwcox5.jpg
  1369. share/afni/funstuff/face_rwcox6.jpg
  1370. share/afni/funstuff/face_rwcox7.jpg
  1371. share/afni/funstuff/face_rwcox8.jpg
  1372. share/afni/funstuff/face_rwcox9.jpg
  1373. share/afni/funstuff/face_rwcoxA.jpg
  1374. share/afni/funstuff/face_rwcoxB.jpg
  1375. share/afni/funstuff/face_rwcoxC.jpg
  1376. share/afni/funstuff/face_rwcoxD.jpg
  1377. share/afni/funstuff/face_rwcoxE.jpg
  1378. share/afni/funstuff/face_rwcoxF.jpg
  1379. share/afni/funstuff/face_rwcoxG.jpg
  1380. share/afni/funstuff/face_rwcoxH.jpg
  1381. share/afni/funstuff/face_rwcoxI.jpg
  1382. share/afni/funstuff/face_rwcoxJ.jpg
  1383. share/afni/funstuff/face_rwcox_di_milano.jpg
  1384. share/afni/funstuff/face_s_torrisi.jpg
  1385. share/afni/funstuff/face_saccanch.jpg
  1386. share/afni/funstuff/face_sara_inati.jpg
  1387. share/afni/funstuff/face_sean2.jpg
  1388. share/afni/funstuff/face_shayna3.jpg
  1389. share/afni/funstuff/face_shyaustrian.jpg
  1390. share/afni/funstuff/face_silvina_horovitz.1.jpg
  1391. share/afni/funstuff/face_silvina_horovitz.jpg
  1392. share/afni/funstuff/face_sjapee.jpg
  1393. share/afni/funstuff/face_skammy.jpg
  1394. share/afni/funstuff/face_skapdoskar.jpg
  1395. share/afni/funstuff/face_sknoonan.jpg
  1396. share/afni/funstuff/face_smackey.jpg
  1397. share/afni/funstuff/face_smarrett.jpg
  1398. share/afni/funstuff/face_smlaconte.jpg
  1399. share/afni/funstuff/face_snakeblood.jpg
  1400. share/afni/funstuff/face_snakesoju.jpg
  1401. share/afni/funstuff/face_soo-eun_chang.jpg
  1402. share/afni/funstuff/face_soo-eun_chang_bb.jpg
  1403. share/afni/funstuff/face_sook-lei_liew.1.jpg
  1404. share/afni/funstuff/face_sook-lei_liew.jpg
  1405. share/afni/funstuff/face_soren_lowell.jpg
  1406. share/afni/funstuff/face_souheil_inati.jpg
  1407. share/afni/funstuff/face_ssaad.jpg
  1408. share/afni/funstuff/face_ssmall.jpg
  1409. share/afni/funstuff/face_steverao.jpg
  1410. share/afni/funstuff/face_stu_white.jpg
  1411. share/afni/funstuff/face_sudre_gustavo.jpg
  1412. share/afni/funstuff/face_sule_tinaz.jpg
  1413. share/afni/funstuff/face_sumabucks.jpg
  1414. share/afni/funstuff/face_tainan.jpg
  1415. share/afni/funstuff/face_tammy_tran.jpg
  1416. share/afni/funstuff/face_tang.jpg
  1417. share/afni/funstuff/face_teddeyoe.jpg
  1418. share/afni/funstuff/face_tieshan.jpg
  1419. share/afni/funstuff/face_tim_meeker.jpg
  1420. share/afni/funstuff/face_tolkien.jpg
  1421. share/afni/funstuff/face_tomholroyd.jpg
  1422. share/afni/funstuff/face_tross.jpg
  1423. share/afni/funstuff/face_unknown1.jpg
  1424. share/afni/funstuff/face_vader.jpg
  1425. share/afni/funstuff/face_vdcosta.jpg
  1426. share/afni/funstuff/face_veronica.jpg
  1427. share/afni/funstuff/face_vhradil.jpg
  1428. share/afni/funstuff/face_victoria_poole.1.jpg
  1429. share/afni/funstuff/face_victoria_poole.jpg
  1430. share/afni/funstuff/face_vincent1.jpg
  1431. share/afni/funstuff/face_vincent2.jpg
  1432. share/afni/funstuff/face_vincent3.jpg
  1433. share/afni/funstuff/face_vincent4.jpg
  1434. share/afni/funstuff/face_vnapadow.jpg
  1435. share/afni/funstuff/face_wan-ling_tseng.jpg
  1436. share/afni/funstuff/face_wapostman1.jpg
  1437. share/afni/funstuff/face_wapostman2.jpg
  1438. share/afni/funstuff/face_watercubestud.jpg
