Ports marked with a ^* actually reside within another category but have science listed as a secondary category.

py-ruffus Lightweight library for computational pipelines

2.8.4_1 2.8.4_1Version of this port present on the latest quarterly branch.

Maintainer: kai@FreeBSD.org

Port Added: 2019-07-11 16:51:11

Also Listed In: python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}ruffus>0:science/py-ruffus@${PY_FLAVOR}

py-sarpy Read, write and process complex SAR and other associated data

1.3.64_2 1.3.64_2Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2024-09-05 06:22:07

Also Listed In: python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}sarpy>0:science/py-sarpy@${PY_FLAVOR}

py-scikit-fuzzy Fuzzy logic toolkit for SciPy

0.5.0_3 0.5.0_2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2015-12-31 13:41:26

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scikit-fuzzy>0:science/py-scikit-fuzzy@${PY_FLAVOR}

py-scikit-learn Machine learning algorithms for python

1.9.0_1 1.9.0_1Version of this port present on the latest quarterly branch.

Maintainer: wen@FreeBSD.org

Port Added: 2012-10-19 12:24:11

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scikit-learn>0:science/py-scikit-learn@${PY_FLAVOR}

py-scikit-optimize Sequential model-based optimization toolbox

0.10.2_2 0.10.2_2Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2020-04-21 19:33:30

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scikit-optimize>0:science/py-scikit-optimize@${PY_FLAVOR}

py-scikit-sparse Sparse matrix package

0.4.16_4 0.4.16_3Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2015-06-14 12:39:21

Also Listed In: python

License: BSD2CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scikit-sparse>0:science/py-scikit-sparse@${PY_FLAVOR}

py-scimath Scientific and Mathematical calculations

5.0.0_3 5.0.0_2Version of this port present on the latest quarterly branch.

Maintainer: wen@FreeBSD.org

Port Added: 2011-02-20 03:54:19

Also Listed In: math python

License: BSD3CLAUSE LGPL3

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scimath>0:science/py-scimath@${PY_FLAVOR}

py-scipy Scientific tools for Python

1.17.1_3,1 1.17.1_3,1Version of this port present on the latest quarterly branch.

Maintainer: python@FreeBSD.org

Port Added: 2004-08-26 08:44:44

People watching this port, also watch:: libogg, squid, python, py311-matplotlib, pftop

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}

py-scipy-stubs Type annotations for SciPy

1.18.0.1 Package not present on quarterly.This port was created during this quarter. It will be in the next quarterly branch but not the current one.

Maintainer: yuri@FreeBSD.org

Port Added: 2026-07-09 05:21:52

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scipy-stubs>0:science/py-scipy-stubs@${PY_FLAVOR}

py-scoria Lightweight molecule manipulation codebase

1.0.5_4 1.0.5_3Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2017-11-16 18:27:54

Also Listed In: python

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}scoria>0:science/py-scoria@${PY_FLAVOR}

py-sdf Simple SDF mesh generation in Python

0.1_6 0.1_5Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2022-11-19 16:45:11

People watching this port, also watch:: vtk9, SparseBitSet, py312-cysignals, python

Also Listed In: cad python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}sdf>0:science/py-sdf@${PY_FLAVOR}

py-seekpath Obtain, visualize k-vector coefficients in crystal Brillouin zone

2.2.1_2 2.2.1_2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2025-01-25 01:45:06

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}seekpath>0:science/py-seekpath@${PY_FLAVOR}

py-segregation Analytics for spatial and non-spatial segregation in Python

2.5.5 2.5.4_1Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2021-01-03 20:36:33

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}segregation>0:science/py-segregation@${PY_FLAVOR}

py-segyio Python binding for segyio, the seismic data library

1.9.14 1.9.14Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2020-11-08 02:56:16

Also Listed In: python

License: LGPL3+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}segyio>0:science/py-segyio@${PY_FLAVOR}

py-signac Manage large and heterogeneous data spaces on the file system

2.4.0 2.4.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2023-05-04 16:27:06

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}signac>0:science/py-signac@${PY_FLAVOR}

py-sklearn-pandas Pandas integration with sklearn

2.2.0_4 2.2.0_4Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2022-01-28 23:30:27

