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Port details
openbabel Chemical toolbox designed to speak the many languages of chemical data
2.4.1_5 science on this many watch lists=11 search for ports that depend on this port Find issues related to this port Report an issue related to this port 2.4.1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2003-01-05 17:06:10
Last Update: 2019-07-26 21:46:57
SVN Revision: 507372
License: GPLv2+
Description:
SVNWeb : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (316 items)
  1. /usr/local/share/licenses/openbabel-2.4.1_5/catalog.mk
  2. /usr/local/share/licenses/openbabel-2.4.1_5/LICENSE
  3. /usr/local/share/licenses/openbabel-2.4.1_5/GPLv2+
  4. bin/babel
  5. bin/obabel
  6. bin/obchiral
  7. bin/obconformer
  8. bin/obdistgen
  9. bin/obenergy
  10. bin/obfit
  11. bin/obgen
  12. bin/obgrep
  13. bin/obgui
  14. bin/obminimize
  15. bin/obprobe
  16. bin/obprop
  17. bin/obrms
  18. bin/obrotamer
  19. bin/obrotate
  20. bin/obspectrophore
  21. bin/obsym
  22. bin/obtautomer
  23. bin/obthermo
  24. bin/roundtrip
  25. include/inchi/inchi_api.h
  26. include/openbabel-2.0/openbabel/alias.h
  27. include/openbabel-2.0/openbabel/atom.h
  28. include/openbabel-2.0/openbabel/atomclass.h
  29. include/openbabel-2.0/openbabel/babelconfig.h
  30. include/openbabel-2.0/openbabel/base.h
  31. include/openbabel-2.0/openbabel/bitvec.h
  32. include/openbabel-2.0/openbabel/bond.h
  33. include/openbabel-2.0/openbabel/bondtyper.h
  34. include/openbabel-2.0/openbabel/builder.h
  35. include/openbabel-2.0/openbabel/canon.h
  36. include/openbabel-2.0/openbabel/chains.h
  37. include/openbabel-2.0/openbabel/chargemodel.h
  38. include/openbabel-2.0/openbabel/chemdrawcdx.h
  39. include/openbabel-2.0/openbabel/chiral.h
  40. include/openbabel-2.0/openbabel/conformersearch.h
  41. include/openbabel-2.0/openbabel/data.h
  42. include/openbabel-2.0/openbabel/data_utilities.h
  43. include/openbabel-2.0/openbabel/descriptor.h
  44. include/openbabel-2.0/openbabel/distgeom.h
  45. include/openbabel-2.0/openbabel/dlhandler.h
  46. include/openbabel-2.0/openbabel/fingerprint.h
  47. include/openbabel-2.0/openbabel/forcefield.h
  48. include/openbabel-2.0/openbabel/format.h
  49. include/openbabel-2.0/openbabel/generic.h
  50. include/openbabel-2.0/openbabel/graphsym.h
  51. include/openbabel-2.0/openbabel/grid.h
  52. include/openbabel-2.0/openbabel/griddata.h
  53. include/openbabel-2.0/openbabel/groupcontrib.h
  54. include/openbabel-2.0/openbabel/inchiformat.h
  55. include/openbabel-2.0/openbabel/internalcoord.h
  56. include/openbabel-2.0/openbabel/isomorphism.h
  57. include/openbabel-2.0/openbabel/json/customwriter.h
  58. include/openbabel-2.0/openbabel/json/json-forwards.h
  59. include/openbabel-2.0/openbabel/json/json.h
  60. include/openbabel-2.0/openbabel/kinetics.h
  61. include/openbabel-2.0/openbabel/lineend.h
  62. include/openbabel-2.0/openbabel/locale.h
  63. include/openbabel-2.0/openbabel/math/align.h
  64. include/openbabel-2.0/openbabel/math/erf.h
  65. include/openbabel-2.0/openbabel/math/matrix3x3.h
  66. include/openbabel-2.0/openbabel/math/spacegroup.h
  67. include/openbabel-2.0/openbabel/math/transform3d.h
  68. include/openbabel-2.0/openbabel/math/vector3.h
  69. include/openbabel-2.0/openbabel/matrix.h
  70. include/openbabel-2.0/openbabel/mcdlutil.h
  71. include/openbabel-2.0/openbabel/mol.h
  72. include/openbabel-2.0/openbabel/molchrg.h
  73. include/openbabel-2.0/openbabel/obconversion.h
  74. include/openbabel-2.0/openbabel/oberror.h