  1439. share/afni/funstuff/face_wendyhasenkamp.jpg
  1440. share/afni/funstuff/face_wmluh.jpg
  1441. share/afni/funstuff/face_wpostman.jpg
  1442. share/afni/funstuff/face_xinianzuo.jpg
  1443. share/afni/funstuff/face_xue_zhang.jpg
  1444. share/afni/funstuff/face_xzhang.jpg
  1445. share/afni/funstuff/face_yaqiong_xiao.jpg
  1446. share/afni/funstuff/face_yarik_halchenko.jpg
  1447. share/afni/funstuff/face_yingyingwang.jpg
  1448. share/afni/funstuff/face_zman.jpg
  1449. share/afni/funstuff/face_zsaad.jpg
  1450. share/afni/funstuff/face_zsaad2.jpg
  1451. share/afni/funstuff/face_zsaad3.jpg
  1452. share/afni/funstuff/face_zsaad4.jpg
  1453. share/afni/funstuff/face_zsaad5.jpg
  1454. share/afni/funstuff/face_zsaad6.jpg
  1455. share/afni/funstuff/face_zsaad7.jpg
  1456. share/afni/funstuff/face_zsaad8.jpg
  1457. share/afni/funstuff/face_zzzdini.jpg
  1458. share/afni/funstuff/face_zzzsunbrain.jpg
  1459. share/afni/funstuff/poem_bj1.txt
  1460. share/afni/funstuff/poem_eapoe1.txt
  1461. share/afni/funstuff/poem_em.txt
  1462. share/afni/funstuff/poem_ghm3.txt
  1463. share/afni/funstuff/poem_gmh1.txt
  1464. share/afni/funstuff/poem_gmh2.txt
  1465. share/afni/funstuff/poem_gmh3.txt
  1466. share/afni/funstuff/poem_jm1.txt
  1467. share/afni/funstuff/poem_pbs1.txt
  1468. share/afni/funstuff/poem_pbs2.txt
  1469. share/afni/funstuff/poem_rf1.txt
  1470. share/afni/funstuff/poem_rk1.txt
  1471. share/afni/funstuff/poem_rls1.txt
  1472. share/afni/funstuff/poem_ww1.txt
  1473. share/afni/funstuff/poem_ww2.txt
  1474. share/afni/funstuff/splash_12Apostles.jpg
  1475. share/afni/funstuff/splash_3monkeys.jpg
  1476. share/afni/funstuff/splash_NMcloud.jpg
  1477. share/afni/funstuff/splash_afnicake20.jpg
  1478. share/afni/funstuff/splash_afniegypt.jpg
  1479. share/afni/funstuff/splash_afnigoogle.jpg
  1480. share/afni/funstuff/splash_afnirocks.jpg
  1481. share/afni/funstuff/splash_afnistuff.jpg
  1482. share/afni/funstuff/splash_afnisuma.jpg
  1483. share/afni/funstuff/splash_afnitree.jpg
  1484. share/afni/funstuff/splash_airplane.jpg
  1485. share/afni/funstuff/splash_allfaces.jpg
  1486. share/afni/funstuff/splash_angkorwat.jpg
  1487. share/afni/funstuff/splash_arno.jpg
  1488. share/afni/funstuff/splash_aruba.jpg
  1489. share/afni/funstuff/splash_asosan.jpg
  1490. share/afni/funstuff/splash_babytaj.jpg
  1491. share/afni/funstuff/splash_backyard1.jpg
  1492. share/afni/funstuff/splash_barcelona.jpg
  1493. share/afni/funstuff/splash_bawiti.jpg
  1494. share/afni/funstuff/splash_beijingnormal.jpg
  1495. share/afni/funstuff/splash_betshean.jpg
  1496. share/afni/funstuff/splash_birds.jpg
  1497. share/afni/funstuff/splash_blackdesert.jpg
  1498. share/afni/funstuff/splash_blackdesert2.jpg
  1499. share/afni/funstuff/splash_bluemosque.jpg
  1500. share/afni/funstuff/splash_bobeyes.jpg
  1501. share/afni/funstuff/splash_bobkarl.jpg
  1502. share/afni/funstuff/splash_bonampak.jpg
  1503. share/afni/funstuff/splash_bootcampA.jpg
  1504. share/afni/funstuff/splash_bootcampB.jpg
  1505. share/afni/funstuff/splash_bootcamp_dec2013.jpg
  1506. share/afni/funstuff/splash_brains25c.jpg
  1507. share/afni/funstuff/splash_brycecanyon.jpg
  1508. share/afni/funstuff/splash_buckskin.jpg
  1509. share/afni/funstuff/splash_camel.jpg
  1510. share/afni/funstuff/splash_capetown.jpg