Also Listed In: python

License: BSD2CLAUSE ZLIB

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}sklearn-pandas>0:science/py-sklearn-pandas@${PY_FLAVOR}

py-skrebate Relief-based feature selection algorithms

0.62_4 0.62_4Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2021-04-25 20:39:28

Also Listed In: python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}skrebate>0:science/py-skrebate@${PY_FLAVOR}

py-spaghetti Analysis of Network-constrained Spatial Data

1.7.6_2 1.7.6_2Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2021-01-03 20:35:02

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}spaghetti>0:science/py-spaghetti@${PY_FLAVOR}

py-spglib Library for finding and handling crystal symmetries (python binding)

2.7.0_2 2.7.0_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-06-15 22:28:37

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}spglib>0:science/py-spglib@${PY_FLAVOR}

py-spml Spatial machine learning

0.2.2 0.2.2Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2026-06-28 14:24:39

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}spml>0:science/py-spml@${PY_FLAVOR}

py-symfc Generate symmetrized force constants

1.7.3 1.7.2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2024-11-15 09:21:21

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}symfc>0:science/py-symfc@${PY_FLAVOR}

py-tensorflow Computation using data flow graphs for scalable machine learning

2.21.0_3 2.21.0_3Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2017-08-15 12:08:16

People watching this port, also watch:: vigenere, tmux, libjxl, python311

Also Listed In: python

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}tensorflow>0:science/py-tensorflow@${PY_FLAVOR}

py-thewalrus Open source library for hafnian calculation

0.21.0_3 0.21.0_2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-06-01 03:45:10

Also Listed In: python

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}thewalrus>0:science/py-thewalrus@${PY_FLAVOR}

py-tobler Areal Interpolation

0.14.0 0.14.0Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2021-01-03 20:37:06

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}tobler>0:science/py-tobler@${PY_FLAVOR}

py-trainstation Convenient training of linear models

1.1_3 1.1_2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-03-07 20:15:55

Also Listed In: python

License: GPLv3+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}trainstation>0:science/py-trainstation@${PY_FLAVOR}

py-trx-python Experiments with new file format for tractography

0.3_1 0.3Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2023-12-17 19:40:40

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}trx-python>0:science/py-trx-python@${PY_FLAVOR}

py-tweedledum Library for analysis, compilation, synthesis of quantum circuits

1.2.0 1.1.1.20221123_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-08-08 03:54:26

Also Listed In: python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}tweedledum>0:science/py-tweedledum@${PY_FLAVOR}

py-vedo Python module for scientific analysis and visualization of 3D objects

2026.6.1_1 2026.6.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2023-01-19 23:06:11

Also Listed In: graphics python

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}vedo>0:science/py-vedo@${PY_FLAVOR}

py-veusz Scientific plotting package

4.2.1 4.2.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-03-01 12:17:13

License: GPLv2

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}veusz>0:science/py-veusz@${PY_FLAVOR}

py-vispy High-performance interactive 2D/3D data visualization library

0.15.2_2^* 0.15.2_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2024-09-07 06:27:13

Also Listed In: graphics python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}vispy>0:graphics/py-vispy@${PY_FLAVOR}

py-xbout Collect data from BOUT++ runs in python using xarray

0.3.8 0.3.8Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-12-25 01:24:23

Also Listed In: education

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}xbout>0:science/py-xbout@${PY_FLAVOR}

py-zfp High throughput library for compressed floating-point arrays

1.0.1_2^* 1.0.1_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-11-01 10:39:14

Also Listed In: devel

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}zfp>0:devel/py-zfp@${PY_FLAVOR}

pybrain Swiss Army knife for neural networking

0.3.3_6 0.3.3_6Version of this port present on the latest quarterly branch.

Maintainer: wen@FreeBSD.org

Port Added: 2009-11-19 13:45:09

Also Listed In: python

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• pybrain>0:science/pybrain

pynn Simulator-independent language for building neuronal network models

0.12.3_3 0.12.3_2Version of this port present on the latest quarterly branch.