  75. include/openbabel-2.0/openbabel/obiter.h
  76. include/openbabel-2.0/openbabel/obmolecformat.h
  77. include/openbabel-2.0/openbabel/obutil.h
  78. include/openbabel-2.0/openbabel/op.h
  79. include/openbabel-2.0/openbabel/optransform.h
  80. include/openbabel-2.0/openbabel/parsmart.h
  81. include/openbabel-2.0/openbabel/patty.h
  82. include/openbabel-2.0/openbabel/phmodel.h
  83. include/openbabel-2.0/openbabel/plugin.h
  84. include/openbabel-2.0/openbabel/pointgroup.h
  85. include/openbabel-2.0/openbabel/query.h
  86. include/openbabel-2.0/openbabel/rand.h
  87. include/openbabel-2.0/openbabel/reaction.h
  88. include/openbabel-2.0/openbabel/residue.h
  89. include/openbabel-2.0/openbabel/ring.h
  90. include/openbabel-2.0/openbabel/rotamer.h
  91. include/openbabel-2.0/openbabel/rotor.h
  92. include/openbabel-2.0/openbabel/shared_ptr.h
  93. include/openbabel-2.0/openbabel/spectrophore.h
  94. include/openbabel-2.0/openbabel/stereo/bindings.h
  95. include/openbabel-2.0/openbabel/stereo/cistrans.h
  96. include/openbabel-2.0/openbabel/stereo/squareplanar.h
  97. include/openbabel-2.0/openbabel/stereo/stereo.h
  98. include/openbabel-2.0/openbabel/stereo/tetrahedral.h
  99. include/openbabel-2.0/openbabel/stereo/tetranonplanar.h
  100. include/openbabel-2.0/openbabel/stereo/tetraplanar.h
  101. include/openbabel-2.0/openbabel/tautomer.h
  102. include/openbabel-2.0/openbabel/text.h
  103. include/openbabel-2.0/openbabel/tokenst.h
  104. include/openbabel-2.0/openbabel/typer.h
  105. include/openbabel-2.0/openbabel/xml.h
  106. lib/cmake/openbabel2/OpenBabel2Config.cmake
  107. lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake
  108. lib/cmake/openbabel2/OpenBabel2_EXPORTS-release.cmake
  109. lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake
  110. lib/libinchi.so
  111. lib/libinchi.so.0
  112. lib/libinchi.so.0.4.1
  113. lib/libopenbabel.so
  114. lib/libopenbabel.so.5
  115. lib/libopenbabel.so.5.0.0
  116. lib/openbabel/2.4.1/APIInterface.so
  117. lib/openbabel/2.4.1/CSRformat.so
  118. lib/openbabel/2.4.1/MCDLformat.so
  119. lib/openbabel/2.4.1/MNAformat.so
  120. lib/openbabel/2.4.1/PQSformat.so
  121. lib/openbabel/2.4.1/abinitformat.so
  122. lib/openbabel/2.4.1/acesformat.so
  123. lib/openbabel/2.4.1/acrformat.so
  124. lib/openbabel/2.4.1/adfformat.so
  125. lib/openbabel/2.4.1/alchemyformat.so
  126. lib/openbabel/2.4.1/amberformat.so
  127. lib/openbabel/2.4.1/aoforceformat.so
  128. lib/openbabel/2.4.1/asciiformat.so
  129. lib/openbabel/2.4.1/balstformat.so
  130. lib/openbabel/2.4.1/bgfformat.so
  131. lib/openbabel/2.4.1/boxformat.so
  132. lib/openbabel/2.4.1/cacaoformat.so
  133. lib/openbabel/2.4.1/cacheformat.so
  134. lib/openbabel/2.4.1/carformat.so
  135. lib/openbabel/2.4.1/castepformat.so
  136. lib/openbabel/2.4.1/cccformat.so
  137. lib/openbabel/2.4.1/cdxmlformat.so
  138. lib/openbabel/2.4.1/chem3dformat.so
  139. lib/openbabel/2.4.1/chemdoodlejsonformat.so
  140. lib/openbabel/2.4.1/chemdrawcdx.so
  141. lib/openbabel/2.4.1/chemdrawct.so
  142. lib/openbabel/2.4.1/chemkinformat.so
  143. lib/openbabel/2.4.1/chemtoolformat.so
  144. lib/openbabel/2.4.1/cifformat.so
  145. lib/openbabel/2.4.1/cmlformat.so
  146. lib/openbabel/2.4.1/cmlreactformat.so
  147. lib/openbabel/2.4.1/confabreport.so
  148. lib/openbabel/2.4.1/copyformat.so
  149. lib/openbabel/2.4.1/crkformat.so
  150. lib/openbabel/2.4.1/crystal09format.so
  151. lib/openbabel/2.4.1/cssrformat.so
  152. lib/openbabel/2.4.1/daltonformat.so
  153. lib/openbabel/2.4.1/dlpolyformat.so