  1511. share/afni/funstuff/splash_capitol.jpg
  1512. share/afni/funstuff/splash_cavalieri.jpg
  1513. share/afni/funstuff/splash_chichen.jpg
  1514. share/afni/funstuff/splash_chipmunk.jpg
  1515. share/afni/funstuff/splash_chongqing.jpg
  1516. share/afni/funstuff/splash_clearcreek.jpg
  1517. share/afni/funstuff/splash_coloradograss.jpg
  1518. share/afni/funstuff/splash_coloradohike.jpg
  1519. share/afni/funstuff/splash_colossi.jpg
  1520. share/afni/funstuff/splash_cupcakes.jpg
  1521. share/afni/funstuff/splash_dartmouth.jpg
  1522. share/afni/funstuff/splash_dartmouth2014.jpg
  1523. share/afni/funstuff/splash_deadsea.jpg
  1524. share/afni/funstuff/splash_deertrap.jpg
  1525. share/afni/funstuff/splash_discovery.jpg
  1526. share/afni/funstuff/splash_domerock.jpg
  1527. share/afni/funstuff/splash_earth.jpg
  1528. share/afni/funstuff/splash_earthtopo.jpg
  1529. share/afni/funstuff/splash_elephant.jpg
  1530. share/afni/funstuff/splash_emars.jpg
  1531. share/afni/funstuff/splash_emperorzhark.jpg
  1532. share/afni/funstuff/splash_evilafni.jpg
  1533. share/afni/funstuff/splash_giza.jpg
  1534. share/afni/funstuff/splash_gokyo2015.jpg
  1535. share/afni/funstuff/splash_gwalior.jpg
  1536. share/afni/funstuff/splash_hagiasophia.jpg
  1537. share/afni/funstuff/splash_hanyang.jpg
  1538. share/afni/funstuff/splash_harleyjeff.jpg
  1539. share/afni/funstuff/splash_haskins.jpg
  1540. share/afni/funstuff/splash_hbm2013.jpg
  1541. share/afni/funstuff/splash_hikeofdoom.jpg
  1542. share/afni/funstuff/splash_horus.jpg
  1543. share/afni/funstuff/splash_houston.jpg
  1544. share/afni/funstuff/splash_imcheon.jpg
  1545. share/afni/funstuff/splash_jerzytulsa.jpg
  1546. share/afni/funstuff/splash_joesun.jpg
  1547. share/afni/funstuff/splash_kalachakra.jpg
  1548. share/afni/funstuff/splash_karski.jpg
  1549. share/afni/funstuff/splash_kebb.jpg
  1550. share/afni/funstuff/splash_lightsaber.jpg
  1551. share/afni/funstuff/splash_littlepetra.jpg
  1552. share/afni/funstuff/splash_lunchtime.jpg
  1553. share/afni/funstuff/splash_machu.jpg
  1554. share/afni/funstuff/splash_malbork.jpg
  1555. share/afni/funstuff/splash_marsalbor.jpg
  1556. share/afni/funstuff/splash_mathlab.jpg
  1557. share/afni/funstuff/splash_mayanmexico.jpg
  1558. share/afni/funstuff/splash_mcw03.jpg
  1559. share/afni/funstuff/splash_melbourne.jpg
  1560. share/afni/funstuff/splash_merrycoxpainting.jpg
  1561. share/afni/funstuff/splash_monastery.jpg
  1562. share/afni/funstuff/splash_monks.jpg
  1563. share/afni/funstuff/splash_monumentvalley.jpg
  1564. share/afni/funstuff/splash_mteverest.jpg
  1565. share/afni/funstuff/splash_mtyale.jpg
  1566. share/afni/funstuff/splash_ncku.jpg
  1567. share/afni/funstuff/splash_nepalbridge.jpg
  1568. share/afni/funstuff/splash_nepalmani.jpg
  1569. share/afni/funstuff/splash_nepalphortse.jpg
  1570. share/afni/funstuff/splash_nihfall2014.jpg
  1571. share/afni/funstuff/splash_palenque.jpg
  1572. share/afni/funstuff/splash_palk.jpg
  1573. share/afni/funstuff/splash_pba5.jpg
  1574. share/afni/funstuff/splash_petra.jpg
  1575. share/afni/funstuff/splash_petratreasury.jpg
  1576. share/afni/funstuff/splash_pinkrock.jpg
  1577. share/afni/funstuff/splash_pisa.jpg
  1578. share/afni/funstuff/splash_pisa2010.jpg