Maintainer: wen@FreeBSD.org

Port Added: 2010-05-19 05:32:10

Also Listed In: python

License: CeCILL

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• ${PYTHON_PKGNAMEPREFIX}pynn>0:science/pynn@${PY_FLAVOR}

q Molecular Dynamics (MD) tools

6.0_2 6.0_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-05-24 01:57:06

License: GPLv2+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• q>0:science/q

qbox First-principles molecular dynamics code

1.78.6 1.78.6Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-08-31 06:45:42

License: GPLv2+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qbox>0:science/qbox

qcl Quantum computer simulator

0.6.7 0.6.7Version of this port present on the latest quarterly branch.

There is no maintainer for this port.

Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org

Port Added: 2006-01-24 01:09:06

Also Listed In: math

License: GPLv2+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qcl>0:science/qcl

qiskit-aer Quantum circuits simulator submodule of the Qiskit framework

0.16.0.1_5 0.16.0.1_5Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2020-03-12 01:06:03

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qiskit-aer>0:science/qiskit-aer

qmcpack Many-body ab initio Quantum Monte Carlo code for quantum chemistry

4.1.0_3 4.1.0_3Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-08-20 07:45:08

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qmcpack>0:science/qmcpack

qt6-quick3dphysics High-level API for physics simulation

6.11.1 6.11.1Version of this port present on the latest quarterly branch.

Maintainer: kde@FreeBSD.org

Port Added: 2023-10-24 21:27:41

License: LGPL21

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qt6-quick3dphysics>0:science/qt6-quick3dphysics

quantum-espresso Package for research in electronic structure, simulation, optimization

7.5_2 7.5_2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-07-18 21:52:13

License: GPLv2

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• quantum-espresso>0:science/quantum-espresso

quantum-espresso-pseudopotentials Pseudopotentials for use with Quantum Espresso

g20220916 g20220916Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-11-21 22:35:03

License: GPLv2

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• quantum-espresso-pseudopotentials>0:science/quantum-espresso-pseudopotentials

quantum-jet Cross-platform header-only library for simulating quantum circuits

0.2.2.2_5 0.2.2.2_5Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-05-31 20:03:06

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• quantum-jet>0:science/quantum-jet

qwalk Quantum Monte Carlo package for quantum chemistry computations

1.0.1.300_6 1.0.1.300_6Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-08-21 04:31:32

License: GPLv2

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• qwalk>0:science/qwalk

rdkit Collection of cheminformatics and machine-learning software

2025.09.2_2 2025.09.2_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-03-22 08:24:27

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rdkit>0:science/rdkit

rmf Library to support reading and writing of Rich Molecular Format files

1.7.1 1.7.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-06-29 09:04:35

Also Listed In: graphics

License: APACHE20

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rmf>0:science/rmf

root Data analysis framework made at CERN

6.38.00_3^* 6.38.00_3Version of this port present on the latest quarterly branch.

Maintainer: erik@tenku.dk

Port Added: 2004-04-18 13:53:10

People watching this port, also watch:: squid, python, dnetc, exim

Also Listed In: devel math parallel python

License: LGPL21

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• root>0:devel/root

rubygem-ai4r Various Ruby artificial intelligence algorithm implementations

1.13 1.13Version of this port present on the latest quarterly branch.

Maintainer: ruby@FreeBSD.org

Port Added: 2011-03-25 12:08:52

Also Listed In: rubygems

License: MPL11

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-ai4r>0:science/rubygem-ai4r

rubygem-cdo Ruby binding to CDO (Climate Data Operators)

1.5.1_1 1.5.1_1Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2014-09-13 15:20:39

Also Listed In: rubygems

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-cdo>0:science/rubygem-cdo

rubygem-rgeo Geospatial data library for Ruby (RGeo)

3.1.0 3.1.0Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2018-04-07 16:33:07

Also Listed In: rubygems

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-rgeo>0:science/rubygem-rgeo

rubygem-rgeo-geojson GeoJSON formatting and parsing in Ruby

2.2.0 2.2.0Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2018-04-07 16:33:43

Also Listed In: rubygems

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-rgeo-geojson>0:science/rubygem-rgeo-geojson

rubygem-rgeo-proj4 Proj.4 extension for RGeo

4.0.0_8 4.0.0_8Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2018-04-07 16:34:19

Also Listed In: rubygems

License: MIT

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-rgeo-proj4>0:science/rubygem-rgeo-proj4

rubygem-rgeo-shapefile RGeo module for reading the ESRI shapefile format

3.1.0_1 3.1.0_1Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2018-04-07 16:34:03

Also Listed In: rubygems

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-rgeo-shapefile>0:science/rubygem-rgeo-shapefile

rubygem-ruby-netcdf Ruby interface to the NetCDF scientific IO library

0.8.0_1 0.8.0_1Version of this port present on the latest quarterly branch.