  154. lib/openbabel/2.4.1/dmolformat.so
  155. lib/openbabel/2.4.1/exyzformat.so
  156. lib/openbabel/2.4.1/fastaformat.so
  157. lib/openbabel/2.4.1/fastsearchformat.so
  158. lib/openbabel/2.4.1/fchkformat.so
  159. lib/openbabel/2.4.1/featformat.so
  160. lib/openbabel/2.4.1/fhformat.so
  161. lib/openbabel/2.4.1/fhiaimsformat.so
  162. lib/openbabel/2.4.1/fingerprintformat.so
  163. lib/openbabel/2.4.1/fpsformat.so
  164. lib/openbabel/2.4.1/freefracformat.so
  165. lib/openbabel/2.4.1/gamessformat.so
  166. lib/openbabel/2.4.1/gamessukformat.so
  167. lib/openbabel/2.4.1/gausscubeformat.so
  168. lib/openbabel/2.4.1/gaussformat.so
  169. lib/openbabel/2.4.1/gausszmatformat.so
  170. lib/openbabel/2.4.1/ghemicalformat.so
  171. lib/openbabel/2.4.1/groformat.so
  172. lib/openbabel/2.4.1/gromos96format.so
  173. lib/openbabel/2.4.1/gulpformat.so
  174. lib/openbabel/2.4.1/hinformat.so
  175. lib/openbabel/2.4.1/inchiformat.so
  176. lib/openbabel/2.4.1/jaguarformat.so
  177. lib/openbabel/2.4.1/lmpdatformat.so
  178. lib/openbabel/2.4.1/lpmdformat.so
  179. lib/openbabel/2.4.1/mdffformat.so
  180. lib/openbabel/2.4.1/mdlformat.so
  181. lib/openbabel/2.4.1/mmcifformat.so
  182. lib/openbabel/2.4.1/mmodformat.so
  183. lib/openbabel/2.4.1/mol2format.so
  184. lib/openbabel/2.4.1/moldenformat.so
  185. lib/openbabel/2.4.1/molproformat.so
  186. lib/openbabel/2.4.1/molreport.so
  187. lib/openbabel/2.4.1/mopacformat.so
  188. lib/openbabel/2.4.1/mpdformat.so
  189. lib/openbabel/2.4.1/mpqcformat.so
  190. lib/openbabel/2.4.1/msiformat.so
  191. lib/openbabel/2.4.1/msmsformat.so
  192. lib/openbabel/2.4.1/nulformat.so
  193. lib/openbabel/2.4.1/nwchemformat.so
  194. lib/openbabel/2.4.1/opendxformat.so
  195. lib/openbabel/2.4.1/orcaformat.so
  196. lib/openbabel/2.4.1/outformat.so
  197. lib/openbabel/2.4.1/painterformat.so
  198. lib/openbabel/2.4.1/pcmodelformat.so
  199. lib/openbabel/2.4.1/pdbformat.so
  200. lib/openbabel/2.4.1/pdbqtformat.so
  201. lib/openbabel/2.4.1/plugin_charges.so
  202. lib/openbabel/2.4.1/plugin_descriptors.so
  203. lib/openbabel/2.4.1/plugin_fingerprints.so
  204. lib/openbabel/2.4.1/plugin_forcefields.so
  205. lib/openbabel/2.4.1/plugin_ops.so
  206. @comment lib/openbabel/2.4.1/png2format.so
  207. lib/openbabel/2.4.1/pngformat.so
  208. lib/openbabel/2.4.1/pointcloudformat.so
  209. lib/openbabel/2.4.1/posformat.so
  210. lib/openbabel/2.4.1/povrayformat.so
  211. lib/openbabel/2.4.1/pqrformat.so
  212. lib/openbabel/2.4.1/pubchem.so
  213. lib/openbabel/2.4.1/pubchemjsonformat.so
  214. lib/openbabel/2.4.1/pwscfformat.so
  215. lib/openbabel/2.4.1/qchemformat.so
  216. lib/openbabel/2.4.1/reportformat.so
  217. lib/openbabel/2.4.1/rsmiformat.so
  218. lib/openbabel/2.4.1/rxnformat.so
  219. lib/openbabel/2.4.1/shelxformat.so
  220. lib/openbabel/2.4.1/siestaformat.so
  221. lib/openbabel/2.4.1/smilesformat.so
  222. lib/openbabel/2.4.1/smileyformat.so
  223. lib/openbabel/2.4.1/stlformat.so
  224. lib/openbabel/2.4.1/svgformat.so
  225. lib/openbabel/2.4.1/textformat.so
  226. lib/openbabel/2.4.1/thermoformat.so
  227. lib/openbabel/2.4.1/tinkerformat.so
  228. lib/openbabel/2.4.1/titleformat.so
  229. lib/openbabel/2.4.1/turbomoleformat.so
  230. lib/openbabel/2.4.1/unichemformat.so
  231. lib/openbabel/2.4.1/vaspformat.so
  232. lib/openbabel/2.4.1/viewmolformat.so
  233. lib/openbabel/2.4.1/xedformat.so
  234. lib/openbabel/2.4.1/xmlformat.so
  235. lib/openbabel/2.4.1/xsfformat.so
  236. lib/openbabel/2.4.1/xyzformat.so
  237. lib/openbabel/2.4.1/yasaraformat.so
  238. lib/openbabel/2.4.1/zindoformat.so