  1579. share/afni/funstuff/splash_pot.jpg
  1580. share/afni/funstuff/splash_potomac.jpg
  1581. share/afni/funstuff/splash_prayerflags.jpg
  1582. share/afni/funstuff/splash_qufu.jpg
  1583. share/afni/funstuff/splash_rasnov.jpg
  1584. share/afni/funstuff/splash_redtree.jpg
  1585. share/afni/funstuff/splash_rhinos.jpg
  1586. share/afni/funstuff/splash_romaniachurch.jpg
  1587. share/afni/funstuff/splash_sandiego.jpg
  1588. share/afni/funstuff/splash_sdyb.jpg
  1589. share/afni/funstuff/splash_seoul.jpg
  1590. share/afni/funstuff/splash_seoul2011.jpg
  1591. share/afni/funstuff/splash_shadowbob.jpg
  1592. share/afni/funstuff/splash_sixpoles.jpg
  1593. share/afni/funstuff/splash_soren.jpg
  1594. share/afni/funstuff/splash_squidding.jpg
  1595. share/afni/funstuff/splash_sscc03.jpg
  1596. share/afni/funstuff/splash_sscc2006.jpg
  1597. share/afni/funstuff/splash_sscc2009.jpg
  1598. share/afni/funstuff/splash_sunriseganges.jpg
  1599. share/afni/funstuff/splash_sunset.jpg
  1600. share/afni/funstuff/splash_tajmahal.jpg
  1601. share/afni/funstuff/splash_tajmahalB.jpg
  1602. share/afni/funstuff/splash_tangtomb.jpg
  1603. share/afni/funstuff/splash_thaitemple.jpg
  1604. share/afni/funstuff/splash_themaze.jpg
  1605. share/afni/funstuff/splash_thewave.jpg
  1606. share/afni/funstuff/splash_thewave2.jpg
  1607. share/afni/funstuff/splash_thewave3.jpg
  1608. share/afni/funstuff/splash_titicaca.jpg
  1609. share/afni/funstuff/splash_todaiji.jpg
  1610. share/afni/funstuff/splash_troll.jpg
  1611. share/afni/funstuff/splash_tuebingen.jpg
  1612. share/afni/funstuff/splash_tulsa2011.jpg
  1613. share/afni/funstuff/splash_twinkies.jpg
  1614. share/afni/funstuff/splash_umiami.jpg
  1615. share/afni/funstuff/splash_usajapan.jpg
  1616. share/afni/funstuff/splash_vincent.jpg
  1617. share/afni/funstuff/splash_wadirum.jpg
  1618. share/afni/funstuff/splash_wall.jpg
  1619. share/afni/funstuff/splash_watercube.jpg
  1620. share/afni/funstuff/splash_wedding2011.jpg
  1621. share/afni/funstuff/splash_westva1.jpg
  1622. share/afni/funstuff/splash_westva2.jpg
  1623. share/afni/funstuff/splash_whitedesert.jpg
  1624. share/afni/funstuff/splash_wutaishan.jpg
  1625. share/afni/funstuff/splash_wutaishanX.jpg
  1626. share/afni/funstuff/splash_xian.jpg
  1627. share/afni/funstuff/splash_yrkim.jpg
  1628. share/afni/funstuff/splash_zsaad1.jpg
  1629. share/doc/afni/README.3dsvm.realtime
  1630. share/doc/afni/README.Ifile
  1631. share/doc/afni/README.afnigui
  1632. share/doc/afni/README.atlas_building
  1633. share/doc/afni/README.attributes
  1634. share/doc/afni/README.bzip2
  1635. share/doc/afni/README.changes
  1636. share/doc/afni/README.compression
  1637. share/doc/afni/README.copyright
  1638. share/doc/afni/README.driver
  1639. share/doc/afni/README.environment
  1640. share/doc/afni/README.func_types
  1641. share/doc/afni/README.notes
  1642. share/doc/afni/README.permtest
  1643. share/doc/afni/README.plugouts
  1644. share/doc/afni/README.realtime
  1645. share/doc/afni/README.registration
  1646. share/doc/afni/README.render_scripts
  1647. share/doc/afni/README.roi
  1648. share/doc/afni/README.setup
  1649. share/doc/afni/README.volreg
  1650. share/doc/afni/README.web
  1651. share/doc/afni/README.ziad
  1652. Collapse this list.