Maintainer: ruby@FreeBSD.org

Port Added: 2015-05-24 15:36:00

Also Listed In: rubygems

License: BSD2CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• rubygem-ruby-netcdf>0:science/rubygem-ruby-netcdf

salome-configuration Salome Project: Multi-physics simulations: Configuration

9.15.0 9.15.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2023-07-04 09:33:05

License: LGPL21+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• salome-configuration>0:science/salome-configuration

salome-kernel Salome Project: Multi-physics simulations: Kernel

9.11.0_7 9.11.0_7Version of this port present on the latest quarterly branch.

BROKEN: fails to build with NumPy 2.x
IGNORE: is marked as broken: fails to build with NumPy 2.x

Maintainer: yuri@FreeBSD.org

Port Added: 2023-07-04 09:33:09

License: LGPL21+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• salome-kernel>0:science/salome-kernel

scidavis Scientific data analysis and visualization

2.9.2_3 2.9.2_3Version of this port present on the latest quarterly branch.

Maintainer: makc@FreeBSD.org

Port Added: 2018-12-23 21:40:42

License: GPLv2+

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• scidavis>0:science/scidavis

sciplot Modern C++ scientific plotting library powered by gnuplot

0.3.1 0.3.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-11-16 07:36:06

Also Listed In: graphics

License: MIT

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sciplot-plotting-library>0:science/sciplot

scotch Package for graph and mesh partitioning and sparse matrix ordering

6.0.4.a7_7^* 6.0.4.a7_7Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2006-02-03 22:23:39

People watching this port, also watch:: vtk9, SparseBitSet, py312-cysignals, python

Also Listed In: cad

License: CeCILL_C

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• scotch>0:cad/scotch

seacas Sandia Engineering Analysis Code Access System (SEACAS)

2025.10.14_1 2025.10.14_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2024-10-31 20:36:09

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• seacas>0:science/seacas

segyio Library to interact with SEG-Y & Seismic Unix formatted seismic data

1.9.14 1.9.14Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2020-11-08 00:33:52

License: LGPL3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• segyio>0:science/segyio

serac High order nonlinear thermomechanical simulation code

g20260327 g20260327Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-09-05 08:18:21

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• serac>0:science/serac

shelxle Graphical user interface for small-molecule structure refinement

1.0.1703 1.0.1703Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2021-01-14 19:14:47

License: LGPL21

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• shelxle>0:science/shelxle

siconos Simulation framework for nonsmooth dynamical systems

4.5.0_4 4.5.0_4Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2021-08-11 22:54:08

License: APACHE20

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• siconos>0:science/siconos

siesta Program to perform efficient electronic structure calculations

5.4.2 5.4.2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-09-03 17:51:50

License: GPLv3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• siesta>0:science/siesta

sigrok-cli Framework for hardware logic analyzers, CLI client

0.7.2_2 0.7.2_2Version of this port present on the latest quarterly branch.

Maintainer: bofh@FreeBSD.org

Port Added: 2014-01-03 00:13:28

People watching this port, also watch:: libsigrok, coreutils, python, monit, tmux

Also Listed In: cad

License: GPLv3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sigrok-cli>0:science/sigrok-cli

sigrok-firmware Sigrok firmware

20150123 20150123Version of this port present on the latest quarterly branch.

Maintainer: bofh@FreeBSD.org

Port Added: 2014-08-03 22:37:57

People watching this port, also watch:: python, py311-pycparser, sysinfo

License: not specified in port

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sigrok-firmware>0:science/sigrok-firmware

sigrok-firmware-fx2lafw Cypress FX2 firmware for hardware logic analyzers

0.1.7 0.1.7Version of this port present on the latest quarterly branch.