  239. lib/python3.6/site-packages/_openbabel.so
  240. lib/python3.6/site-packages/openbabel.py
  241. lib/python3.6/site-packages/pybel.py
  242. libdata/pkgconfig/openbabel-2.0.pc
  243. man/man1/babel.1.gz
  244. man/man1/obabel.1.gz
  245. man/man1/obchiral.1.gz
  246. man/man1/obconformer.1.gz
  247. man/man1/obenergy.1.gz
  248. man/man1/obfit.1.gz
  249. man/man1/obgen.1.gz
  250. man/man1/obgrep.1.gz
  251. man/man1/obgui.1.gz
  252. man/man1/obminimize.1.gz
  253. man/man1/obprobe.1.gz
  254. man/man1/obprop.1.gz
  255. man/man1/obrotamer.1.gz
  256. man/man1/obrotate.1.gz
  257. man/man1/obspectrophore.1.gz
  258. man/man1/roundtrip.1.gz
  259. share/openbabel/2.4.1/MACCS.txt
  260. share/openbabel/2.4.1/SMARTS_InteLigand.txt
  261. share/openbabel/2.4.1/UFF.prm
  262. share/openbabel/2.4.1/aromatic.txt
  263. share/openbabel/2.4.1/atomization-energies.txt
  264. share/openbabel/2.4.1/atomtyp.txt
  265. share/openbabel/2.4.1/babel_povray3.inc
  266. share/openbabel/2.4.1/bondtyp.txt
  267. share/openbabel/2.4.1/eem.txt
  268. share/openbabel/2.4.1/eem2015ba.txt
  269. share/openbabel/2.4.1/eem2015bm.txt
  270. share/openbabel/2.4.1/eem2015bn.txt
  271. share/openbabel/2.4.1/eem2015ha.txt
  272. share/openbabel/2.4.1/eem2015hm.txt
  273. share/openbabel/2.4.1/eem2015hn.txt
  274. share/openbabel/2.4.1/element.txt
  275. share/openbabel/2.4.1/eqeqIonizations.txt
  276. share/openbabel/2.4.1/fragments.txt
  277. share/openbabel/2.4.1/gaff.dat
  278. share/openbabel/2.4.1/gaff.prm
  279. share/openbabel/2.4.1/ghemical.prm
  280. share/openbabel/2.4.1/isotope-small.txt
  281. share/openbabel/2.4.1/isotope.txt
  282. share/openbabel/2.4.1/logp.txt
  283. share/openbabel/2.4.1/mpC.txt
  284. share/openbabel/2.4.1/mmff94.ff
  285. share/openbabel/2.4.1/mmff94s.ff
  286. share/openbabel/2.4.1/mmffang.par
  287. share/openbabel/2.4.1/mmffbndk.par
  288. share/openbabel/2.4.1/mmffbond.par
  289. share/openbabel/2.4.1/mmffchg.par
  290. share/openbabel/2.4.1/mmffdef.par
  291. share/openbabel/2.4.1/mmffdfsb.par
  292. share/openbabel/2.4.1/mmffoop.par
  293. share/openbabel/2.4.1/mmffpbci.par
  294. share/openbabel/2.4.1/mmffprop.par
  295. share/openbabel/2.4.1/mmffs_oop.par
  296. share/openbabel/2.4.1/mmffs_tor.par
  297. share/openbabel/2.4.1/mmffstbn.par
  298. share/openbabel/2.4.1/mmfftor.par
  299. share/openbabel/2.4.1/mmffvdw.par
  300. share/openbabel/2.4.1/mr.txt
  301. share/openbabel/2.4.1/patterns.txt
  302. share/openbabel/2.4.1/phmodel.txt
  303. share/openbabel/2.4.1/plugindefines.txt
  304. share/openbabel/2.4.1/psa.txt
  305. share/openbabel/2.4.1/qeq.txt
  306. share/openbabel/2.4.1/resdata.txt
  307. share/openbabel/2.4.1/ringtyp.txt
  308. share/openbabel/2.4.1/space-groups.txt
  309. share/openbabel/2.4.1/splash.png
  310. share/openbabel/2.4.1/superatom.txt
  311. share/openbabel/2.4.1/svgformat.script
  312. share/openbabel/2.4.1/templates.sdf
  313. share/openbabel/2.4.1/torlib.txt
  314. share/openbabel/2.4.1/types.txt
  315. @postexec /usr/sbin/service ldconfig restart > /dev/null
  316. @postunexec /usr/sbin/service ldconfig restart > /dev/null
Collapse this list.
Dependency lines:
  • openbabel>0:science/openbabel
  • libinchi.so:science/openbabel
Conflicts:
CONFLICTS_INSTALL:
  • babel-*
Conflicts Matches:
There are no Conflicts Matches for this port. This is usually an error.
To install the port: cd /usr/ports/science/openbabel/ && make install clean
To add the package: pkg install openbabel
PKGNAME: openbabel
Flavors: there is no flavor information for this port.
distinfo:

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. cmake : devel/cmake
  2. ninja : devel/ninja
  3. eigen3.pc : math/eigen3
  4. python3.6 : lang/python36
Runtime dependencies:
  1. python3.6 : lang/python36
Library dependencies:
  1. libxml2.so : textproc/libxml2
  2. libwx_baseu-3.0.so : x11-toolkits/wxgtk30
This port is required by:
for Build
  1. science/libghemical
for Libraries
  1. science/gchemutils
  2. science/ghemical
  3. science/kalzium
  4. science/molsketch
  5. science/v_sim
  6. science/xdrawchem

Deleted ports which required this port:

Expand this list of 4 deleted ports
  1. biology/xdrawchem*
  2. science/avogadro*
  3. science/kalzium-kde4*
  4. science/py-openbabel*
  5. Collapse this list of deleted ports.
for Run
  1. science/luscus
  2. science/xcrysden

Configuration Options

USES:

Master Sites:
  1. http://cytranet.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  2. http://downloads.sourceforge.net/project/openbabel/openbabel/2.4.1/
  3. http://excellmedia.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  4. http://freefr.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  5. http://jaist.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  6. http://kent.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  7. http://nchc.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  8. http://netcologne.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  9. http://netix.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  10. http://superb-dca2.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  11. http://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  12. http://ufpr.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  13. http://vorboss.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  14. https://cytranet.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  15. https://downloads.sourceforge.net/project/openbabel/openbabel/2.4.1/
  16. https://excellmedia.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  17. https://freefr.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  18. https://jaist.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  19. https://kent.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  20. https://nchc.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  21. https://netcologne.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  22. https://netix.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  23. https://superb-dca2.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  24. https://superb-sea2.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  25. https://ufpr.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/
  26. https://vorboss.dl.sourceforge.net/project/openbabel/openbabel/2.4.1/

Number of commits found: 63

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
26 Jul 2019 20:46:57
Original commit files touched by this commit  2.4.1_5
Revision:507372
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
12 Jul 2019 02:25:07
Original commit files touched by this commit  2.4.1_4
Revision:506432
linimon search for other commits by this committer
Prepare for powerpc-on-clang by deleting hard-coded tests for libstdc++.so
as a stand-in for "are we running on gcc".

For people already testing powerpc on clang, it is possible that they
already have both compilers in base.  Thus, the assumption that "gcc is
in base" (e.g.  libstdc++.so exists) always means "force use of GCC" is
already broken.  It will be for everyone on -CURRENT once the switch is
made.

While here, standardize on compiler:c++11-lang instead of -lib (they are
equivalent these days), pet portlint, and do some other cleanup.

Approved by:	portmgr (tier-2 blanket)
10 Apr 2019 06:18:32
Original commit files touched by this commit  2.4.1_4
Revision:498530
antoine search for other commits by this committer
Bump a few PORTREVISIONs after r498529

With hat:	portmgr
26 Dec 2018 09:06:35
Original commit files touched by this commit  2.4.1_3
Revision:488363
tcberner search for other commits by this committer
Update math/eigen3 to 3.3.7

- http://eigen.tuxfamily.org/index.php?title=ChangeLog#Eigen_3.3.6
- http://eigen.tuxfamily.org/index.php?title=ChangeLog#Eigen_3.3.7
25 Dec 2018 20:25:40
Original commit files touched by this commit  2.4.1_2
Revision:488341
tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
12 Dec 2018 01:35:36
Original commit files touched by this commit  2.4.1_2
Revision:487272
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
11 Dec 2018 23:19:09
Original commit files touched by this commit  2.4.1_1
Revision:487265
antoine search for other commits by this committer
Unbreak
11 Dec 2018 07:50:24
Original commit files touched by this commit  2.4.1_1
Revision:487224
yuri search for other commits by this committer
science/openbabel: fix build with GCC-based architectures

While here, also add USES=gnome.

PR:		233912
Submitted by:	Piotr Kubaj <pkubaj@anongoth.pl>
12 Jun 2018 07:39:34
Original commit files touched by this commit  2.4.1_1
Revision:472233
yuri search for other commits by this committer
science/openbabel: Take maintainership; Add the GUI option using wxWidgets-3.0

GUI is "on" by default because that's what CMakeLists.txt suggests as default.
Also improve helpers use.
02 Jan 2018 16:49:24
Original commit files touched by this commit  2.4.1
Revision:457914
tcberner search for other commits by this committer
New USES=eigen

  Usage:
    USES=eigen:<version>[,<type>]

    version: 2 or 3 (required)
    type:    build (default), run

  For example:
    USES=eigen:2,build,run
  will add a BUILD- and RUN_DEPENDS on math/eigen2, and
    USES=eigen:3
  will add a BUILD_DEPENDS on math/eigen3.