To install the port: cd /usr/ports/science/afni/ && make install clean
To add the package: pkg install afni

PKGNAME: afni

distinfo:

SHA256 (afni-2015.11.13.tar.xz) = b8647ed2f522a520d90cbfd3da70d34849cec421678ff3baf0ecbb6e9e72414b
SIZE (afni-2015.11.13.tar.xz) = 48722840


NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. gm4 : devel/m4
  2. msgfmt : devel/gettext-tools
  3. gmake : devel/gmake
  4. python2.7 : lang/python27
  5. libGL.so : graphics/mesa-libs
  6. glproto.pc : x11/glproto
  7. dri2proto.pc : x11/dri2proto
  8. dri3proto.pc : x11/dri3proto
  9. glproto.pc : x11/glproto
  10. dri2proto.pc : x11/dri2proto
  11. dri3proto.pc : x11/dri3proto
  12. x11.pc : x11/libX11
  13. xext.pc : x11/libXext
  14. xi.pc : x11/libXi
  15. xmu.pc : x11-toolkits/libXmu
  16. xp.pc : x11/libXp
  17. xt.pc : x11-toolkits/libXt
  18. xpm.pc : x11/libXpm
  19. perl5>=5.24<5.25 : lang/perl5.24
Runtime dependencies:
  1. endian : sysutils/endian
  2. mpeg_encode : multimedia/mpeg_encode
  3. ppmtogif : graphics/netpbm
  4. qhull : math/qhull5
  5. cjpeg : graphics/jpeg-turbo
  6. python2.7 : lang/python27
  7. libGL.so : graphics/mesa-libs
  8. x11.pc : x11/libX11
  9. xext.pc : x11/libXext
  10. xi.pc : x11/libXi
  11. xmu.pc : x11-toolkits/libXmu
  12. xp.pc : x11/libXp
  13. xt.pc : x11-toolkits/libXt
  14. xpm.pc : x11/libXpm
  15. perl5>=5.24<5.25 : lang/perl5.24
Library dependencies:
  1. libexpat.so : textproc/expat2
  2. libf2c.so : lang/f2c
  3. libR.so : math/R
  4. libgsl.so : math/gsl
  5. libnetcdff.so : science/netcdf-fortran
  6. libxml2.so : textproc/libxml2
  7. libXm.so : x11-toolkits/open-motif
  8. libintl.so : devel/gettext-runtime
  9. libiconv.so : converters/libiconv
  10. libXm.so.4 : x11-toolkits/open-motif
  11. libglib-2.0.so : devel/glib20
  12. libintl.so : devel/gettext-runtime
  13. libGLU.so : graphics/libGLU
  14. libGLw.so : graphics/libGLw
There are no ports dependent upon this port

Configuration Options
     No options to configure

USES:
gettext gmake iconv jpeg:run motif perl5 python shebangfix tar:xz gnome

Master Sites:
  1. http://www.acadix.biz/Ports/distfiles/

Number of commits found: 61

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
24 Jul 2017 18:26:39
Original commit files touched by this commit  2015.11.13_5
Revision:446540
pawel search for other commits by this committer
After r446199 libR.so has SONAME and was made visible for
consumer ports. Register correct dependency by using LIB_DEPENDS
instead of BUILD|RUN_DEPENDS dance.

math/rkward-kde4:
- Add 2 missing files to pkg-plist also

PR:		219776
Submitted by:	myself
Approved by:	maintainers timeouts
03 Jul 2017 20:38:12
Original commit files touched by this commit  2015.11.13_5
Revision:444988
tcberner search for other commits by this committer
Update math/gsl to 2.4

Exp-Run by:	antoine
PR:		220408
23 May 2017 05:03:16
Original commit files touched by this commit  2015.11.13_4
Revision:441503
rezny search for other commits by this committer
Revision bump of all ports with USE_GL after consolidation of mesa-libs

Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D10845
04 May 2017 05:26:01
Original commit files touched by this commit  2015.11.13_3
Revision:440090
tcberner search for other commits by this committer
Fix shebangs