Maintainer: bofh@FreeBSD.org

Port Added: 2014-08-03 22:24:58

People watching this port, also watch:: python, py311-pycparser, sysinfo

License: GPLv2

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sigrok-firmware-fx2lafw>0:science/sigrok-firmware-fx2lafw

sigrok-firmware-utils Sigrok firmware extraction utilities

20140418_3 20140418_3Version of this port present on the latest quarterly branch.

Maintainer: bofh@FreeBSD.org

Port Added: 2014-08-03 22:09:19

People watching this port, also watch:: python, py311-pycparser, sysinfo

License: GPLv3+

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sigrok-firmware-utils>0:science/sigrok-firmware-utils

silo Mesh and field I/O library and scientific database

4.12.0 4.12.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2008-07-20 21:19:48

People watching this port, also watch:: policyd2, rc, py311-cjkwrap, py311-darts.util.lru, monit

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• silo>0:science/silo

silq Silq from ETH Zuerich

20250624_2^* 20250624_2Version of this port present on the latest quarterly branch.

Maintainer: se@FreeBSD.org

Port Added: 2020-06-18 06:55:37

Also Listed In: lang math

License: BSL

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• silq>0:lang/silq

simbody Multibody dynamics library for (bio)mechanical systems simulation

3.7_9 3.7_9Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-11-15 06:47:08

Also Listed In: biology

License: APACHE20

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• simbody>0:science/simbody

simgrid Simulator of the behavior of large-scale distributed systems

4.1 4.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2019-05-16 16:00:33

License: LGPL21

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• SimGrid>0:science/simgrid

simint Obara-Saika (OS) method of calculating electron repulsion integrals

0.8 0.8Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-10-08 07:53:03

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• simint>0:science/simint

simlib SIMulation LIBrary for C++ programming language

3.09 3.09Version of this port present on the latest quarterly branch.

Maintainer: fuz@FreeBSD.org

Port Added: 2004-11-27 21:39:12

License: LGPL20

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• simlib>0:science/simlib

simple-dftd3 Reimplementation of the DFT-D3 program

1.4.0 1.4.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-01-18 02:45:19

License: GPLv3

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• simple-dftd3>0:science/simple-dftd3

simsmith Java-based Smith Chart program

9.9_3 9.9_3Version of this port present on the latest quarterly branch.

Maintainer: hamradio@FreeBSD.org

Port Added: 2014-07-03 21:02:18

Also Listed In: hamradio

License: not specified in port

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• simsmith>0:science/simsmith

sirius Domain specific library for electronic structure calculations

7.11.1_1 7.11.1_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-08-27 04:27:26

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• sirius-quantum-chemistry>0:science/sirius

smoldyn Biochemical simulator for molecular diffusion, surface interactions

2.75_1 2.75Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2019-06-09 03:26:30

License: LGPL3

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• smoldyn>0:science/smoldyn

sparta Gas simulator: SPARTA DSMC software package

2024.09.4 2024.09.4Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-11-12 03:03:09

License: GPLv2

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• sparta-dsmc>0:science/sparta

spglib C library for finding and handling crystal symmetries

2.7.0 2.7.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-06-15 17:42:41

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• spglib>0:science/spglib

spheral Environment for hydrodynamical & gravitational numerical simulations

2025.12.0_1 2025.12.0_1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-12-11 00:45:10

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• spheral>0:science/spheral

sprng Scalable Parallel Pseudo Random Number Generators Library

5.0_4^* 5.0_4Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2020-12-11 15:36:14

People watching this port, also watch:: vtk9, SparseBitSet, py312-cysignals, python

Also Listed In: math

License: CC-BY-NC-SA-4.0

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• SPRNG>0:math/sprng

step KDE interactive physics simulator

26.04.3 26.04.2Version of this port present on the latest quarterly branch.

Maintainer: kde@FreeBSD.org

Port Added: 2011-10-17 00:10:04

People watching this port, also watch:: python, xerces-c3, linux-c7-avahi-libs, py311-pycparser

Also Listed In: education kde kde-applications

License: LGPL20

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• step>0:science/step

sz3 Modular Error-bounded Lossy Compression Framework for Scientific Datasets

3.3.2_2 3.3.2_2Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2025-02-03 15:57:18

License: BSD4CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• sz3>0:science/sz3

tachyon Multiproccess ray tracing system

0.98.9_2^* 0.98.9_2Version of this port present on the latest quarterly branch.