* Convert the existing ports to use it
  - biology/iqtree: remove run time dependency (seemed not to be needed)
  - graphics/movit: remove run time dependency (seemed not to be needed)
  - science/avogadro: add run time dependeny (installed cmake file requires it
to be present)

Reviewed by:	rakuco, mat
Differential Revision:	https://reviews.freebsd.org/D13702
24 May 2017 01:43:01
Original commit files touched by this commit  2.4.1
Revision:441557
dbaio search for other commits by this committer
science/openbabel: Update to 2.4.1

Patches removed:
  patch-git_c3abbdda, patch-gcc5-support (Integrated upstream)
  patch-scripts__CMakeLists.txt (Builds without it)

While here, set LICENSE and simplify BUILD_DEPENDS.

Changes: https://github.com/openbabel/openbabel/releases

PR:	219382
Submitted by:	Yuri Victorovich <yuri@rawbw.com>
Approved by:	garga (mentor)
Differential Revision:	https://reviews.freebsd.org/D10837
30 Apr 2017 04:35:11
Original commit files touched by this commit  2.3.2_2
Revision:439789
linimon search for other commits by this committer
Provide more descriptive error messages for ports failing on powerpc64.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
21 Jan 2017 23:12:18
Original commit files touched by this commit  2.3.2_2
Revision:432091
jbeich search for other commits by this committer
science/openbabel: unbreak with GCC >= 6

GCC defaults to C++14 since 6.0 which no longer converts istream to
bool by default. Instead of fixing just downgrade to C++98.

PR:		216036
20 Oct 2016 15:58:13
Original commit files touched by this commit  2.3.2_2
Revision:424339
rakuco search for other commits by this committer
Reassign makc's ports back to the pool.

See "Maintainer Reset" in
https://www.freebsd.org/portmgr/policies_contributors.html. makc's last commit
was in March 31st (r412218), and his ports have been timing out since at least
July (r418155).

I also emailed him 2 weeks ago and have received no response so far.
21 Apr 2016 16:43:15
Original commit files touched by this commit  2.3.2_2
Revision:413746
swills search for other commits by this committer
many ports: mark broken on powerpc64
01 Apr 2016 14:25:18
Original commit files touched by this commit  2.3.2_2
Revision:412349
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
25 Aug 2015 10:03:09
Original commit files touched by this commit  2.3.2_2
Revision:395231
makc search for other commits by this committer
Convert my ports to new options helpers
18 Apr 2015 13:49:18
Original commit files touched by this commit  2.3.2_2
Revision:384227
marino search for other commits by this committer
science/openbabel: Support gcc5 (taken from upstream)

This was really painful.   I consolidated numerous shared_ptr (TR1)
patches to a single big patch (including moving part of an existing
patch to it because the target needed yet another change).

Tested on FreeBSD 8/i386 and FreeBSD 10/amd64.  This was previously
built on DragonFly with gcc 4.7, but libstdc++ incompatibilities caused
avogadro to break which eventually broken kde4 metapackage.

Those openbabel guys are long overdue for a new release, this was a bit
absurd although maybe some clever sed'ding could have reduced the patch
count.

Approved by:	blanket (gcc5 & DF breakage)
12 Nov 2014 18:48:53
Original commit files touched by this commit  2.3.2_1
Revision:372500
antoine search for other commits by this committer
Cleanup plist
24 Oct 2014 16:50:43
Original commit files touched by this commit  2.3.2_1
Revision:371453
mva search for other commits by this committer
- Convert ports of science/ and security to new USES=python

Approved by:	portmgr (implicit)
16 Apr 2014 18:28:50
Original commit files touched by this commit  2.3.2_1
Revision:351411
zeising search for other commits by this committer
The FreeBSD x11@ and graphics team proudly presents
a zeising, kwm production, with help from dumbbell, bdrewery:

NEW XORG ON FREEBSD 9-STABLE AND 10-STABLE

This update switches over to use the new xorg stack by default on FreeBSD 9
and 10 stable, on osversions where vt(9) is available.
It is still possible to use the old stack by specifying WITHOUT_NEW_XORG in
/etc/make.conf .
FreeBSD 8-STABLE and released versions of FreeBSD still use
the old version.
A package repository with binary packages for new xorg will
be available soon.

This patch also contains updates of libxcb and related ports, pixman, as well
(Only the first 15 lines of the commit message are shown above View all of this commit message)
13 Nov 2013 15:49:25
Original commit files touched by this commit  2.3.2
Revision:333701
rakuco search for other commits by this committer
Add upstream patch to fix the build with libc++.

The original commit has been slightly tuned so that it builds with the code
in the latest stable release.