Reviewed by:		mat
Approved by:		mat (mentor)
Differential Revision:	https://reviews.freebsd.org/D10527
02 May 2017 05:26:40
Original commit files touched by this commit  2015.11.13_2
Revision:439928
tcberner search for other commits by this committer
Update math/gsl to 2.3

This release introduces some new features and fixes several bugs:
	http://savannah.gnu.org/forum/forum.php?forum_id=8751

* update to 2.3 and take maintainership
* update math/py-gsl to 2.2.0 for gsl2 support
* update math/rubygem-rb-gsl to 2.1.0.2 for gsl2 support

PR:		218952
Exp-run by:	antoine
Reviewed by:	mat, rakuco
Approved by:	rakuco (mentor)
Differential Revision:	https://reviews.freebsd.org/D10522
29 Nov 2016 21:15:41
Original commit files touched by this commit  2015.11.13_1
Revision:427397
jrm search for other commits by this committer
science/afni: Use BUILD_DEPENDS/RUN_DEPENDS instead of LIB_DEPENDS for
math/R, because R may be configured without libR.

While here, fix some stage-qa warnings about indirect dependencies.

Reviewed by:	AMDmi3
Approved by:	bacon4000@gmail.com (maintainer) swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D8649
19 May 2016 11:09:14
Original commit files touched by this commit  2015.11.13
Revision:415503
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-messages

Approved by:	portmgr blanket
19 May 2016 10:57:35
Original commit files touched by this commit  2015.11.13
Revision:415501
amdmi3 search for other commits by this committer
- Fix trailing whitespace in Makefiles

Approved by:	portmgr blanket
01 Apr 2016 14:25:18
Original commit files touched by this commit  2015.11.13
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
27 Feb 2016 22:03:30
Original commit files touched by this commit  2015.11.13
Revision:409693
rakuco search for other commits by this committer
Update to 2015.11.13.

Upgrade to a more recent snapshot, and stop requiring GCC.

PR:		206930
Submitted by:	Jason Bacon <bacon4000@gmail.com> (maintainer)
11 Dec 2015 08:48:57
Original commit files touched by this commit  2012.04.17.2129_12
Revision:403506
miwi search for other commits by this committer
- Update maintainer mail address
- Update/Remove MASTER_SITE

PR:		204755
Submitted by:	 jwbacon@tds.net (maintainer)
Approved by:	mat (mentor)
Differential Revision:	D4493
01 Oct 2015 21:34:36
Original commit files touched by this commit  2012.04.17.2129_12
Revision:398387
amdmi3 search for other commits by this committer
- Pet portlint
- Switch to options helpers

Approved by:	portmgr blanket
22 Jun 2015 18:33:22
Original commit files touched by this commit  2012.04.17.2129_12
Revision:390310
antoine search for other commits by this committer
Convert to USES=jpeg
24 Jan 2015 19:27:28
Original commit files touched by this commit  2012.04.17.2129_12
Revision:377815
antoine search for other commits by this committer
Fix some _DEPENDS
12 Nov 2014 18:48:53
Original commit files touched by this commit  2012.04.17.2129_12
Revision:372500
antoine search for other commits by this committer
Cleanup plist
10 Sep 2014 20:50:37
Original commit files touched by this commit  2012.04.17.2129_11
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
17 Aug 2014 13:09:56
Original commit files touched by this commit  2012.04.17.2129_10
Revision:365182
tijl search for other commits by this committer
math/gsl:
- Add USES=libtool and bump dependent ports
- Add USES=pathfix and INSTALL_TARGET=install-strip

Approved by:	portmgr (implicit, bump unstage port)
15 Aug 2014 21:08:21
Original commit files touched by this commit  2012.04.17.2129_9
Revision:365049
sunpoet search for other commits by this committer
- Update to 4.4.0
- Bump PORTREVISION for science/netcdf-fortran shlib change [1]

Changes:	https://github.com/Unidata/netcdf-fortran/blob/master/RELEASE_NOTES.md
Approved by:	portmgr (implicit, unstaged port) [1]
15 Jul 2014 16:51:35
Original commit files touched by this commit  2012.04.17.2129_8
Revision:361975
adamw search for other commits by this committer
Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.
25 Jun 2014 05:35:32
Original commit files touched by this commit  2012.04.17.2129_8
Revision:359185
bapt search for other commits by this committer
Convert GMAKE to MAKE_CMD
Please note that lots of invocation of MAKE_CMD here are wrong as they do not
properly respect MAKE_ENV and friends

With hat:	portmgr
17 Jun 2014 14:41:05
Original commit files touched by this commit  2012.04.17.2129_8
Revision:358125
rene search for other commits by this committer
science/afni: bring back into shape.