Maintainer: arrowd@FreeBSD.org

Port Added: 2020-03-28 20:15:41

Also Listed In: graphics

License: BSD3CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• tachyon>0:graphics/tachyon

tblite Light-weight tight-binding framework

0.6.0 0.6.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-01-18 02:45:25

People watching this port, also watch:: gnunet, zapret2, agate, indi, qelectrotech

License: LGPL3+

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• tblite>0:science/tblite

teem Libraries for representing, processing and visualizing scientific data

1.11.0 1.11.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-09-02 06:43:42

License: LGPL21

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• teem>0:science/teem

tfel Code generation tool dedicated to material knowledge

5.1.0_1 5.1.0Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2016-11-11 16:49:35

People watching this port, also watch:: vtk9, SparseBitSet, py312-cysignals, python

License: GPLv3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• tfel-mfront>0:science/tfel

tfel-edf Code generation tool dedicated to material knowledge

3.2.1.1_11 3.2.1.1_10Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2020-11-26 20:46:44

People watching this port, also watch:: vtk9, SparseBitSet, py312-cysignals, python

License: GPLv3

USE_RC_SUBR (Service Scripts)

• no SUBR information found for this port

Dependency lines:

• tfel-mfront-edf>0:science/tfel-edf

thermofun Code for calculating thermodynamic properties of materials

0.5.1 0.5.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2021-02-02 00:48:29

License: LGPL3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• thermofun>0:science/thermofun

tinker General purpose molecular modelling package

26.1.2 26.1.2Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2018-10-07 00:19:53

License: TINKER

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• tinker>0:science/tinker

trilinos Solver for multi-physics engineering and scientific problems

16.2.0_1 16.2.0Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-07-08 16:33:05

License: BSD3CLAUSE LGPL20

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• trilinos>0:science/trilinos

ttk Topology ToolKit: Topological data analysis and visualization

1.3.0_5 1.3.0_4Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-11-04 05:33:28

License: BSD4CLAUSE

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• ttk>0:science/ttk

tweedledum Library for analysis, compilation, synthesis of quantum circuits

1.1.1 1.1.1Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-08-08 03:54:08

Also Listed In: python

License: MIT

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• tweedledum>0:science/tweedledum

udunits Library for manipulating units of physical quantities

2.2.28 2.2.28Version of this port present on the latest quarterly branch.

Maintainer: sunpoet@FreeBSD.org

Port Added: 2005-01-14 21:53:09

People watching this port, also watch:: units, coreutils, pdfcrack, laspack

Also Listed In: math

License: UCAR_UNIDATA

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• udunits>0:science/udunits

ugene Integrated bioinformatics toolkit

53.1_1^* 53.1_1Version of this port present on the latest quarterly branch.

Maintainer: makc@FreeBSD.org

Port Added: 2013-02-23 04:51:12

Also Listed In: biology

License: GPLv2+

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• ugene>0:biology/ugene

ukrmol+ Code to compute electron and positron scattering from molecules

3.2_7 3.2_7Version of this port present on the latest quarterly branch.

Maintainer: yuri@FreeBSD.org

Port Added: 2022-05-25 02:09:08

License: GPLv3

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• ukrmol+>0:science/ukrmol+

v_sim Visualization of atomic structures

3.9.1_3 3.9.1_3Version of this port present on the latest quarterly branch.

Maintainer: thierry@FreeBSD.org

Port Added: 2005-12-10 21:46:15

People watching this port, also watch:: mutt, python, postfix, kicad

License: CeCILL

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• v_sim>0:science/v_sim

vdt Fast and inline implementations of mathematical functions

0.4.6^* 0.4.6Version of this port present on the latest quarterly branch.

Maintainer: erik@tenku.dk

Port Added: 2022-12-26 08:18:08

Also Listed In: devel math

License: LGPL3+

USE_RC_SUBR (Service Scripts)

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Dependency lines:

• vdt>0:math/vdt