Approved by:	makc (maintainer)
17 Oct 2013 18:49:09
Original commit files touched by this commit  2.3.2
Revision:330663
makc search for other commits by this committer
- Add dependency on pkgconfig when building with cairo support [1]
- Support staging
- Use option helpers

Reported by:	Andreas Nilsson via mail [1]
20 Sep 2013 22:48:31
Original commit files touched by this commit  2.3.2
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
14 Aug 2013 22:35:54
Original commit files touched by this commit  2.3.2
Revision:324744  Sanity Test Failure
ak search for other commits by this committer
- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)
22 Mar 2013 20:06:15
Original commit files touched by this commit  2.3.2
Revision:314960
makc search for other commits by this committer
- convert USE_CMAKE to USES
- while here clean up some ports from CMAKE_VERBOSE, which is intended
  for users

Approved by:	portmgr (miwi)
11 Dec 2012 14:19:54
Original commit files touched by this commit  2.3.2
Revision:308694
makc search for other commits by this committer
science/openbabel:
- Update openbabel to 2.3.2
- Switch to CMake build system
- Add PYTHON and CAIRO options
- Don't rename babel binary, mark conflict with ancient biology/babel

science/py-openbabel:
- Merge py-openbabel to openbabel

other:
- chase openbabel update
09 Nov 2011 15:26:04
Original commit files touched by this commit  2.2.3

miwi search for other commits by this committer
- Remove WITH_FBSD10_FIX, is no longer needed
29 Oct 2011 08:45:31
Original commit files touched by this commit  2.2.3

miwi search for other commits by this committer
- Fix build on FreeBSD 10
11 Aug 2011 19:20:17
Original commit files touched by this commit  2.2.3
  Sanity Test Failure
kwm search for other commits by this committer
Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since
mid 2008.

PR:             ports/159624
Submitted by:   Ruslan Mahmatkhanov <cvs-src@yandex.ru>
03 Jul 2011 13:22:25
Original commit files touched by this commit  2.2.3

ohauer search for other commits by this committer
 - remove MD5
04 Dec 2010 07:34:27
Original commit files touched by this commit  2.2.3

ade search for other commits by this committer
Sync to new bsd.autotools.mk
26 Jun 2010 19:17:44
Original commit files touched by this commit  2.2.3

makc search for other commits by this committer
Update to 2.2.3

Feature safe:   yes
11 Nov 2009 16:12:14
Original commit files touched by this commit  2.2.2

marcel search for other commits by this committer
Builds on ia64.

Approved by: makc
07 Oct 2009 21:11:39
Original commit files touched by this commit  2.2.2

makc search for other commits by this committer
Respect LOCALBASE.

Reported by:    QATty
10 Aug 2009 17:13:43
Original commit files touched by this commit  2.2.2

makc search for other commits by this committer
Update to 2.2.2
Mark MAKE_JOBS_SAFE
02 Aug 2009 19:36:34
Original commit files touched by this commit  2.2.1

mezz search for other commits by this committer
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
-Update libtool and libltdl to 2.2.6a.
-Remove devel/libtool15 and devel/libltdl15.
-Fix ports build with libtool22/libltdl22.
-Bump ports that depend on libltdl22 due to shared library version change.
-Explain what to do update in the UPDATING.

It has been tested with GNOME2, XFCE4, KDE3, KDE4 and other many wm/desktop
and applications in the runtime.

With help:      marcus and kwm
Pointyhat-exp:  a few times by pav
Tested by:      pgollucci, "Romain Tartière" <romain@blogreen.org>, and
                a few MarcusCom CVS users. Also, I might have missed a few.
Repocopy by:    marcus
Approved by:    portmgr
28 Jul 2009 11:45:09
Original commit files touched by this commit  2.2.1

pav search for other commits by this committer
- Update boost to 1.39
- Split boost port to separate components, with boost-all metaport

PR:             ports/137054
Submitted by:   Alexander Churanov <churanov.port.maintainer@gmail.com>
(maintainer)
26 Apr 2009 14:49:08
Original commit files touched by this commit  2.2.1

makc search for other commits by this committer
Update to 2.2.1
21 Feb 2009 11:31:28
Original commit files touched by this commit  2.2.0_1

makc search for other commits by this committer
Use my @FreeBSD.org email for the rest of my ports
21 Jul 2008 10:26:09
Original commit files touched by this commit  2.2.0_1

miwi search for other commits by this committer
- s/PORTREVSION/PORTREVISION
18 Jul 2008 15:49:08
Original commit files touched by this commit  2.2.0

miwi search for other commits by this committer
- Fix build on 6.3

PR:             125728
Submitted by:   Max Brazhnikov <makc@issp.ac.ru>
08 Jul 2008 13:57:50
Original commit files touched by this commit  2.2.0

miwi search for other commits by this committer
- Fix build on 6.X

Reported by:    ionbot, pavbot
Approved by:    maintainer via im
07 Jul 2008 00:01:07
Original commit files touched by this commit  2.2.0

beech search for other commits by this committer
- Update to 2.2.0
- Pass maintainership to submitter

PR:             ports/125335
Submitted by:   Max Brazhnikov <makc@issp.ac.ru>
20 Aug 2007 09:05:30
Original commit files touched by this commit  2.1.1

miwi search for other commits by this committer
- Update to 2.1.1

PR:             115397
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>
23 Jul 2007 09:36:52
Original commit files touched by this commit  2.1.0

rafan search for other commits by this committer
- Set --mandir and --infodir in CONFIGURE_ARGS if the configure script
  supports them.  This is determined by running ``configure --help'' in
  do-configure target and set the shell variable _LATE_CONFIGURE_ARGS
  which is then passed to CONFIGURE_ARGS.
- Remove --mandir and --infodir in ports' Makefile where applicable
  Few ports use REINPLACE_CMD to achieve the same effect, remove them too.
- Correct some manual pages location from PREFIX/man to MANPREFIX/man
- Define INFO_PATH where necessary
- Document that .info files are installed in a subdirectory relative to
  PREFIX/INFO_PATH and slightly change add-plist-info to use INFO_PATH and
  subdirectory detection.