- Stage support
- Unexpire
- Add license (GPLv2)
- Use modern LIB_DEPENDS
- Explicitly mention dependencies
- Add CONFLICTS with im-*, nifticlib-* and open-usp-tukubai-*
- Use perl5 and GCC
- Tidy pkg-descr
- Clean up pkg-plist
- Bump PORTREVISION

While here:
- Use BROKEN_arch to avoid including bsd.port.pre.mk
- Use PORT_OPTIONS:MDOCS instead of NOPORTDOCS
- Remove obsolete post-install target

PR:		186988
Submitted by:	maintainer (jwbacon@tds.net)
13 May 2014 16:59:52
Original commit files touched by this commit  2012.04.17.2129_7
Revision:353973
antoine search for other commits by this committer
Deprecate ports BROKEN for more than 6 months

With hat:	portmgr
10 Mar 2014 20:55:22
Original commit files touched by this commit  2012.04.17.2129_7
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
13 Nov 2013 08:19:35
Original commit files touched by this commit  2012.04.17.2129_6
Revision:333659
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
26 Oct 2013 00:52:36
Original commit files touched by this commit  2012.04.17.2129_6
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  2012.04.17.2129_5
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
26 Aug 2013 16:06:38
Original commit files touched by this commit  2012.04.17.2129_5
Revision:325401
bf search for other commits by this committer
Update math/gsl to 1.16 and adjust some dependent ports
10 Jul 2013 07:00:44
Original commit files touched by this commit  2012.04.17.2129_4
Revision:322622  Sanity Test Failure
bapt search for other commits by this committer
Convert from USE_MOTIF to USES=motif
While here:
- Trim headers
- Convert USE_GMAKE to USES=gmake
- Remove indefinite article from comment
28 May 2013 15:15:06
Original commit files touched by this commit  2012.04.17.2129_4
Revision:319316
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
27 Apr 2013 18:25:25
Original commit files touched by this commit  2012.04.17.2129_3
Revision:316683
mva search for other commits by this committer
- Convert USE_ICONV=yes to USES=iconv
- Change USE_GNOME=pkgconfig|gnomehack to USES=pathfix|pkgconfig and
  USE_GETTEXT=yes to USES=gettext while here
07 Mar 2013 04:21:35
Original commit files touched by this commit  2012.04.17.2129_3
Revision:313562
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
04 Jan 2013 17:51:39
Original commit files touched by this commit  2012.04.17.2129_2
Revision:309935
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
24 Jun 2012 21:53:38
Original commit files touched by this commit  2012.04.17.2129_1
dougb search for other commits by this committer
s/X11BASE/LOCALBASE/, or equivalent.

The X11BASE variable is long gone, however these ports were not updated.
01 Jun 2012 05:26:28
Original commit files touched by this commit  2012.04.17.2129_1
dinoex search for other commits by this committer
- update png to 1.5.10
11 May 2012 17:05:09
Original commit files touched by this commit  2012.04.17.2129
pawel search for other commits by this committer
- Update to build 2012-04-17 [1]
- Projest has new homepage [1]
- Mark MAKE_JOBS_UNSAFE

PR:             ports/167651 [1]
Submitted by:   Jason Bacon <jwbacon@tds.net> (maintainer) [1]
24 Oct 2011 09:11:38
Original commit files touched by this commit  2008.01.02.1043_6
dougb search for other commits by this committer
The vast majority of pkg-descr files had the following format when they
had both lines:

Author: ...
WWW: ....

So standardize on that, and move them to the end of the file when necessary.

Also fix some more whitespace, and remove more "signature tags" of varying
forms, like -- name, etc.

s/AUTHOR/Author/

A few other various formatting issues
03 Jul 2011 13:22:25
Original commit files touched by this commit  2008.01.02.1043_6
ohauer search for other commits by this committer
 - remove MD5
02 May 2011 12:44:53
Original commit files touched by this commit  2008.01.02.1043_6
makc search for other commits by this committer
Bump PORTREVISION after open-mofit update
31 May 2010 02:01:56
Original commit files touched by this commit  2008.01.02.1043_5
ade search for other commits by this committer
Bounce PORTREVISION for gettext-related ports.  Have fun, ya'll.
28 Mar 2010 06:47:48
Original commit files touched by this commit  2008.01.02.1043_4
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
05 Feb 2010 11:46:55
Original commit files touched by this commit  2008.01.02.1043_3
dinoex search for other commits by this committer
- update to jpeg-8
19 Jun 2009 20:06:31
Original commit files touched by this commit  2008.01.02.1043_2
linimon search for other commits by this committer
Update maintainer's email address.  Had already been done for his
other ports.
24 Jan 2009 10:02:09
Original commit files touched by this commit  2008.01.02.1043_2
flz search for other commits by this committer
Fix science/afni after X.org 7.4 import (needs Xi).