PR:             ports/111470
Approved by:    portmgr
Discussed with: stas (Mk/*), gerald (info related stuffs)
Tested by:      pointyhat exp run
24 May 2007 22:21:02
Original commit files touched by this commit  2.1.0

pav search for other commits by this committer
- Update to 2.1.0
15 Aug 2006 00:56:24
Original commit files touched by this commit  2.0.2

clsung search for other commits by this committer
- s,INSTALLS_SHLIB,USE_LDCONFIG,g
- these include misc/ multimedia/ net/ net-mgmt/ net-im/
  net-p2p/ palm/ print/ science/ maintained by ports@

PR:             ports/101916
Submitted by:   Gea-Suan Lin <gslin_AT_gslin dot org>
01 Aug 2006 19:05:03
Original commit files touched by this commit  2.0.2

shaun search for other commits by this committer
- Upgrade to 2.0.2 [1]
- portlint(1) tweak

PR:             ports/101196
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>
20 Apr 2006 05:37:26
Original commit files touched by this commit  2.0.1

sem search for other commits by this committer
- Update to version 2.0.1

PR:             ports/96010
Submitted by:   Ports Fury
23 Feb 2006 10:40:45
Original commit files touched by this commit  2.0.0_1

ade search for other commits by this committer
Conversion to a single libtool environment.

Approved by:    portmgr (kris)
19 Jan 2006 23:56:25
Original commit files touched by this commit  2.0.0

kris search for other commits by this committer
BROKEN on ia64: gcc internal error during build
18 Dec 2005 10:37:25
Original commit files touched by this commit  2.0.0

lawrance search for other commits by this committer
Update to 2.0.0.

PR:             ports/90558
Submitted by:   Ports Fury
25 Nov 2005 17:44:39
Original commit files touched by this commit  1.100.2

pav search for other commits by this committer
- Add SHA256
15 Nov 2005 06:52:12
Original commit files touched by this commit  1.100.2

ade search for other commits by this committer
Mass-conversion to the USE_AUTOTOOLS New World Order.  The code present
in bsd.autotools.mk essentially makes this a no-op given that all the
old variables set a USE_AUTOTOOLS_COMPAT variable, which is parsed in
exactly the same way as USE_AUTOTOOLS itself.

Moreover, USE_AUTOTOOLS has already been extensively tested by the GNOME
team -- all GNOME 2.12.x ports use it.

Preliminary documentation can be found at:
        http://people.FreeBSD.org/~ade/autotools.txt

which is in the process of being SGMLized before introduction into the
Porters Handbook.

Light blue touch-paper.  Run.
13 Apr 2005 12:21:55
Original commit files touched by this commit  1.100.2

vs search for other commits by this committer
USE_LIBTOOL instead of local patch
04 Mar 2004 13:03:10
Original commit files touched by this commit  1.100.2

pav search for other commits by this committer
- Update to 1.100.2

PR:             ports/63756
Submitted by:   Ports Fury
27 Jul 2003 04:59:48
Original commit files touched by this commit  1.100.1

marcus search for other commits by this committer
Add a dependency on gnometarget to quiet a configure warning.
29 Jun 2003 19:34:00
Original commit files touched by this commit  1.100.1

marcus search for other commits by this committer
* Update to 1.100.1
* Remove patches in favor of --program-prefix=open
* Install the .pc file in the correct location

PR:     53845
Submitted by:   Pav Lucistnik <pav@oook.cz>
05 Apr 2003 08:11:47
Original commit files touched by this commit  1.100.0

edwin search for other commits by this committer
forgot to add the patches.
05 Apr 2003 08:10:44
Original commit files touched by this commit  1.100.0

edwin search for other commits by this committer
science/openbabel and biology/babel binary names conflict

        renamed the binaries and manpages of science/openbabel to
        openbabel instead of babel.

PR:             ports/47109
Submitted by:   Glenn Johnson <gjohnson@srrc.ars.usda.gov>
20 Feb 2003 18:57:37
Original commit files touched by this commit  1.100.0

knu search for other commits by this committer
De-pkg-comment.
05 Jan 2003 17:04:59
Original commit files touched by this commit  1.100.0

ijliao search for other commits by this committer
add openbabel 1.100.0
Chemistry file translation program

Number of commits found: 63

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