Reported by:    pointyhat (via pav)
25 Jul 2008 12:24:09
Original commit files touched by this commit  2008.01.02.1043_1
pav search for other commits by this committer
- Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default
MAKE_ENV
06 Jun 2008 13:59:05
Original commit files touched by this commit  2008.01.02.1043_1
edwin search for other commits by this committer
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
19 Apr 2008 17:56:05
Original commit files touched by this commit  2008.01.02.1043
  Sanity Test Failure
miwi search for other commits by this committer
- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)
28 Jan 2008 16:42:02
Original commit files touched by this commit  2008.01.02.1043
tabthorpe search for other commits by this committer
- Update to 2008.01.02.1043

PR:             ports/119961
Submitted by:   Jason Bacon <bacon smithers.neuro.mcw.edu> (maintainer)
21 Jun 2007 12:33:48
Original commit files touched by this commit  2007.06.15.1339
miwi search for other commits by this committer
- Update to 2007.06.15.1339
- Unbreak

PR:             113887
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
10 Jun 2007 04:04:38
Original commit files touched by this commit  2007.04.18.1830_1
kris search for other commits by this committer
BROKEN: Does not compile
19 May 2007 20:32:57
Original commit files touched by this commit  2007.04.18.1830_1
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
21 Apr 2007 13:37:39
Original commit files touched by this commit  2007.04.18.1830
miwi search for other commits by this committer
- Update to 2007.04.18.1830
- Respect X11BASE

PR:             111890
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
01 Dec 2006 14:07:50
Original commit files touched by this commit  2006.06.30.1332
laszlof search for other commits by this committer
Respect X11BASE

PR:     ports/106101
Submitted by:   self
Approved by:    Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
Reported by:    pointyhat
24 Sep 2006 18:24:09
Original commit files touched by this commit  2006.06.30.1332
pav search for other commits by this committer
- Fix plugins
- Update to 2006.06.30.1332

PR:             ports/103318
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
06 Jul 2006 21:57:06
Original commit files touched by this commit  2006.03.21.1314
linimon search for other commits by this committer
Remove backquote from BROKEN string to avoid upsetting portsmon code.

Hat:            portmgr
25 May 2006 14:23:50
Original commit files touched by this commit  2006.03.21.1314
arved search for other commits by this committer
Update to 2006.03.21.1314

PR:             97404
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
15 Apr 2006 18:24:01
Original commit files touched by this commit  2005.12.30.0934.2
arved search for other commits by this committer
Update to 2005.12.30.0934.2

PR:             94302
Submitted by:   maintainer
13 Feb 2006 10:24:18
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Change `NOT_FOR_ARCHS' with `if ARCH then BROKEN'

Noticed by:     danfe
Approved by:    garga (mentor)
09 Feb 2006 15:58:54
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Mark NOT_FOR_ARCHS=sparc64, maintainer did not fix the build for 7 days
after kris' mail

Approved by:    garga (mentor)
30 Jan 2006 10:03:13
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Changes to the port:
Author fixed the problem with filename versioning by placing filenames
without version in their name in a subdirectory on the web server.

Changes to the software itself:
-DPIC -fPIC used only for amd64 and ia64, suggested by kris

Approved by:    garga (mentor)
26 Jan 2006 09:35:45
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Update Makefile.FreeBSD_PORT's checksum.

-DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it
compile on amd64.

Approved by:    garga (mentor)
25 Jan 2006 17:34:35
Original commit files touched by this commit  2005.12.30.0934
vd search for other commits by this committer
Add new port science/afni

AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing
3 dimensional images, especially functional MRI images used in
brain mapping research.

WWW: http://afni.nimh.nih.gov/

PR:             ports/90752
Submitted by:   Jason Bacon <bacon@smithers.neuro.mcw.edu>
Reviewed by:    garga (mentor)
Approved by:    garga (mentor)

Number of commits found: 61

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